Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu09g2153 | ATGGCCGCGTCAGAGATGATGATGAAAAAGGGTGGTAGTGGACCACCGCCTTGCGCTGCTTGCAAGCTTCTGCGCCGGCGGTGTGCTCCGGACTGCGTTTTTGCTCCCTATTTCCCTTCCGATCAGCCTCACAAATTCTCAAGTGTTCACAAGGTTTTTGGAGCCAGCAATGTCAGCAAATTGTTGCAGGAGTTGCCAGAGCATCAAAGGAGTGATGCTGTGAGTTCAATGGTATACGAGGCAAATGCAAGGATTCGAGATCCGGTATACGGATGCGTGGGAACGATATCGTGTCTACAACGGGAAGTAGATGCATTGCAACAACAACTAGCAATGACACAGGCCCAGCTAGTTCAATTGAAAATGGGCCAATTTGCATCAACATCACAAGCATCATCTAGTACGGATGACCTCCTTCCTCCTCCGCCCAATATCAATGTGGGCGCATCACCATCCTTGTGGTCTTGCTAG | 471 | 49.89 | MAASEMMMKKGGSGPPPCAACKLLRRRCAPDCVFAPYFPSDQPHKFSSVHKVFGASNVSKLLQELPEHQRSDAVSSMVYEANARIRDPVYGCVGTISCLQREVDALQQQLAMTQAQLVQLKMGQFASTSQASSSTDDLLPPPPNINVGASPSLWSC | 156 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 37633605 | 37635844 | + | CmPI595203_09g021530.1 | Cmu09g2153 | 425382 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu09g2153 | 156 | ProSiteProfiles | LOB domain profile. | 16 | 117 | IPR004883 | - | |
Cmu09g2153 | 156 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 17 | 127 | - | - | |
Cmu09g2153 | 156 | MobiDBLite | consensus disorder prediction | 131 | 156 | - | - | |
Cmu09g2153 | 156 | Coils | Coil | 96 | 123 | - | - | |
Cmu09g2153 | 156 | Pfam | Lateral organ boundaries (LOB) domain | 17 | 114 | IPR004883 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu02g1926 | Cmu-Chr2:33169525 | Cmu09g2153 | Cmu-Chr9:37633605 | 8.50E-38 | dispersed | |
Cmu07g0502 | Cmu-Chr7:5808766 | Cmu09g2153 | Cmu-Chr9:37633605 | 6.00E-39 | dispersed | |
Cmu09g2153 | Cmu-Chr9:37633605 | Cmu10g2152 | Cmu-Chr10:27552403 | 7.70E-36 | dispersed | |
Cmu02g1848 | Cmu-Chr2:32398445 | Cmu09g2153 | Cmu-Chr9:37633605 | 3.10E-46 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
6910 | PF03195 | LOB | 1.80E-43 | No_clan | Cmu | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu09g2153 | - | - | - | 0.0 |