Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu09g2153 ATGGCCGCGTCAGAGATGATGATGAAAAAGGGTGGTAGTGGACCACCGCCTTGCGCTGCTTGCAAGCTTCTGCGCCGGCGGTGTGCTCCGGACTGCGTTTTTGCTCCCTATTTCCCTTCCGATCAGCCTCACAAATTCTCAAGTGTTCACAAGGTTTTTGGAGCCAGCAATGTCAGCAAATTGTTGCAGGAGTTGCCAGAGCATCAAAGGAGTGATGCTGTGAGTTCAATGGTATACGAGGCAAATGCAAGGATTCGAGATCCGGTATACGGATGCGTGGGAACGATATCGTGTCTACAACGGGAAGTAGATGCATTGCAACAACAACTAGCAATGACACAGGCCCAGCTAGTTCAATTGAAAATGGGCCAATTTGCATCAACATCACAAGCATCATCTAGTACGGATGACCTCCTTCCTCCTCCGCCCAATATCAATGTGGGCGCATCACCATCCTTGTGGTCTTGCTAG 471 49.89 MAASEMMMKKGGSGPPPCAACKLLRRRCAPDCVFAPYFPSDQPHKFSSVHKVFGASNVSKLLQELPEHQRSDAVSSMVYEANARIRDPVYGCVGTISCLQREVDALQQQLAMTQAQLVQLKMGQFASTSQASSSTDDLLPPPPNINVGASPSLWSC 156
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 37633605 37635844 + CmPI595203_09g021530.1 Cmu09g2153 425382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu09g2153 156 ProSiteProfiles LOB domain profile. 16 117 IPR004883 -
Cmu09g2153 156 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 17 127 - -
Cmu09g2153 156 MobiDBLite consensus disorder prediction 131 156 - -
Cmu09g2153 156 Coils Coil 96 123 - -
Cmu09g2153 156 Pfam Lateral organ boundaries (LOB) domain 17 114 IPR004883 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g1926 Cmu-Chr2:33169525 Cmu09g2153 Cmu-Chr9:37633605 8.50E-38 dispersed
Cmu07g0502 Cmu-Chr7:5808766 Cmu09g2153 Cmu-Chr9:37633605 6.00E-39 dispersed
Cmu09g2153 Cmu-Chr9:37633605 Cmu10g2152 Cmu-Chr10:27552403 7.70E-36 dispersed
Cmu02g1848 Cmu-Chr2:32398445 Cmu09g2153 Cmu-Chr9:37633605 3.10E-46 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
6910 PF03195 LOB 1.80E-43 No_clan Cmu TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu09g2153 - - - 0.0