Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu09g2134 ATGGTATTGCCACCGTCCAATCCATCCTTATCCATACGTTCTGGGCTCTACGAATGGCATTCATCGAGTAGGAATGCAAAAAGTCTCTATCCTCGATCTGATTCTGGTTACTTTATGGTAGCTGGTGGTGTCGGTTGTTCTGGTTTGGTGATTGAGTTTTTGGTTCAGGTTTTGGGATTGCAGGTGGGGAAGTGTATGAGGGATTTGATTTGGATTTCGTCTTCACTGTCTCCAACCTGGTTTGAGACTTTAAGGAAATGCAGACCGGTCATCAATTCTGCAGAATTGGACTTTTTCTCTGAATACGGCGATGCCAACAGATTCAAAGTTCGCGAAGTTATTGGAAAGGGGAGTTATGGTGTGGTTTGTTCAGCTGTTGACACTCTCACTAATGAAAAAGTGGCAATAAAGAAGATACACGATATTTTTGAACATGTATCTGATGCTGCCCGTATTCTTCGTGAGATAAAGCTGCTCAGGCTTCTACGTCATCCTGATATTGTTGAAATTAAACACATTATGTTACCACCTTCTCGTAGGGGGTTCAAAGATATTTTTGTTGTGTTTGAGTTGATGGAATCAGATTTGCATCAAGTCATCAAGGCCAACGATGATTTAACAAAAGAGCACTATCAATTTTTCCTTTATCAGCTACTCCGTGCGCTGAAATATATTCACACAGCAAATGTCTACCATCGGGATTTAAAACCAAAGAATATATTGGCAAATGCAAATTGCAAACTCAAAATCTGTGATTTTGGATTGGCTAGAGTTGCTTTTAGTGACACCCCAACTACAATATTTTGGACGGACTATGTTGCTACTAGATGGTATAGGGCTCCAGAGCTATGTGGTTCTTTCTTCTCTAAGTATACTCCTGCCATTGACATTTGGAGTATTGGCTGCATATTTGCTGAAGTACTGACCGGGAAACCACTTTTTCCTGGTAAAAATATTGTTCATCAGCTTGATTTGATGACAGATCTCCTTGGAACACCGTCATTGGATACCATTTCTCGGGTAAGAAATGAAAAGGCCAGGAGGTACTTAACTAGTATGAGGAAGAAGCAGCCCATACCCTTTTCTCAGAAGTTCCCTAATGCTGATCCTGTAGCCCTGCAATTGCTACAACGATTGCTTGCATTTGATCCAAAGGATCGACCTACTGCTGAAGAGGCTTTGGCAGATCCTTACTTTAAGGGGCTGGCAAAAGTTGAGAGGGAACCTTCTTGCCAGCCAATCTCAAAGGTGGAGTTTGAATTTGAAAGGAGAAAGGTCACAAAGGATGACATTCGCGAGCTAATATTCCTTGAGATACTAGAATACCATCCTCAACTGCTAAAAGACTACTTAAATGGAACTGAGAGATCAAATTTTCTTTATCCAAGTGCACTAGATCAGTTCAAAAAGCAATTTGCTCATCTTGAAGATAATGGAGGGAAAAGTGGACCAGTTTATCCTTTAGAAAGAAAACATGCATCTCTTCCTAGGTCTTCAGTACAGTCAAATACCATTCCTCCTAAAGCTACATCAAATATTGTTTCCTTTAAAGACCGATATGCGCCAGCAGGTTCGTTCAGCAGTCAGCATTTCAGAGATCCAGCAGCGCAGAGGATTGCTGCTGCTCAAGCCAAGCCTGGAAGAATCTCGGGCCCGGTCGTGCCATATGAAAGTGGAAGTATTGTTAAAGATGCCTACGACCCGAGAATGTTAATTAGAAGTGCCTTCCCTTCTCATGCTATCCATCCAACATATTACTATCAGCAATCTTGCGGCCAAAATGAAGAAAGATCAGCAACGGGGGCTGAACAGGACACATCCTTGCAATGTAAACAATCCCCTCAATGTGGAATGGCTGCCAAATTAGCAGGAGATACAGCTGCTACTGGTGCTTTCTCAAATCCTTTCTTTATGGCGCGTGTAGGCATGCCCAAGATCGGAAACAATGACCGTGCTGCACGTTTGCAGGTAAGTGCTCAATATGATGCTGGAGCTGTTGCTGCTGCAACTACCACCACCCATCGAAACACTGGCACGGTCGACTTTCAACTCACTGGCTTTGGTTACACAACTGAGCTGTGTTTCAGAATTCAGACTTTGAAACTCACTATCATCATATTGGCCATTGAAGAGGAAGCTGAGCTTATTGATGGATAG 2157 42.56 MVLPPSNPSLSIRSGLYEWHSSSRNAKSLYPRSDSGYFMVAGGVGCSGLVIEFLVQVLGLQVGKCMRDLIWISSSLSPTWFETLRKCRPVINSAELDFFSEYGDANRFKVREVIGKGSYGVVCSAVDTLTNEKVAIKKIHDIFEHVSDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRGFKDIFVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNIVHQLDLMTDLLGTPSLDTISRVRNEKARRYLTSMRKKQPIPFSQKFPNADPVALQLLQRLLAFDPKDRPTAEEALADPYFKGLAKVEREPSCQPISKVEFEFERRKVTKDDIRELIFLEILEYHPQLLKDYLNGTERSNFLYPSALDQFKKQFAHLEDNGGKSGPVYPLERKHASLPRSSVQSNTIPPKATSNIVSFKDRYAPAGSFSSQHFRDPAAQRIAAAQAKPGRISGPVVPYESGSIVKDAYDPRMLIRSAFPSHAIHPTYYYQQSCGQNEERSATGAEQDTSLQCKQSPQCGMAAKLAGDTAATGAFSNPFFMARVGMPKIGNNDRAARLQVSAQYDAGAVAAATTTTHRNTGTVDFQLTGFGYTTELCFRIQTLKLTIIILAIEEEAELIDG 718
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 37458842 37464456 - CmPI595203_09g021340.1 Cmu09g2134 425363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu09g2134 718 SMART serkin_6 108 399 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu09g2134 718 ProSiteProfiles Protein kinase domain profile. 108 399 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu09g2134 718 FunFam Mitogen-activated protein kinase 194 422 - -
Cmu09g2134 718 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 107 438 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Cmu09g2134 718 SUPERFAMILY Protein kinase-like (PK-like) 105 403 IPR011009 -
Cmu09g2134 718 ProSitePatterns Protein kinases ATP-binding region signature. 114 138 IPR017441 GO:0005524(InterPro)
Cmu09g2134 718 ProSitePatterns MAP kinase signature. 143 246 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu09g2134 718 Pfam Protein kinase domain 109 399 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu09g2134 718 Gene3D Transferase(Phosphotransferase) domain 1 194 422 - -
Cmu09g2134 718 FunFam Mitogen-activated protein kinase 100 201 - -
Cmu09g2134 718 Gene3D Phosphorylase Kinase; domain 1 123 445 - -
Cmu09g2134 718 CDD STKc_TDY_MAPK 107 444 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu06g1497 Cmu-Chr6:26259740 Cmu09g2134 Cmu-Chr9:37458842 3.30E-197 dispersed
Cmu07g0682 Cmu-Chr7:12136067 Cmu09g2134 Cmu-Chr9:37458842 7.20E-184 dispersed
Cmu07g1025 Cmu-Chr7:25002257 Cmu09g2134 Cmu-Chr9:37458842 6.10E-204 dispersed
Cmu08g1420 Cmu-Chr8:26339756 Cmu09g2134 Cmu-Chr9:37458842 1.10E-87 dispersed
Cmu09g2134 Cmu-Chr9:37458842 Cmu10g1948 Cmu-Chr10:25044740 6.40E-45 dispersed
Cmu02g1829 Cmu-Chr2:32199954 Cmu09g2134 Cmu-Chr9:37458842 2.10E-246 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75818 PF00069 Pkinase 1.10E-66 CL0016 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu09g2134 - - - 0.0