Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu10g0857 ATGTCGTCGAACCATTCGGATTTTGAATCTTCAGCTTTTGATACTCAAACTTCGTCCAATCCGATTGCTCCCTTGGATCATCTTCCCTCCACCTCCTCCACCCTCTCTGAATCTGAAGAAAATCCCTGCACATCATCTTCGCCTTCCTCCACTCCACCTCCGATTCACCTACCTCTCTCTTGGCCTACCGATGCCACCCTTTCCCTCCAATGGATACACCATCTCATCGCCGCCTTCGACTGGTCTTCCAAAAATTTACCTCCATCCCAGTTTCCTTCCGTCCTTCCCGTCTCCGTTTTCGACACTCTAATCCTCACCGCTTCTAAAATCCTCCACAAAGAACCCAATTGCCTCAGAATCCTCCAAGACTCAGCCGCCAGCAGCGACTCGACTGTAGTCGTCGTCGGAGACATCCACGGCCAATTTCATGATCTCCTCTTTCTTCTGCAGGATGCTGGTTTTCCTTCTGAAAACCGCTTCTTTGTCTTCAATGGGGATTACGTCGACAGAGGGGCTTGGGGTCTTGAAACTTTTTTGCTCTTATTGGCTTGGAAGGTGTTTATGCCACATCGAGTATTTCTTCTTCGTGGAAACCACGAGTCCAAGTACTGCACATCCGTTTATGGTTTTGAGAAGGAGGTGCTAACCAAGTACGGAGACAAGGGTAAGCATGTCTATCGGAAGTGCTTGGGGTGTTTCGAAGGGCTGCCTTTGGCCTCCATTATTGCTGGATGTGTATATACGGCTCATGGAGGACTTTTCCGCAGCATATCAGTTCCTTCGTCTAAAAGGTCGAAAGGGAAAAAAAATCGTAGGATAATCTTAAATCCCGAAGCCAACGGGTTATCTCTTGGTTCTTTGGAGGAACTATCCAAAGCCAGAAGATCGGTTCTTGATCCCCCATGGGAAGGCTTGAATTTAATTCCGGGCGATGTGTTGTGGTCTGATCCCTCGATGAATCCTGGTCTCTCCCCAAATAAAGAGAGAGGCATAGGTCTCTTGTGGGGTCCTGATTGCACTGAAGAATTCTTGAAAAAATTCAATCTGAAGCTAATTATTAGATCCCATGAAGGTCCTGATGCTAGAGAAAAGAGACCCGGTCTTGCAGGAATGGATCAGGGTTACACGATAGATCATGTTGTAGATTCAGGGAAACTGATTACTTTGTTTAGTGCTCCAGACTATCCACAATTTCAGGCAACTGAGGAGAGATACAAAAACAAAGGTGCATATATTGTTCTAGAACCTCCGAATTTTGATGTTCCAATCATTCATAGTTTTGATGCCATTACTCCACGACCAAAGGTCAATGCATATTACGATTTTGAGGATGTAATTGATTCTGACGAAGAATTAGACTTGGCTTCAATGGCAACTGATCCATGA 1386 45.74 MSSNHSDFESSAFDTQTSSNPIAPLDHLPSTSSTLSESEENPCTSSSPSSTPPPIHLPLSWPTDATLSLQWIHHLIAAFDWSSKNLPPSQFPSVLPVSVFDTLILTASKILHKEPNCLRILQDSAASSDSTVVVVGDIHGQFHDLLFLLQDAGFPSENRFFVFNGDYVDRGAWGLETFLLLLAWKVFMPHRVFLLRGNHESKYCTSVYGFEKEVLTKYGDKGKHVYRKCLGCFEGLPLASIIAGCVYTAHGGLFRSISVPSSKRSKGKKNRRIILNPEANGLSLGSLEELSKARRSVLDPPWEGLNLIPGDVLWSDPSMNPGLSPNKERGIGLLWGPDCTEEFLKKFNLKLIIRSHEGPDAREKRPGLAGMDQGYTIDHVVDSGKLITLFSAPDYPQFQATEERYKNKGAYIVLEPPNFDVPIIHSFDAITPRPKVNAYYDFEDVIDSDEELDLASMATDP 461
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 646972 658507 - CmPI595203_10g008570.1 Cmu10g0857 426387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu10g0857 461 CDD MPP_PP7 61 441 IPR041754 -
Cmu10g0857 461 ProSitePatterns Serine/threonine specific protein phosphatases signature. 195 200 IPR006186 GO:0016787(InterPro)
Cmu10g0857 461 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 34 453 IPR051134 -
Cmu10g0857 461 FunFam Serine/threonine-protein phosphatase 79 455 - -
Cmu10g0857 461 SUPERFAMILY Metallo-dependent phosphatases 92 433 IPR029052 -
Cmu10g0857 461 MobiDBLite consensus disorder prediction 1 57 - -
Cmu10g0857 461 MobiDBLite consensus disorder prediction 1 46 - -
Cmu10g0857 461 Pfam Calcineurin-like phosphoesterase 131 357 IPR004843 GO:0016787(InterPro)
Cmu10g0857 461 Gene3D - 89 449 IPR029052 -
Cmu10g0857 461 SMART pp2a_7 95 431 IPR006186 GO:0016787(InterPro)
Cmu10g0857 461 PRINTS Serine/threonine phosphatase family signature 194 218 IPR006186 GO:0016787(InterPro)
Cmu10g0857 461 PRINTS Serine/threonine phosphatase family signature 131 158 IPR006186 GO:0016787(InterPro)
Cmu10g0857 461 PRINTS Serine/threonine phosphatase family signature 231 257 IPR006186 GO:0016787(InterPro)
Cmu10g0857 461 PRINTS Serine/threonine phosphatase family signature 385 401 IPR006186 GO:0016787(InterPro)
Cmu10g0857 461 PRINTS Serine/threonine phosphatase family signature 161 188 IPR006186 GO:0016787(InterPro)
Cmu10g0857 461 PRINTS Serine/threonine phosphatase family signature 291 318 IPR006186 GO:0016787(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu09g1913 Cmu-Chr9:35181543 Cmu10g0857 Cmu-Chr10:646972 2.00E-113 dispersed
Cmu10g0857 Cmu-Chr10:646972 Cmu11g1290 Cmu-Chr11:25117642 2.90E-30 dispersed
Cmu10g0857 Cmu-Chr10:646972 Cmu09g2122 Cmu-Chr9:37353093 1.80E-48 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu10g0857 K04460 - csv:116402510 820.076