Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu09g2127 ATGCTCTCTTTTTTAGCTGCAATGCTAATAATATCCATTGTTCTAGTCTTGAGGAGCAATAAGAGAAGCAAAAATATACCACCTGGGCAAATGGGTCTTCCTTGGATTGGCGAAACAATGGCTTTTTACAAAGCCCAACGTAAAAACAGAGTATTTGAAGACTTTGTTAGGCCTCGAGTGGCTAAACATGGCAAAATCTTCAAAACAAGCTTAATGGGATCTCCAACAGTGGTTGTAAATGGAGCTGAAGCCAATCGATTTTTCTTGTCAAATGAGTTTAAGTTAGTGGTGAGTTCATGGCCATCGGGTTCTGTTCAGTTGATGGGTGAAGAATGCATTATGCAAAAGCAAGGTGAAAGGCACAGAATTGTGCGTGCTCTTATTGCTGCAAGTCTTTCTAGTTCGAGTCTTGAAGTTATGATGCCTAAATTGTGCAATACAATTAAGGTTTATTTGGAAACTAAATGGGTTGGTTGTGACACAATTGGTCTATTCCATTCGGCAAAAGTATTGACTTTTACCATAGTGTTTGAGTGTTTGATGGGTATTAAAGTGGAGCCACGTGTGTTGATGACATTTGAGAGAGTTTTGGAGGGTGTTTTTGTACCACCGCTCAGGTTTCCAGGCACAAGGTTTTCAAGAGCCAAGAAAGCAAGGTTGGAGATAGAGAAAATGCTAAGGGAAGTGGTGAGAGAGAAGAGGAGGGGAATTGAAGGAAAGTTAGAAGAAGAAGAAGAAGAAGAATGTGGGTCATTGCTTTCAAGGATGGTGAGAGCAATGATAAGAGGGGAGATCAATGAAACGGAAGTCATAGACAATGTGGTTTTGCTTGTTTTTGCAGCTCATGATACAACTTCCTTTGCCATTGCCATGACTTTCAAGATGTTAGCTCAACATTCAAACTGCTACTCACTTCTTCTCCAGGAACACACTGACATAGTGAGAAGCAAGGGGCCAAGCCAGAATTTGACGATGGAAGATATAAAGAAGATGAAATATACTTGGCAAGTAGCTCGTGAGAGCATTAGACTGTTTCCTCCTATATTTGGTTCTTTCAGGAAAGCCATTTCAGACATTGAATATGAGAGATTTTTCATTCCCAAAGGATGGAAGGTGAAAATTTCAATAAATTCTTCTGCTGTTTCTTTACATCAGTTGATATATCCTGCAGTAAATTGTTGTCCAGAAATGACCATCATTTTACCTCGAATCATTTTGGTTGCATGGCAGGTATTGTGGACGACGTATGGAACACATTACGAAGAAGAGTACTTTGAAGATCCATTGAGTTTCAAGCCAAGCAGATTTGAGGAACCTGTTTCTCAGTATGTTTATGTTCCATTTGGAGGAGGGCCAAGAGCTTGTGCAGGCTACCAGCTGGCGAAATTGAACATCCTCATCTTTATACATTTGGTTGTAACTCGTTATGACTGGAGCTTAGTCCATCCAGATGAGCCAATCATAATGGATCCTCTCCCTGTCCCTTCTCATGGAATGCCAATTAAGATTTCTCCAAAATCAGAAGTTTGTCCCAATGTTCACCAAATGTAA 1551 40.23 MLSFLAAMLIISIVLVLRSNKRSKNIPPGQMGLPWIGETMAFYKAQRKNRVFEDFVRPRVAKHGKIFKTSLMGSPTVVVNGAEANRFFLSNEFKLVVSSWPSGSVQLMGEECIMQKQGERHRIVRALIAASLSSSSLEVMMPKLCNTIKVYLETKWVGCDTIGLFHSAKVLTFTIVFECLMGIKVEPRVLMTFERVLEGVFVPPLRFPGTRFSRAKKARLEIEKMLREVVREKRRGIEGKLEEEEEEECGSLLSRMVRAMIRGEINETEVIDNVVLLVFAAHDTTSFAIAMTFKMLAQHSNCYSLLLQEHTDIVRSKGPSQNLTMEDIKKMKYTWQVARESIRLFPPIFGSFRKAISDIEYERFFIPKGWKVKISINSSAVSLHQLIYPAVNCCPEMTIILPRIILVAWQVLWTTYGTHYEEEYFEDPLSFKPSRFEEPVSQYVYVPFGGGPRACAGYQLAKLNILIFIHLVVTRYDWSLVHPDEPIIMDPLPVPSHGMPIKISPKSEVCPNVHQM 516
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 37407452 37409707 + CmPI595203_09g021270.1 Cmu09g2127 425356
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmu09g2127 516 SUPERFAMILY Cytochrome P450 27 504 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu09g2127 516 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu09g2127 516 PRINTS P450 superfamily signature 455 466 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu09g2127 516 PRINTS P450 superfamily signature 336 347 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu09g2127 516 PRINTS P450 superfamily signature 280 297 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu09g2127 516 Gene3D Cytochrome P450 16 506 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu09g2127 516 PANTHER CYTOCHROME P450 26 25 483 - GO:0004497(PANTHER)|GO:0005783(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)|GO:0051777(PANTHER)
Cmu09g2127 516 Pfam Cytochrome P450 27 378 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu09g2127 516 Pfam Cytochrome P450 410 492 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu09g2127 516 CDD CYP90-like 59 505 - -
Cmu09g2127 516 Coils Coil 215 247 - -
Cmu09g2127 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 448 457 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cmu09g2127 516 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu09g2127 516 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu09g2127 516 PRINTS E-class P450 group I signature 414 438 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu09g2127 516 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu09g2127 516 PRINTS E-class P450 group I signature 269 286 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu06g1469 Cmu-Chr6:25957056 Cmu09g2127 Cmu-Chr9:37407452 1.90E-64 dispersed
Cmu09g2127 Cmu-Chr9:37407452 Cmu11g0497 Cmu-Chr11:5421664 1.00E-44 dispersed
Cmu09g2127 Cmu-Chr9:37407452 Cmu02g0628 Cmu-Chr2:6130004 6.00E-53 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu09g2127 - - - 0.0