Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu09g2146 | ATGTCATCTGGAAGTAGTAGTACTTTGAATACAGAATTGTCAAAGAAAACACCCTTCCTTGGTTTGTCCCTATGGGTTTTGATCTGCTTATGTGTTGGTGCATTTATTGTATTAATTCTCGGTATCTTATCTGTATGGGTGATGTTTAGAAGAAAAACAAGGAGATCCCCAGAAAATTTCTCAATTTCTCAAATACCAAATGTCTCGAAGGATATTAAGGTGGACAGAATCGCGACTCAATCTGCCCACCACAATCATCTCGAGAACCTTTATCTTTCCATTCATGATAAATCAAGTGAGAAGAACTCAGAGAAGATGATTGGTCATTTGGGTATGAGCAAGTCTAGTGATCCTGATAACATAAGCCAATGCAGCTCCAATTATCATCATGAAAGAGTTTTCAGCTCACATTCAGGAGAAGAAGGAAGCTCTGGGACTGTTAGAAAGCAGTCTTCCATGTCCTATGGAGGGTATGGAGGCCTTGTGACTGCCTCTCCTCTTGTTGGCCTGCCTGAAATTTCGCATCTTGGTTGGGGTCATTGGTTTACACTCAGGGATCTAGAATTTGCGACAAATCGTTTCGCTGCAGACAATGTGCTTGGGGAAGGGGGTTATGGGGTCGTCTACAAAGGCAGACTGATAAATGGAACTGAGGTTGCAGTGAAGAAACTTCTCAATAATCTGGGACAAGCAGAGAAAGAATTTAGAGTTGAAGTGGAGGCCATCGGTCATGTAAGACACAAGAACCTTGTACGGCTCCTCGGCTATTGCATAGAAGGAGTTCATAGGATGCTGGTCTATGAATATGTGAACAATGGGAACTTAGAGCAATGGTTACATGGGGCTATGCGGCAACATGGCACCCTTACTTGGGAGGCTCGAATGAAGGTGCTTCTTGGCACTGCCAAGGCGCTAGCATATTTACATGAAGCAATTGAACCAAAGGTTGTCCACAGAGACATAAAATCGAGCAACATCTTAATCGATGATGAATTTAATGCAAAGGTTTCAGATTTTGGATTGGCCAAGCTTTTGGATGCAGGAGAGAGTCACATCACGACTAGAGTGATGGGAACATTTGGGTATGTGGCGCCAGAATATGCCAACACTGGCTTGTTAAACGAGAAGAGTGACATTTATAGCTTTGGTGTTCTCCTTCTAGAAGCAATTACGGGAAGGGACCCAGTGGACTATGGTCGTCCTGCTAATGAGGTTAATCTTGTTGAGTGGTTAAAAGTGATGGTTGGCACAAGGAGAGCTGAGGAAGTTATTGACCCAAGTCTTGAAACTAAACCCGCTACACGAGCATTGAAACGTGCCCTTCTGATTGCACTTAGGTGTGTGGATCCTGAGGCAGATAAGAGACCAAAAATGACCCAAGTTGTTAGGATGCTTGAAGCTGATGACTACCCATCACGTGAGGATCGTCGGAGCCAGAAGAGCAGCACAGCAAACTCAGAGATCGAATCCAGTCAAGGCGAGGTCGGAAGTAAACCAGGTGAATCACAAAACAGACCCGTAAATGCATGA | 1530 | 44.05 | MSSGSSSTLNTELSKKTPFLGLSLWVLICLCVGAFIVLILGILSVWVMFRRKTRRSPENFSISQIPNVSKDIKVDRIATQSAHHNHLENLYLSIHDKSSEKNSEKMIGHLGMSKSSDPDNISQCSSNYHHERVFSSHSGEEGSSGTVRKQSSMSYGGYGGLVTASPLVGLPEISHLGWGHWFTLRDLEFATNRFAADNVLGEGGYGVVYKGRLINGTEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRQHGTLTWEARMKVLLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDAGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAITGRDPVDYGRPANEVNLVEWLKVMVGTRRAEEVIDPSLETKPATRALKRALLIALRCVDPEADKRPKMTQVVRMLEADDYPSREDRRSQKSSTANSEIESSQGEVGSKPGESQNRPVNA | 509 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 37542689 | 37545744 | - | CmPI595203_09g021460.1 | Cmu09g2146 | 425375 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu09g2146 | 509 | CDD | STKc_IRAK | 200 | 466 | - | - | |
Cmu09g2146 | 509 | Coils | Coil | 214 | 234 | - | - | |
Cmu09g2146 | 509 | FunFam | Putative receptor-like serine/threonine-protein kinase | 270 | 480 | - | - | |
Cmu09g2146 | 509 | MobiDBLite | consensus disorder prediction | 463 | 509 | - | - | |
Cmu09g2146 | 509 | Pfam | Protein kinase domain | 197 | 463 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cmu09g2146 | 509 | MobiDBLite | consensus disorder prediction | 483 | 509 | - | - | |
Cmu09g2146 | 509 | MobiDBLite | consensus disorder prediction | 463 | 482 | - | - | |
Cmu09g2146 | 509 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 316 | 328 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cmu09g2146 | 509 | Gene3D | Transferase(Phosphotransferase) domain 1 | 270 | 484 | - | - | |
Cmu09g2146 | 509 | SUPERFAMILY | Protein kinase-like (PK-like) | 178 | 471 | IPR011009 | - | |
Cmu09g2146 | 509 | ProSitePatterns | Protein kinases ATP-binding region signature. | 200 | 223 | IPR017441 | GO:0005524(InterPro) | |
Cmu09g2146 | 509 | Gene3D | Phosphorylase Kinase; domain 1 | 176 | 269 | - | - | |
Cmu09g2146 | 509 | ProSiteProfiles | Protein kinase domain profile. | 194 | 452 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cmu09g2146 | 509 | FunFam | Putative receptor-like protein kinase | 176 | 269 | - | - | |
Cmu09g2146 | 509 | PANTHER | OS01G0323000 PROTEIN | 7 | 489 | IPR052232 | - | |
Cmu09g2146 | 509 | SMART | serkin_6 | 194 | 465 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu02g1465 | Cmu-Chr2:28436592 | Cmu09g2146 | Cmu-Chr9:37542689 | 5.30E-149 | dispersed | |
Cmu06g0403 | Cmu-Chr6:4618965 | Cmu09g2146 | Cmu-Chr9:37542689 | 8.70E-155 | dispersed | |
Cmu08g1542 | Cmu-Chr8:27273886 | Cmu09g2146 | Cmu-Chr9:37542689 | 1.40E-145 | dispersed | |
Cmu09g2146 | Cmu-Chr9:37542689 | Cmu11g0534 | Cmu-Chr11:5829654 | 1.80E-78 | dispersed | |
Cmu03g1353 | Cmu-Chr3:8655836 | Cmu09g2146 | Cmu-Chr9:37542689 | 3.30E-35 | transposed | |
Cmu02g1832 | Cmu-Chr2:32243744 | Cmu09g2146 | Cmu-Chr9:37542689 | 1.80E-202 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
75819 | PF00069 | Pkinase | 6.60E-48 | CL0016 | Cmu | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu09g2146 | - | - | - | 0.0 |