Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu09g2119 ATGGCGGCCAAATCTGTATCTCAAAATCGAATCAGAGCCAAACTCCATTTCTTCTATGCAATTCTTCTGCTGCAGTTTGCTACCTTCGGATTGGCAGCCACAGCCAAGCTTCATCCAGAAGAAGTGAAAGCTTTGAAAGAGATCGAGAAGAAGATAGGGAAAAACGATTGGAATTTTAGCGTAGATCCTTGCAGTGGAGAAGGAAAATGGCGAGTCGTTAATGGAAGAAAAGGATTCGAAAGCTCCGTCACCTGTGATTGCTCTTTCAACCACAACTCCACTTGCCGTATCGTCGCCATCATATGCCAAAATTTACTGTGTTTTCAAATTTGGGTTGATTTTGATTTGGCCGTGCAATTCTTCCCTGAATTTCCCGGGAAAAAGATAGTAGCTGCACCTGCAAGACAGCAATACGAAAGAAGTGATCAGCCATTTGACCCGCTTGGCTTAATGATTGGGAAGGGTGAACTGAGTTTTATGCCACCACAACCCTTGCCCATTAGCTCGAGATTCATCCACGCTCCAAATGGAGCGATGCAATGGCGGAGCTTCTCGGCTGCCTCTGTTGATATTGATATCGTCGGAGGTCCATTTAGATCCCTTATACATATCTCAAAAGCTCTGAAGTCCCAGAATCTATCAGGCATTGTGCCACCAGAGTTTTCCAAGCTTCGCTTCCTCAAACAGCTAGACCTCAGTCGAAACTGTCTCACTGGTTCTATCCCTTCACAATGGGCTACCATGCGATTGGTAGAACTCTCTTTCATGGGAAACAAATTGTCGGGCCCATTCCCGAAAGTTCTTACTAATATCACCACCCTCAGAAACCTGAGCATCGAAGGAAATCAATTTTCCGGCCAAATTCCGCCAGAGGTCGGAAAACTAATTAGTTTGGAAAAATTAGTTCTGTCATCCAATGGCCTCACCGGAGAATTGCCTAAAGCACTAGCGAAATTGTCGAACTTAACTGATGTGAGGATAAGTGACAACAACTTCTCTGGAAAGATACCTGAGTTCATTAGTAATTGGGCACAGATTGAAAAACTGCATATACAAGGCTGCTCCCTCGAGGGGCCTATACCCTTAAGTATCTCCACCATGACAAGTTTAACTGATCTGAGAATATCTGACTTAAAAGGTGGAAGGTCTCCTTTTCCGTCGTTGAGCAAAATGAAATCCCTGAAGACTCTGATACTGAGGAAGTGCTTAATTTTTGGAGAAGTCCCGAAATACATCGGGGACATGAAAAAATTGAAAAACTTAGACCTCAGTTACAATGACTTGACTGGCGAAGTTCCTGCATCTTTAGAACGACTGGAAAAAATAGATTACATAATTTTGACAGGAAACAAGCTCAATGGAATTATTCCTGGTTGGATTTTAGGAAGCAACAAGAACGTAGATCTTTCTAATAACAACTTCACTTGGGAAAACTCAAGCCCAGCTGAGTGTCCTCGTGGTAGTGTAACTAGAATCCATCCCTGCCTAAAAAGGAACTTTCCGTGTTCTGCATCAAGGGAACAGCATCACTACTCATTGCACATTAACTGTGGCGATAAAGAAGCATTTGTAAGGGGTGAAAGGTATGAAGCGGATAGAGAAGGTGCTTCAATGTTTTATACTGGTCAGAATTGGGCTTTTAGCAGCACGGGAAGCTTTATGGACAATGATGTTGATGCTGATAACTACATCATAACAAATACATCTGCTCTTTCAAATGTCTCTGTGACTGATTCAGAACTGTACACAAAAGCAAGAAACTCTCCTCAATCTCTTACATACTATGGGCTATGTCTCATAAATGGGAATTATACTGTTAAACTCCACTTTGCAGAAATTGTATTTATAAATGACAGTTCATTCAACAGCCTGGGGAGGCGAGTTTTTGATGTGTACATTCAGGAAAAGCTAGTCCTGAAAGATTTTGATATAGAACATGAAGCAGGGGGTACTGGTAAGCCCATTATGAAAACATTTACTGCAGTTGTCACAAGTCATACATTGAAAATCCATTTCTACTGGGCTGGAAGAGGAACAACAGGAATTCCACTTAGAGGAAATTATGGTCCTCTGATATCAGCTATTTCTGTAGATCCCAATTTTACACCTCCTAAGGACCACGTGAAGAAGCATCACACCATCATAATTATTGGGACAGCAGCAGCAGCTTTTGTTCTCCTTCTTCTGGTGCTATGCATTATGAGGAGGAACGGATGGCTGGGAGGCAAGGCATCCGTATATAAAGAGCTTAGAGGTATAGATCTGCAAACAGGATTATTTACAATAAGACAGATTAAAGCAGCCACTAAAAATTTTGATGCTGCGAACAAAGTTGGGGAAGGTGGTTTTGGTGCAGTTTACAAGGGTCTCTTGTCAGATGGTACTATAATTGCAGTCAAGCAGCTCTCGTCAAAATCAAAGCAAGGAAATCGAGAATTTGTTAATGAAATAGGCATGATATCCGCACTGCAACATCCAAATCTTGTCAAGCTTTATGGATGTTGTGTTGATGGGAACCAACTAATGTTGATTTATGAATACATGGAAAATAATTGCTTATCACGTGCCCTTTTCAGAAATGACCCAGCTTCTAAATTGAGATTGGACTGGCCCACCAGGCAGAAAATTTGTCTGGGAATAGCTAGAGGTTTGGCCTATCTGCATGAGGAGTCAAGACTAAAAATCGTACATAGGGATATCAAGACAAGTAATGTATTGCTTGATAAGGATTTCAATGCTAAAATTTCTGATTTTGGCTTGGCTAAGCTTCATGAAGATGACAATACCCATATCAGCACTAGGGTTGCTGGAACCATTGGTTATATGGCTCCTGAATATGCAATGCGTGGATGCTTGACCTGCAAAGCTGATGTTTATAGCTTTGGAGTTGTTGCCCTGGAAATTGTCAGTGGCAAAAGCAATACCAACTACAGGCCTAAAGAGGAATTTGTTTACCTTCTTGATTGGGCATCTGTTCTGCAAGAAAAGGGAAGCCTATTGGAGTTGGTGGATCCAGCCTTGGGCTCAGATTATTCATCAGAAGAAGCAATGGTGATGCTGAATGTGGCTCTCCTCTGCACCAACGCATCCCCAACTCTGCGGCCTCTAATGTCCCAAGTCGTCAGCATGCTCGAAGGTCGAACTCCAGTGCAAGCACTTCTTTCTGACCCAGGATTTTCAGCCATCAATTCCAAATTAAAGGCACTCAGAAATCACTTTTGGCAACAATTGAGCCCAACTCACAGTTTATCATTGGACGATTTCCCTAGTGATTCCTTGAGTTCGAATGTGGACCCGGAGGCAGAAGAGAATTACAATCTTGTAGGACCCCATTCTGTTAACATGACTGGAACAAATTAG 3360 42.26 MAAKSVSQNRIRAKLHFFYAILLLQFATFGLAATAKLHPEEVKALKEIEKKIGKNDWNFSVDPCSGEGKWRVVNGRKGFESSVTCDCSFNHNSTCRIVAIICQNLLCFQIWVDFDLAVQFFPEFPGKKIVAAPARQQYERSDQPFDPLGLMIGKGELSFMPPQPLPISSRFIHAPNGAMQWRSFSAASVDIDIVGGPFRSLIHISKALKSQNLSGIVPPEFSKLRFLKQLDLSRNCLTGSIPSQWATMRLVELSFMGNKLSGPFPKVLTNITTLRNLSIEGNQFSGQIPPEVGKLISLEKLVLSSNGLTGELPKALAKLSNLTDVRISDNNFSGKIPEFISNWAQIEKLHIQGCSLEGPIPLSISTMTSLTDLRISDLKGGRSPFPSLSKMKSLKTLILRKCLIFGEVPKYIGDMKKLKNLDLSYNDLTGEVPASLERLEKIDYIILTGNKLNGIIPGWILGSNKNVDLSNNNFTWENSSPAECPRGSVTRIHPCLKRNFPCSASREQHHYSLHINCGDKEAFVRGERYEADREGASMFYTGQNWAFSSTGSFMDNDVDADNYIITNTSALSNVSVTDSELYTKARNSPQSLTYYGLCLINGNYTVKLHFAEIVFINDSSFNSLGRRVFDVYIQEKLVLKDFDIEHEAGGTGKPIMKTFTAVVTSHTLKIHFYWAGRGTTGIPLRGNYGPLISAISVDPNFTPPKDHVKKHHTIIIIGTAAAAFVLLLLVLCIMRRNGWLGGKASVYKELRGIDLQTGLFTIRQIKAATKNFDAANKVGEGGFGAVYKGLLSDGTIIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCVDGNQLMLIYEYMENNCLSRALFRNDPASKLRLDWPTRQKICLGIARGLAYLHEESRLKIVHRDIKTSNVLLDKDFNAKISDFGLAKLHEDDNTHISTRVAGTIGYMAPEYAMRGCLTCKADVYSFGVVALEIVSGKSNTNYRPKEEFVYLLDWASVLQEKGSLLELVDPALGSDYSSEEAMVMLNVALLCTNASPTLRPLMSQVVSMLEGRTPVQALLSDPGFSAINSKLKALRNHFWQQLSPTHSLSLDDFPSDSLSSNVDPEAEENYNLVGPHSVNMTGTN 1119
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 37315976 37327205 + CmPI595203_09g021190.1 Cmu09g2119 425348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu09g2119 1119 FunFam Leucine-rich repeat receptor protein kinase EMS1 216 309 - -
Cmu09g2119 1119 CDD STKc_IRAK 778 1046 - -
Cmu09g2119 1119 Gene3D Phosphorylase Kinase; domain 1 743 847 - -
Cmu09g2119 1119 ProSiteProfiles Protein kinase domain profile. 772 1054 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu09g2119 1119 Pfam Leucine rich repeat 393 452 IPR001611 GO:0005515(InterPro)
Cmu09g2119 1119 ProSitePatterns Serine/Threonine protein kinases active-site signature. 895 907 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu09g2119 1119 Gene3D Transferase(Phosphotransferase) domain 1 848 1053 - -
Cmu09g2119 1119 Pfam Malectin domain 512 695 IPR021720 -
Cmu09g2119 1119 SMART serkin_6 772 1042 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu09g2119 1119 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 343 490 - -
Cmu09g2119 1119 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 510 700 - -
Cmu09g2119 1119 SUPERFAMILY L domain-like 209 502 - -
Cmu09g2119 1119 Gene3D Ribonuclease Inhibitor 317 512 IPR032675 -
Cmu09g2119 1119 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 741 847 - -
Cmu09g2119 1119 Gene3D Ribonuclease Inhibitor 179 315 IPR032675 -
Cmu09g2119 1119 Pfam Protein tyrosine and serine/threonine kinase 775 986 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu09g2119 1119 SUPERFAMILY Protein kinase-like (PK-like) 757 1045 IPR011009 -
Cmu09g2119 1119 FunFam Putative LRR receptor-like serine/threonine-protein kinase 848 1056 - -
Cmu09g2119 1119 ProSitePatterns Protein kinases ATP-binding region signature. 778 800 IPR017441 GO:0005524(InterPro)
Cmu09g2119 1119 Pfam Leucine Rich Repeat 321 343 IPR001611 GO:0005515(InterPro)
Cmu09g2119 1119 Pfam Leucine Rich Repeat 274 295 IPR001611 GO:0005515(InterPro)
Cmu09g2119 1119 Pfam Leucine Rich Repeat 297 319 IPR001611 GO:0005515(InterPro)
Cmu09g2119 1119 Pfam Leucine Rich Repeat 227 246 IPR001611 GO:0005515(InterPro)
Cmu09g2119 1119 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 30 1059 IPR051824 -
Cmu09g2119 1119 Gene3D - 513 699 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu09g2119 Cmu-Chr9:37315976 Cmu11g1727 Cmu-Chr11:29398884 2.10E-199 dispersed
Cmu09g2119 Cmu-Chr9:37315976 Cmu11g1728 Cmu-Chr11:29414431 1.60E-199 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75817 PF07714 PK_Tyr_Ser-Thr 3.20E-49 CL0016 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu09g2119 - - - 0.0