Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu10g0895 ATGCTATCAAGCTTGATGAACTTCCTGAGGGCTTGCTGGCAGCCATGTGCCGATCATCTCTTGCGTCGTCGGGGCGGTGGTTCCGATTCGGTTGGCTGCCAAGATGGGCTACTTTGGTACAAGGACCATGGCCATCACATCAATGGAGAATTTTCAATGGCTGTTGTTCAAGCCAACAATTTACTTGAGGATCAGAGTCAGCTTGAGTCTGGTCCCTTGAGCTTGCTCGAGTCTGGACCCTATGGAACCTTTATAGGAATATACGATGGCCATGGCGGCCCTGAGACATCACGATTCATATGTGATAACTTGTTCCAGCATCTCAAAGTGTTCGCCACAGAAGAAAAGGAAATGTCAGTTAATGTGATAAAAAAAGCATTCCAAGCAACAGAAGAGGGGTTTCTCTCTATTGTCACCAAGCAATGGCCTATGAACCCCCAGATTGCGGCTGTTGGTTCTTGCTGTCTGGTTGCTGTGATTTGTAATGGAAAACTCTACATTGCCAATCTTGGTGATTCCCGAGCTGTGTTGGGAAGGTTAGTTCGGTCCACGGGGGAAGTTCTTCCCATTCAGCTGTCATCGGAGCATAATGTAAGCATACAGTCAGTCCGCCAGGAGATGCAGTCTTTGCACCCAGATGACTCCCACATAGTAGTGCTGAAGCATAATGTATGGCGCGTAAAGGGCTTGATTCAGATTTCTCGGTCAATCGGAGACGTATATCTCAAAAAGCCAGAATTTAACCGGGAGCCTTTGTATGCTAAGTTTCGCCTCCGAGAACCCTTCAGTAGGCCTATTTTGAGCTCAGAACCAGCAGTCTCTGTGCACGAACTAGATACAAATGATCAATTTCTCATATTTGCCTCTGATGGGCTGTGGGAGCACCTTAGCAACCAGGATGCGGTTGATATAGTTCACAAGCATCCTCACAGTGGAAGTGCAAGGAGGCTGGTGAAAGCTGCAATGCAGGAAGCAGCTAAGAAACGAGAAATGCGATACTCGGATTTGAAGAAGATTGACCGTGGAGTTCGGCGCCATTTTCACGACGACACAACGGTGATAGTCGTGTTTCTTGGATCGAGCAGAGGGAGCAGCCCTGGTACAGCATGGGAAGGGAGCCCTGTTTTGTCTGTGAGAGGGGGAGGAATGAACCTATCTGCAAAATCTCTAGCACCTTGA 1179 48.18 MLSSLMNFLRACWQPCADHLLRRRGGGSDSVGCQDGLLWYKDHGHHINGEFSMAVVQANNLLEDQSQLESGPLSLLESGPYGTFIGIYDGHGGPETSRFICDNLFQHLKVFATEEKEMSVNVIKKAFQATEEGFLSIVTKQWPMNPQIAAVGSCCLVAVICNGKLYIANLGDSRAVLGRLVRSTGEVLPIQLSSEHNVSIQSVRQEMQSLHPDDSHIVVLKHNVWRVKGLIQISRSIGDVYLKKPEFNREPLYAKFRLREPFSRPILSSEPAVSVHELDTNDQFLIFASDGLWEHLSNQDAVDIVHKHPHSGSARRLVKAAMQEAAKKREMRYSDLKKIDRGVRRHFHDDTTVIVVFLGSSRGSSPGTAWEGSPVLSVRGGGMNLSAKSLAP 392
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 994325 996945 - CmPI595203_10g008950.1 Cmu10g0895 426425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu10g0895 392 PANTHER PROTEIN PHOSPHATASE 43 357 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cmu10g0895 392 ProSiteProfiles PPM-type phosphatase domain profile. 50 358 IPR001932 -
Cmu10g0895 392 SUPERFAMILY PP2C-like 62 359 IPR036457 -
Cmu10g0895 392 Pfam Protein phosphatase 2C 83 327 IPR001932 -
Cmu10g0895 392 ProSitePatterns PPM-type phosphatase domain signature. 84 92 IPR000222 GO:0043169(InterPro)
Cmu10g0895 392 Gene3D - 40 363 IPR036457 -
Cmu10g0895 392 CDD PP2Cc 82 358 IPR001932 -
Cmu10g0895 392 SMART PP2C_4 42 356 IPR001932 -
Cmu10g0895 392 FunFam Phosphatase 2C family protein 39 366 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g0415 Cmu-Chr2:3768399 Cmu10g0895 Cmu-Chr10:994325 1.50E-160 dispersed
Cmu02g1208 Cmu-Chr2:24863102 Cmu10g0895 Cmu-Chr10:994325 4.30E-153 dispersed
Cmu02g1365 Cmu-Chr2:27213338 Cmu10g0895 Cmu-Chr10:994325 2.70E-138 dispersed
Cmu06g0431 Cmu-Chr6:4920685 Cmu10g0895 Cmu-Chr10:994325 2.10E-116 dispersed
Cmu10g0895 Cmu-Chr10:994325 Cmu10g2790 Cmu-Chr10:34491879 2.30E-137 dispersed
Cmu01g2001 Cmu-Chr1:33235040 Cmu10g0895 Cmu-Chr10:994325 1.00E-169 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu10g0895 K01102 - csv:101220137 735.717