Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu09g2157 ATGGCGTCTTCGTCTTTAGGTTTCATCTTTGTTCTTTGTGCTGTTGCTTCCATCGTCGCCCACGTGATTGTTTTGTCTCAAGCTCAGAATTCAACTCTACCCCCCACCGATCCTGATCAAGCAAGAGCTCTGAATTCCATATTTCGACAATGGCGTATATCGGCTCCATCAGGGGCGTGGAATATAAGCGGGAATCTGTGCAGTGGGAGAGCTGTCGACACTACAACCCCCATCGATAGTAATGGAAACCTCAATCCTCTTATAAAATGTGATTGCTCAGCCAACAATGGTGCTACTTGCCTCATTACTCAACTGCACGTTTATGCGATAAATGTTGTTGGTGTACTCCCACCAGAGCTATGGACATTAACTTCCCTCACCTATCTGAAGCTGGATCAAAATTTCTTGACAGGAACATTATCTGCATCTGTTGGCAATCTCACAGAATTGCGAACCTTGAGCCTGGGCATTAATGCATTATCAGGGGAACTGCCGAAGGAACTTGGATCTCTTTCTAAACTAGAAGTATTGGCATTCGGGTCCAACAATTTCTCTGGTCCCTTACCGTCAGAGCTTGGAAGTCTTTCTATGTTAAGGGAGCTATACATTGATAGCTCTGGAGTTTCTGGTGGTATTCCTCCATCATTTTCAAGTCTGAGAAACTTGCAGACAGTATGGGCATCAGACAATGAATTCACTGGCAGAATACCTGATTTCATCGGGAGTTGGACAAGGCTCACATCTCTGAGGTTTCAAGGAAACTCTTTTACAGGTCCTATACCATCGACGTTTTCAAACTTGACATCTCTGACTGAGTTGAGAATAGGTGATTTATCCAATGGGAGCTCTTCTCTGGCATTCGTCAGTAATATGACATCTCTAACTATCCTGGTGTTGAGAAATAATAATATGACTGGTTCAATTCCATCCGACATTGGAGGATTTCGTAGACTTACCCAGCTGGACTTGAGCTTCAACAACTTGACAGGAGAGATTCCAAGCTCGCTTTTCAGTTTGAGTTCACTGTCACACTTGATTCTTGGAAATAATAAGTTAAATGGGACCCTACCTACACAGAAGAGTGCATCACTTCTAAATATAGACTTGTCATATAACGATTTATCAGGGAGCTTTCCTGCTTGGATCAACGAGCAAAACTTACAACTAAATTTAGTCGCCAACAATTTCACAATTGACAGTGCTAGTATCAGTGGTTTGCCTTCTGGATTGAATTGTCTTCAACGCAACTTTCCTTGTAATCGAGGTCGTCCAATATATTCTGATTTTGGGATCAAGTGTGGAGGTCCACAGATCAGAAGTTCATCAGGGATTTTGTTTGAAAGAGAAAATGAGACTCTCGGTCCTGCTACGTACTTTGTTACTGAGTCACAAAGGTGGGCCGTTAGTAATACTGGATACTTTACTGGGACCAACGATCCTCAATACACAGCCAATACGTTGTCTCAATTCCCAAACACCCTTGACACAGAACTTTTCCAGACACAGCGACTATCTGCTTCATCATTGAGATACTATGGACTAGGGCTTGAGAATGGCAACTACACTGTGAACCTTCATTTTGCAGAGCTAGCTTTCCCAGATTCAAATACATGGCAAAGCCGTGGGAGGCGTCTCTTTGATATATATATACAGGGAAATCGTGTGTTACAGAATTTTGATATTAGAAAGGAGGCAGGTGGGTCTTTCCTTGCTGTCAGAAAGAATTTTACGGCTGAAGTTACAGAAAACTTCCTGGAAATTCATCTCTTTTGGGCGGGGAAAGGTACTTGCTGCATACCTAAACAGGGTGATTTTGGACCCGCTGTTTCAGCCATCAGTGCTACCCCAGATTTTGTACCAACTGTCAGTAACGTTCCTCCAAGTACTAAGGAGAATAGAACAGGCCTAATCGTAGGGCTCGTTGTTGGTTTAGGATCTGTTTTCTTTCTGATTATTGGCACAGTTTTCCTTGTTGTTCAGAGAAGGAAAACGCGTCGCGCCTATGAAGATGAAGAGCTCCTAGGAATAGACACTAGACCGTACACTTTTAGTTTTTCTGAATTAAGGAGTGCTACAAATGACTTTAATTCATCCAACAAACTTGGCGAGGGAGGATTTGGACCTGTTTACAAGGGAACATTAAATGATGGAAGAGTGGTTGCTGTGAAGCAACTTTCAGTGGCATCCCACCAAGGAAAGAGCCAGTTTGTTGCTGAGATTGCTACAATATCTGCAGTGCAACATCGTAACCTTGTGAAATTATATGGATGTTGCATTGAGGCCGATAAACGTCTCCTTGTTTATGAGTTTCTTGAAAACAAGAGTCTTGACCAAGCATTATTTGGACAAAAACATTTGATTATTGATTGGCCAACACGTTTTGAGATATGCGTGGGTGTAGCAAGGGGCCTCACTTACCTTCATGAGGAATCGAGGCTTCGCATAGTGCACAGAGATGTTAAGGCCAGTAACATCCTGCTTGATGGTAATCTGATTCCCAAAATTTCAGATTTTGGCTTAGCCAAACTTTATGATGACAAAAAGACTCATATAAGCACCCGTGTTGCTGGGACAATTGGTTATCTTGCACCTGAGTATGCCATGCGTGGCCACCTTACGGAGAAGGCTGATGTCTTTGGATTTGGCGTTGTGGCTCTTGAAATTGTTAGTGGAAGGCCAAATTCAGACCCAAGCTTAGAGCAAGACAAAGTATATCTTCTCGAATGGGCATGGTACCTCCACGAAAACAACTGTGAACTTGAGATGGTGGATTCTGAATTATCAGAGTTCAGTAAGGAGGAAGTAAAAAGGGTGATCGGTGTAGCTCTTCTGTGTACTCAAACATCTCCAGCTCTTCGGCCATCGATGTCCCGTGTGGTGGCAATGCTGACTGGAGACATTGAAGTGGCCGCTGTAACTTCCAAACCAGGATACCTGACAGATTGGAAATTTGATGACATTACAAGCTTTATAGATACTCCATCAACTGAAGAACCTGATACTGGCCGTTATGCATCGACAAGTTCAAGTATCGTTGATACACATCGCTCACCAGCCAATGCTTCTGAACCAATGCTTCGTGGATTATTAGGAGAGGGTAGGTGA 3105 43.12 MASSSLGFIFVLCAVASIVAHVIVLSQAQNSTLPPTDPDQARALNSIFRQWRISAPSGAWNISGNLCSGRAVDTTTPIDSNGNLNPLIKCDCSANNGATCLITQLHVYAINVVGVLPPELWTLTSLTYLKLDQNFLTGTLSASVGNLTELRTLSLGINALSGELPKELGSLSKLEVLAFGSNNFSGPLPSELGSLSMLRELYIDSSGVSGGIPPSFSSLRNLQTVWASDNEFTGRIPDFIGSWTRLTSLRFQGNSFTGPIPSTFSNLTSLTELRIGDLSNGSSSLAFVSNMTSLTILVLRNNNMTGSIPSDIGGFRRLTQLDLSFNNLTGEIPSSLFSLSSLSHLILGNNKLNGTLPTQKSASLLNIDLSYNDLSGSFPAWINEQNLQLNLVANNFTIDSASISGLPSGLNCLQRNFPCNRGRPIYSDFGIKCGGPQIRSSSGILFERENETLGPATYFVTESQRWAVSNTGYFTGTNDPQYTANTLSQFPNTLDTELFQTQRLSASSLRYYGLGLENGNYTVNLHFAELAFPDSNTWQSRGRRLFDIYIQGNRVLQNFDIRKEAGGSFLAVRKNFTAEVTENFLEIHLFWAGKGTCCIPKQGDFGPAVSAISATPDFVPTVSNVPPSTKENRTGLIVGLVVGLGSVFFLIIGTVFLVVQRRKTRRAYEDEELLGIDTRPYTFSFSELRSATNDFNSSNKLGEGGFGPVYKGTLNDGRVVAVKQLSVASHQGKSQFVAEIATISAVQHRNLVKLYGCCIEADKRLLVYEFLENKSLDQALFGQKHLIIDWPTRFEICVGVARGLTYLHEESRLRIVHRDVKASNILLDGNLIPKISDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKADVFGFGVVALEIVSGRPNSDPSLEQDKVYLLEWAWYLHENNCELEMVDSELSEFSKEEVKRVIGVALLCTQTSPALRPSMSRVVAMLTGDIEVAAVTSKPGYLTDWKFDDITSFIDTPSTEEPDTGRYASTSSSIVDTHRSPANASEPMLRGLLGEGR 1034
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 37667281 37676655 - CmPI595203_09g021570.1 Cmu09g2157 425386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu09g2157 1034 MobiDBLite consensus disorder prediction 993 1017 - -
Cmu09g2157 1034 SUPERFAMILY L domain-like 102 407 - -
Cmu09g2157 1034 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 20 989 IPR051824 GO:0005886(PANTHER)
Cmu09g2157 1034 FunFam Putative LRR receptor-like serine/threonine-protein kinase 281 404 - -
Cmu09g2157 1034 Pfam Leucine Rich Repeat 245 267 IPR001611 GO:0005515(InterPro)
Cmu09g2157 1034 Pfam Leucine Rich Repeat 293 314 IPR001611 GO:0005515(InterPro)
Cmu09g2157 1034 Pfam Leucine Rich Repeat 317 339 IPR001611 GO:0005515(InterPro)
Cmu09g2157 1034 FunFam Os05g0263100 protein 41 280 - -
Cmu09g2157 1034 MobiDBLite consensus disorder prediction 993 1034 - -
Cmu09g2157 1034 CDD STKc_IRAK 701 965 - -
Cmu09g2157 1034 Gene3D - 429 616 - -
Cmu09g2157 1034 FunFam Leucine-rich repeat receptor-like protein kinase 665 770 - -
Cmu09g2157 1034 Gene3D Ribonuclease Inhibitor 283 418 IPR032675 -
Cmu09g2157 1034 Gene3D Ribonuclease Inhibitor 59 282 IPR032675 -
Cmu09g2157 1034 Pfam Malectin domain 430 612 IPR021720 -
Cmu09g2157 1034 SUPERFAMILY Protein kinase-like (PK-like) 678 997 IPR011009 -
Cmu09g2157 1034 Gene3D Phosphorylase Kinase; domain 1 657 770 - -
Cmu09g2157 1034 Pfam Protein tyrosine and serine/threonine kinase 698 962 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu09g2157 1034 ProSitePatterns Serine/Threonine protein kinases active-site signature. 815 827 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu09g2157 1034 FunFam Leucine-rich repeat receptor-like protein kinase 426 616 - -
Cmu09g2157 1034 ProSiteProfiles Protein kinase domain profile. 695 969 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu09g2157 1034 SMART serkin_6 695 963 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu09g2157 1034 Gene3D Transferase(Phosphotransferase) domain 1 771 974 - -
Cmu09g2157 1034 FunFam Putative LRR receptor-like serine/threonine-protein kinase 771 975 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu06g1451 Cmu-Chr6:25773715 Cmu09g2157 Cmu-Chr9:37667281 9.10E-89 dispersed
Cmu07g1022 Cmu-Chr7:24961755 Cmu09g2157 Cmu-Chr9:37667281 2.00E-90 dispersed
Cmu09g2157 Cmu-Chr9:37667281 Cmu11g1729 Cmu-Chr11:29438639 6.90E-149 dispersed
Cmu09g2157 Cmu-Chr9:37667281 Cmu11g1728 Cmu-Chr11:29414431 1.10E-143 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75820 PF07714 PK_Tyr_Ser-Thr 6.90E-46 CL0016 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu09g2157 - - - 0.0