Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu10g0912 ATGGGAGAAGAGGGACGATCCTTGGCCGTTACCCCCACTTGGGCTTTCGCCACAGTGGTTACTCTCATGGTTTCTCTTGGATTCTTCTTCCAAGGCACGTTGAAACGGACCAAAAAGTGGTTGAATAGGACGAAGAGAAAATCGTTACTCGCCGCGTTGGATAAGATTAAAGAAGAGCTGATGCTCTTTGGACTTCTTTCGTTGTTGATGGGTCACTGGATTGTTTTTGTTGCAAGAATTTGTGTTAAGTCATCTGTCTTGAGCAGCCGTTTCTATCCTTGTGCGTTGGAGATTGATCTGAAACGAGTTAGACATATTTCTATTGCAAGTGAAAACTTGAACAGTTCTGTTCCAAGGGAGCATAATAACGATGGGATACGAGAGTATTGTCCTGAGGGTCGTGAATCATTTGCTTCATATGAAAGTTTAGAGCAGCTTCATCGATTAATTTTCGTTCTTGGTGTCACCCATGTTTCATATAGCTTCATTGCTATTGCCCTGGCTATGATTAAGATATATGGGTGGAGAGCGTGGGAAAATGAGGCTAAGGCTTTGGCCATTCAGAATGCTCAAGAATCTGTACAAGCATCATCAACTGGACCAAACATAAGGCGACTATCAACTTTTGTCTTTCACCATACTTCTCATCCATGGAGTCAGCATAGAGTCCTTGTTTGGCTGCTCTGTTTCAGCCGCCAGTTTTGGAGTTCTATCAATCGAGCTGATTACATGGCTTTGCGGTTGGGATTTATCAGTACTCATGAACTTCCTATATCATATGACTTCCATAATTATATGCTTCGAAGCATGGACGATGAATTTCGCGATATGGTTGGTATAAGCGTGCCACTCTGGATATATGCCATTGCTTGCATCTTCCTCAACTTTCATGGAAGCAACATTTACTTTTGGCTTTCCTTTCTCCCTGCAATTTTGATTCTGCTAATCGGGACAAAACTGCACCGGGTAGTTGTAAAGTTGGCTGTAGAAGTTGTGGATACATCTCGAAGGGGATATTACCGTTTTAACTTGAGGGATGAACTGTTTTGGTTTGGGAAGCCTAAGCTTCTTTTATGGTCGATACAATTTATATCCTTCCAGAATGCTTTTGAGATGGCTACATTTATTTGGTCCCTGTGGGAAATTAAGGAACCTTCTTGTTTCATGGACAACGTAACATACGTAGGTATCCGCTTGGCCTTTGGGGTTATCACTCAGTTTTGGTGTAGCTTCATTACATTCCCACTCTATGTTATAGTAACTCAGATGGGGTCGAAGGTCAAGAAATCACTAGTGTCGGAGAATGTCCGAAACTCGCTTCATCAATGGAAAAGAAGAGTGAAGGCAAGGCCGGGTGTTTCTTCCTCAGTTGCACTTGTGGGTGCAACATCACTTTCATCCTCCGTTTGTACAATGGATGATGATGGTCAGATAATCGACGACTTTACTGTGGACTGCTTGGAAGGAAGCACATCGAACACCGCCCAATACACACATTTCTCCCAGGTACTTCAGCAAGCTTCGTCGGACGACACGGACGTACAAATATCTGTTAGTTCTAGTCCTCACATTACTTCCAACAACAAGGGTGAAGGCAATGAGGATCATAGAGGGAAATGA 1620 43.09 MGEEGRSLAVTPTWAFATVVTLMVSLGFFFQGTLKRTKKWLNRTKRKSLLAALDKIKEELMLFGLLSLLMGHWIVFVARICVKSSVLSSRFYPCALEIDLKRVRHISIASENLNSSVPREHNNDGIREYCPEGRESFASYESLEQLHRLIFVLGVTHVSYSFIAIALAMIKIYGWRAWENEAKALAIQNAQESVQASSTGPNIRRLSTFVFHHTSHPWSQHRVLVWLLCFSRQFWSSINRADYMALRLGFISTHELPISYDFHNYMLRSMDDEFRDMVGISVPLWIYAIACIFLNFHGSNIYFWLSFLPAILILLIGTKLHRVVVKLAVEVVDTSRRGYYRFNLRDELFWFGKPKLLLWSIQFISFQNAFEMATFIWSLWEIKEPSCFMDNVTYVGIRLAFGVITQFWCSFITFPLYVIVTQMGSKVKKSLVSENVRNSLHQWKRRVKARPGVSSSVALVGATSLSSSVCTMDDDGQIIDDFTVDCLEGSTSNTAQYTHFSQVLQQASSDDTDVQISVSSSPHITSNNKGEGNEDHRGK 539
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1137035 1141542 - CmPI595203_10g009120.1 Cmu10g0912 426442

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cmu10g0912 539 Pfam Mlo family 5 457 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Cmu10g0912 539 MobiDBLite consensus disorder prediction 511 539 - -
Cmu10g0912 539 MobiDBLite consensus disorder prediction 511 528 - -
Cmu10g0912 539 PANTHER MLO-LIKE PROTEIN 1 2 502 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu10g0912 K08472 - - csv:101217051 976.467
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu09g1800 Cmu-Chr9:34184670 Cmu10g0912 Cmu-Chr10:1137035 8.90E-103 dispersed
Cmu10g0912 Cmu-Chr10:1137035 Cmu11g1807 Cmu-Chr11:30193701 1.90E-105 dispersed
Cmu10g0912 Cmu-Chr10:1137035 Cmu05g1058 Cmu-Chr5:9906301 6.10E-141 transposed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cmu09g1800 . 3 553 MLO family AT5G53760 69.2 6.6e-218 753.8
Cmu11g1807 . 5 551 MLO family AT5G53760 69.2 3.6e-216 748.0
Cmu05g1058 . 9 468 MLO family AT5G53760 51.3 4.1e-127 452.2
Cmu03g0849 . 10 466 MLO family AT3G45290 53.8 1.2e-135 480.3
Cmu09g1800 . 3 553 MLO family AT1G26700 68.2 1.1e-212 736.5
Cmu11g1807 . 1 532 MLO family AT1G26700 68.3 1.9e-209 725.7
Cmu03g0848 . 8 536 MLO family AT2G39200 63.8 1.3e-192 669.8
Cmu05g2147 . 7 499 MLO family AT2G39200 67.7 8.2e-192 667.2
Cmu02g2096 . 8 505 MLO family AT2G39200 67.1 1.2e-190 663.3
Cmu02g2096 . 1 416 MLO family AT1G61560 65.9 5.9e-160 560.8
Cmu03g0848 . 1 416 MLO family AT1G61560 66.3 2.8e-157 552.0
Cmu05g2147 . 7 408 MLO family AT1G61560 65.2 9.2e-153 537.0
Cmu01g2043 . 28 422 MLO family AT1G61560 52.2 2.0e-115 412.9
Cmu01g2043 . 18 490 MLO family AT2G17430 63.4 3.0e-172 602.1
Cmu10g0861 . 29 490 MLO family AT2G17430 63.4 1.6e-160 563.1
Cmu08g0877 . 4 453 MLO family AT2G17430 54.4 8.9e-132 467.6
Cmu01g2043 . 7 567 MLO family AT2G17480 63.4 1.1e-196 683.3
Cmu10g0861 . 5 574 MLO family AT2G17480 59.0 2.6e-177 619.0
Cmu08g0877 . 11 454 MLO family AT2G17480 56.6 2.0e-140 496.5
Cmu03g0848 . 8 463 MLO family AT2G17480 52.6 2.3e-125 446.4
Cmu02g2096 . 8 463 MLO family AT2G17480 50.3 2.6e-124 443.0
Cmu08g0877 . 1 366 MLO family AT1G42560 58.9 1.3e-124 443.4
Cmu01g2043 . 28 386 MLO family AT1G42560 58.7 1.5e-120 429.9
Cmu10g0861 . 29 388 MLO family AT1G42560 56.5 2.1e-111 399.4
Cmu06g0054 . 6 419 MLO family AT4G24250 54.2 6.0e-117 417.9
Cmu01g2043 . 8 387 MLO family AT5G65970 66.8 8.1e-145 510.8
Cmu10g0861 . 28 388 MLO family AT5G65970 66.2 4.1e-136 481.9
Cmu08g0877 . 7 364 MLO family AT5G65970 57.2 3.0e-115 412.5
Cmu02g2096 . 2 381 MLO family AT5G65970 51.8 5.7e-106 381.7
Cmu03g0848 . 2 381 MLO family AT5G65970 50.9 2.2e-102 369.8
Cmu08g0877 . 2 441 MLO family AT2G33670 62.3 1.4e-158 556.6
Cmu01g2043 . 20 470 MLO family AT2G33670 61.6 5.1e-158 554.7
Cmu10g0861 . 29 471 MLO family AT2G33670 58.7 9.7e-141 497.3
Cmu05g2147 . 64 525 MLO family AT1G11310 64.3 2.3e-169 592.4
Cmu03g0848 . 63 506 MLO family AT1G11310 64.9 4.4e-165 578.2
Cmu02g2096 . 63 520 MLO family AT1G11310 62.7 7.1e-163 570.9
Cmu06g0054 . 5 501 MLO family AT2G44110 59.5 1.9e-165 579.3
Cmu06g0054 . 1 508 MLO family AT4G02600 72.9 9.0e-214 740.0
Cmu05g1058 . 5 562 MLO family AT1G11000 67.0 6.4e-213 737.3
Cmu10g0912 . 1 494 MLO family AT1G11000 51.9 1.0e-130 464.2
Cmu06g0054 . 1 508 MLO family AT4G02600 72.9 9.0e-214 740.0
Cmu05g2147 . 64 525 MLO family AT1G11310 64.3 2.3e-169 592.4
Cmu03g0848 . 63 506 MLO family AT1G11310 64.9 4.4e-165 578.2
Cmu02g2096 . 63 520 MLO family AT1G11310 62.7 7.1e-163 570.9
Cmu03g0849 . 10 466 MLO family AT3G45290 53.8 1.2e-135 480.3
Cmu05g1058 . 5 562 MLO family AT1G11000 67.0 6.4e-213 737.3
Cmu10g0912 . 1 494 MLO family AT1G11000 51.9 1.0e-130 464.2
Cmu08g0877 . 2 441 MLO family AT2G33670 62.3 1.4e-158 556.6
Cmu01g2043 . 20 470 MLO family AT2G33670 61.6 5.1e-158 554.7
Cmu10g0861 . 29 471 MLO family AT2G33670 58.7 9.7e-141 497.3
Cmu02g2096 . 1 416 MLO family AT1G61560 65.9 5.9e-160 560.8
Cmu03g0848 . 1 416 MLO family AT1G61560 66.3 2.8e-157 552.0
Cmu05g2147 . 7 408 MLO family AT1G61560 65.2 9.2e-153 537.0
Cmu01g2043 . 28 422 MLO family AT1G61560 52.2 2.0e-115 412.9
Cmu01g2043 . 18 490 MLO family AT2G17430 63.4 3.0e-172 602.1
Cmu10g0861 . 29 490 MLO family AT2G17430 63.4 1.6e-160 563.1
Cmu08g0877 . 4 453 MLO family AT2G17430 54.4 8.9e-132 467.6
Cmu01g2043 . 7 567 MLO family AT2G17480 63.4 1.1e-196 683.3
Cmu10g0861 . 5 574 MLO family AT2G17480 59.0 2.6e-177 619.0
Cmu08g0877 . 11 454 MLO family AT2G17480 56.6 2.0e-140 496.5
Cmu03g0848 . 8 463 MLO family AT2G17480 52.6 2.3e-125 446.4
Cmu02g2096 . 8 463 MLO family AT2G17480 50.3 2.6e-124 443.0
Cmu08g0877 . 1 366 MLO family AT1G42560 58.9 1.3e-124 443.4
Cmu01g2043 . 28 386 MLO family AT1G42560 58.7 1.5e-120 429.9
Cmu10g0861 . 29 388 MLO family AT1G42560 56.5 2.1e-111 399.4
Cmu01g2043 . 8 387 MLO family AT5G65970 66.8 8.1e-145 510.8
Cmu10g0861 . 28 388 MLO family AT5G65970 66.2 4.1e-136 481.9
Cmu08g0877 . 7 364 MLO family AT5G65970 57.2 3.0e-115 412.5
Cmu02g2096 . 2 381 MLO family AT5G65970 51.8 5.7e-106 381.7
Cmu03g0848 . 2 381 MLO family AT5G65970 50.9 2.2e-102 369.8
Cmu09g1800 . 3 553 MLO family AT5G53760 69.2 6.6e-218 753.8
Cmu11g1807 . 5 551 MLO family AT5G53760 69.2 3.6e-216 748.0
Cmu05g1058 . 9 468 MLO family AT5G53760 51.3 4.1e-127 452.2
Cmu03g0848 . 8 536 MLO family AT2G39200 63.8 1.3e-192 669.8
Cmu05g2147 . 7 499 MLO family AT2G39200 67.7 8.2e-192 667.2
Cmu02g2096 . 8 505 MLO family AT2G39200 67.1 1.2e-190 663.3
Cmu06g0054 . 6 419 MLO family AT4G24250 54.2 6.0e-117 417.9
Cmu09g1800 . 3 553 MLO family AT1G26700 68.2 1.1e-212 736.5
Cmu11g1807 . 1 532 MLO family AT1G26700 68.3 1.9e-209 725.7
Cmu06g0054 . 5 501 MLO family AT2G44110 59.5 1.9e-165 579.3
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006348 3 0 2 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3 2 1 36