Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu10g0959 ATGTGGGCCCAGGCTGTCCTCCGTGAGAATCAGCGAGTGATAGTGGAGTTAGAGAATGTCTTGTTTCTCAGTGTAACTGCAGAAATTAAGCGAGAATATGCTCTGTTCGGCGATATTTTAGGGATTTTGATTGCTGTTGTTGTTGGTTGTCATTGCTTAGTGGCGAAGAATTTTCTTGGCAGCCAAACAGTGTGCGGCGGATTTCAGTTCTATTTTCGGTGGATAAAAGCTTCGAGAGTAAAAAAAAGGCAAAACGACGGGGGTGAGGATGGGGCTGCGCGTGGGAGTGGCACGCCTAGTACAAAGGAAGCCGTCAAAAGCCTGACAACGCAGATAAAGGACATGGCGTTGAAATTCTCTGGTGCTTATAGGCAGTGCAAACCCTGCACAGGCTCCAGTAGCTATAAGAAAGGACAGAGACCTTACCCAGATTTTGACACAGCTTCAGAAGGGGTACCATACCCTTACATAGGAGGGGCAAGTGCAAGTTCAACTCCTGCTTGGGACTTCCCTCCTGTTAATCGGCACCCACATGTCAGATCTGAGTCTAGATTTAAAGGGACTTTCAGAGGAGATCAGACCCCTGGAGGCGATTCCACCATATCAGCATGTGATGTGGTGCTTGAGGATGAGGATGAGCCGAAAGAGTGGATGGCACAGGTGGAGCCTGGTGTTCACATTACTTTTGTGTCCCTACCCAATGGAGGCAATGATTTAAAACGAATTCGTTTCAATCGAGAAATGTTTAACAAATGGCAAGCTCAGCGATGGTGGGGAGAGAACTATGATAGAATAACGGAGCTCTATAATGTCCAGAGATTCAATCAACAAGCTCTTCATACGCCACCGAGAACTGAGGACGGGAGGGATTCTTCATACTCAAAGATGGGAAGGGACAGTCCGATGACTTCCGCAAACAAAGATTGGACGCCGAGAAACTATAAACCTTCTGGAAGTAAAGGATTTCCATCTGACCAGCATTTTGATCATGGAAGCAGCCACCCCTATGCAGGCTCAAGTGCCTACCCAGCAGGCAGCACCAAAGGTGACATGTCGTCTATGGAAGCATCACGCACAACTACCTCTTCTAGAGACGAACCTTCAATTTCCATTAGCAATGCAAGCGACATCGAGGCAGAATGGGTCGAGGAAGATGAGCCGGGGGTCTATATAACTATCAGGCAGCTTGTTGATGGCACTAGAGAGCTTCGTCGTGTTAGATTCAGCCGTGAAAGGTTCGGGGAAATGAACGCAAAGCAATGGTGGGAACACAACAGGGAGAGGATCCAAGCTCAATACCTATAA 1305 47.74 MWAQAVLRENQRVIVELENVLFLSVTAEIKREYALFGDILGILIAVVVGCHCLVAKNFLGSQTVCGGFQFYFRWIKASRVKKRQNDGGEDGAARGSGTPSTKEAVKSLTTQIKDMALKFSGAYRQCKPCTGSSSYKKGQRPYPDFDTASEGVPYPYIGGASASSTPAWDFPPVNRHPHVRSESRFKGTFRGDQTPGGDSTISACDVVLEDEDEPKEWMAQVEPGVHITFVSLPNGGNDLKRIRFNREMFNKWQAQRWWGENYDRITELYNVQRFNQQALHTPPRTEDGRDSSYSKMGRDSPMTSANKDWTPRNYKPSGSKGFPSDQHFDHGSSHPYAGSSAYPAGSTKGDMSSMEASRTTTSSRDEPSISISNASDIEAEWVEEDEPGVYITIRQLVDGTRELRRVRFSRERFGEMNAKQWWEHNRERIQAQYL 434
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1515878 1522354 - CmPI595203_10g009590.1 Cmu10g0959 426489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu10g0959 434 MobiDBLite consensus disorder prediction 276 372 - -
Cmu10g0959 434 PANTHER PROTEIN BREVIS RADIX-LIKE 1 82 434 IPR044532 -
Cmu10g0959 434 MobiDBLite consensus disorder prediction 296 320 - -
Cmu10g0959 434 Pfam Transcription factor BRX N-terminal domain 96 129 IPR027988 -
Cmu10g0959 434 Pfam Transcription factor regulating root and shoot growth via Pin3 378 433 IPR013591 -
Cmu10g0959 434 Pfam Transcription factor regulating root and shoot growth via Pin3 215 269 IPR013591 -
Cmu10g0959 434 MobiDBLite consensus disorder prediction 345 372 - -
Cmu10g0959 434 MobiDBLite consensus disorder prediction 84 104 - -
Cmu10g0959 434 ProSiteProfiles BRX domain profile. 215 270 IPR013591 -
Cmu10g0959 434 ProSiteProfiles BRX domain profile. 379 434 IPR013591 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu10g0959 Cmu-Chr10:1515878 Cmu11g0154 Cmu-Chr11:2032629 8.90E-50 dispersed
Cmu10g0959 Cmu-Chr10:1515878 Cmu09g0085 Cmu-Chr9:1043685 2.20E-64 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu10g0959 - - - 0.0