Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu09g2000 ATGAGTTGCTGGAAGAGTTTTCCGGCAATGTGTTCTCTCCTTCTTCTGTTTCCTCTGTTTCTTCACTCGTCCCTGGTGCTGGTATCTGCTCAGGGATCTAATAGTACGGCTCTATGGCAGACTCTGAGTGGAAATGCTCCATTTGTTGTGGCTCGCGGTGGATTTTCAGGGCTTTTTCCTGATTCATGTGGAGTTGCCTACAATTTTGCAGTTATGGTTAGTGTTCCTGATGTGATCTTATGGTGCGATGTGCAATTAACCAAAGATGGAGTTGGAATTTGTCTTCCGGATCTGAGGCTTGACAATGCTACTGATGCTCCGACTATTCTAGGGACAAACCGCAGCAATGTCTATCTTGTTAATGGTGTCCGTACTAAGGGATTGTTTACGGTCAATTTCAATTTCAAAGAACTGGAAAATGTTTCTCTTGTTCAAGGAATCTATTCTCGAACTAATAAGTTCGATGGCAATGAGTTTGTTATTCTCACTCCTGAAGATGTGGTTAATCAGTTCAAGCCTCCAGGATTTTGGCTAAATATTCAGCATGATGTGTTCTTCACGCAACATAACGTGAGCATGAGGAACTTTGTACTTTCTGTATCCAGAAGCATCATTGTTAACTATATATCATCACCAGAGGTCGGATTTCTCAGAAGTATAGCTGCAAGGATTCCCCGCACAACAAAGTTGATCCTTCGGGTCTTAGGACCCACTGATACTGAGGTTACCACCAACCAGACATATGCCTCTCTCTTAGGAAATCTCACCTTTATCAAGACATTTGCTTCTGGAATTCTTGTACCTAAGACTTATATATGGCCCATTAGTAACGATGGTTACATACAACAACCTCAAACCTCTCTTGTTTCTGATGCTCACAAAGCACAGCTGGAAATTTTTGCATCAGACTTCTTTAGTGACCTTCCATTAAGCTACAATTACAGTTACGATCCCGTTACTGAATACCTGTCTTACTTTGACAATGGTAAATTTTCAGTTGATGGTGTGCTCACTGATTTCCCCATTTCTCCATCGTCAGCTATTGACTGTTTTGCTCATTTGGATAAGAACGCCAAAAGTCAAGCCAAGCCTTTGGTTATTTCAAAATTTGGAGCTAGTGGAGACTTTCCTGCTTGCACAGATTTGGCATACTCGAATGCCATTTCAGATGGTGTTGAAGTACTCGACTGTCCTGTTCAAATAACCAAAGACGGGATACCATTTTGCATGAGCTCAATTAATCTCATCGACAGCACAACAATATCTCAATCACCATTCATTAACCGTTCAAAAAAAATTCCCGAAATTAGTCCTAACGAAGGAATTTTTGCTTTTGACTTAACATGGGAAGAGATTCAAGGCCTAACCCCGTCAATATTGAACCCTTATTCGAAGTTCACGTTGTTCCGAAATCCAAGGTTCAGAAACAGTGGAAAATTCATAACACTACCTGATTTCTTGGCCTTCGCAAAGAATGCAAGCACTCTTTCTGGTGTCTTGATCCATATTGAGCATGCAGCCTACCTTGCTAAGGATCAGGGTTTAAGTGTAACTGATGCGGTCTTTGGTTCCTTAAGCAAAGCTGGTTATGATAATCAGACAGCCCTTAAAGTATTGATTCAATCTCCAGATAGTGCTGTTCTAAAAAAATTTAAACAGGAAAATAACAGTTACGAGCTTGTTTATCAAGTTGACATGTCAATTGGGGATGTGCTCAATACAACTGTTGTGGACATAAAGAGTTTTGCCAACTCTGTGACTATCAGCAAGCCCTCTGTCTTCCCTGAAAATCAGCTATTTCTCACGGGATCTACAGATGTTGTGAAGAAGCTGCAAGCACTTAAGCTCTCTGTATATGTGGAAACCTTCGACAATGAATTTGTCTCTCAAGCATGGGATTTCTTCTCCGATGCAACTGTAGAGATCAACTCATATGTTTTGGGAGCCAACATTGATGGAGTCATCACCAGCTTCCCAAAGACATCTGCTAGATATAAAAAGAACCGATGTTTATCAATGAAAGAAACACCTAATTACATGAGCCCTGTCCAGCCTGGTAGCTTGTTGCAACTTGTTACTCCAGACTACCTGCCTCCGAAGACAGCTCCGAGCCCGGTTTTGAATGACAAAGACGTAGCTGAGCCACCATTGCCTCCGGTTTCGGCCAAAGCCCCAGCACCTGCTGTCGACAGTGGCCCTACAGCAGCATCTCCAACTTCTAAACCCAATGGACAACCTAAGCTTGGAGCTGGAGCAGGCTTCTTGTTCTTGAACCTTGCCATACTTTCCATTGCTCTTCTTCCATTCTGA 2310 42.21 MSCWKSFPAMCSLLLLFPLFLHSSLVLVSAQGSNSTALWQTLSGNAPFVVARGGFSGLFPDSCGVAYNFAVMVSVPDVILWCDVQLTKDGVGICLPDLRLDNATDAPTILGTNRSNVYLVNGVRTKGLFTVNFNFKELENVSLVQGIYSRTNKFDGNEFVILTPEDVVNQFKPPGFWLNIQHDVFFTQHNVSMRNFVLSVSRSIIVNYISSPEVGFLRSIAARIPRTTKLILRVLGPTDTEVTTNQTYASLLGNLTFIKTFASGILVPKTYIWPISNDGYIQQPQTSLVSDAHKAQLEIFASDFFSDLPLSYNYSYDPVTEYLSYFDNGKFSVDGVLTDFPISPSSAIDCFAHLDKNAKSQAKPLVISKFGASGDFPACTDLAYSNAISDGVEVLDCPVQITKDGIPFCMSSINLIDSTTISQSPFINRSKKIPEISPNEGIFAFDLTWEEIQGLTPSILNPYSKFTLFRNPRFRNSGKFITLPDFLAFAKNASTLSGVLIHIEHAAYLAKDQGLSVTDAVFGSLSKAGYDNQTALKVLIQSPDSAVLKKFKQENNSYELVYQVDMSIGDVLNTTVVDIKSFANSVTISKPSVFPENQLFLTGSTDVVKKLQALKLSVYVETFDNEFVSQAWDFFSDATVEINSYVLGANIDGVITSFPKTSARYKKNRCLSMKETPNYMSPVQPGSLLQLVTPDYLPPKTAPSPVLNDKDVAEPPLPPVSAKAPAPAVDSGPTAASPTSKPNGQPKLGAGAGFLFLNLAILSIALLPF 769
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 36081506 36088613 + CmPI595203_09g020000.1 Cmu09g2000 425229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu09g2000 769 MobiDBLite consensus disorder prediction 703 744 - -
Cmu09g2000 769 Pfam Glycerophosphoryl diester phosphodiesterase family 82 301 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
Cmu09g2000 769 Pfam Glycerophosphoryl diester phosphodiesterase family 371 660 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
Cmu09g2000 769 Gene3D Phosphatidylinositol (PI) phosphodiesterase 45 344 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Cmu09g2000 769 Gene3D Phosphatidylinositol (PI) phosphodiesterase 362 665 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Cmu09g2000 769 FunFam Glycerophosphodiester phosphodiesterase GDPDL3 362 666 - -
Cmu09g2000 769 ProSiteProfiles GP-PDE domain profile. 47 348 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
Cmu09g2000 769 SUPERFAMILY PLC-like phosphodiesterases 46 342 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Cmu09g2000 769 CDD GDPD_SHV3_repeat_1 47 347 - -
Cmu09g2000 769 CDD GDPD_SHV3_repeat_2 364 665 - -
Cmu09g2000 769 FunFam Glycerophosphodiester phosphodiesterase GDPDL3 45 347 - -
Cmu09g2000 769 SUPERFAMILY PLC-like phosphodiesterases 363 665 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Cmu09g2000 769 ProSiteProfiles GP-PDE domain profile. 364 666 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
Cmu09g2000 769 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 15 730 - GO:0008889(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g1866 Cmu-Chr1:32235186 Cmu09g2000 Cmu-Chr9:36081506 1.50E-157 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu09g2000 - - - 0.0