Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu10g0988 | ATGAGCTTTCAAGATATCGAGGCTGGTCGCCCCTTTGCGTCTTCGAGGAGAGACCTCATCAATGGCAAACAAGATCCCACGCAAGCCGTTGCTTCGGGTATATTTCAGATTAATACTGCCGTCGCTACGTTTCAGAGGCTTGTTAATACCTTAGGAACGCCGAAGGATACGCCTGAGCTACGAGAGAAGCTGCACAAGACCAGGTTACATATTGGACAGTTGGTTAAAGATACATCCGCTAAACTTAAACAAGCCAGCGAAATAGATCATCACGCTGAAGTTAATGCCAGCAAGAAAATTGCAGATGCTAAACTTGCGAAAGATTTTCAAGCAGTGTTGAAGGAATTTCAGAAGGCTCAACGACTTGCAGCTGAGAGGGAAACAGCATATACACCTTTTGTTCCCCAAACTGTTCTACCTTCTAGCTACACAGCCGGCGAGGCAGATGCAAGCTCAGAAAAGAATCTTGAACAGCGTGCCCTCCTTGTGGAATCCAGGAGACAAGAGGTCTTGCTGTTAGACAATGAAATAGCCTTCAATGAGGCAATAATTGAGGAAAGAGAGCAAGGCATTCATGAAATCCAGCAGCAAATTGGAGAAGTGAATGAAATCTTTAAAGATCTTGCAGTTCTAGTCCATGAACAGGGAGCTATGATTGATGATATTGGATCCAACATAGAGGGTGCCCATGCTGCAACGTCACAGGGAACAACTCAGCTTGCAAAAGCTTCAAAGACACAAAGATCAAATTCATCTCTGGCATTGGAGTACTTGTGTTTCATGCATAAGAACCACAAACATGATAACTCTGTCAGATCGATTCTCCTGTTAGTTTCTTTTGATAAGTTTACATTGTCTTGGATCCTGTCTTCTGGGGAAAGGAAGGGTAGTGAAGGGGCTCTATGTATACTATGTCGATCCGCCTTCAGAGTATACATCGCTTCTGTCAGGCCGACCATCCTCTTCCATTTGAAAATGTTATAA | 984 | 43.9 | MSFQDIEAGRPFASSRRDLINGKQDPTQAVASGIFQINTAVATFQRLVNTLGTPKDTPELREKLHKTRLHIGQLVKDTSAKLKQASEIDHHAEVNASKKIADAKLAKDFQAVLKEFQKAQRLAAERETAYTPFVPQTVLPSSYTAGEADASSEKNLEQRALLVESRRQEVLLLDNEIAFNEAIIEEREQGIHEIQQQIGEVNEIFKDLAVLVHEQGAMIDDIGSNIEGAHAATSQGTTQLAKASKTQRSNSSLALEYLCFMHKNHKHDNSVRSILLLVSFDKFTLSWILSSGERKGSEGALCILCRSAFRVYIASVRPTILFHLKML | 327 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 1864115 | 1868749 | + | CmPI595203_10g009880.1 | Cmu10g0988 | 426518 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu10g0988 | 327 | Gene3D | - | 21 | 134 | - | - | |
Cmu10g0988 | 327 | Pfam | Syntaxin-like protein | 30 | 130 | IPR006011 | GO:0016020(InterPro) | |
Cmu10g0988 | 327 | FunFam | Syntaxin-22 like | 174 | 263 | - | - | |
Cmu10g0988 | 327 | PANTHER | SYNTAXIN | 36 | 252 | IPR045242 | GO:0000149(PANTHER)|GO:0005484(PANTHER)|GO:0006886(PANTHER)|GO:0006906(PANTHER)|GO:0012505(PANTHER)|GO:0016021(PANTHER)|GO:0031201(PANTHER)|GO:0048278(PANTHER) | |
Cmu10g0988 | 327 | FunFam | Syntaxin-22 like | 21 | 134 | - | - | |
Cmu10g0988 | 327 | Pfam | SNARE domain | 218 | 253 | IPR000727 | - | |
Cmu10g0988 | 327 | SUPERFAMILY | t-snare proteins | 24 | 236 | IPR010989 | GO:0016020(InterPro)|GO:0016192(InterPro) | |
Cmu10g0988 | 327 | ProSitePatterns | Syntaxin / epimorphin family signature. | 187 | 226 | IPR006012 | GO:0005484(InterPro)|GO:0006886(InterPro)|GO:0016020(InterPro) | |
Cmu10g0988 | 327 | SMART | SynN_4 | 16 | 128 | IPR006011 | GO:0016020(InterPro) | |
Cmu10g0988 | 327 | CDD | SNARE_Qa | 184 | 242 | - | - | |
Cmu10g0988 | 327 | CDD | SynN | 24 | 147 | IPR006011 | GO:0016020(InterPro) | |
Cmu10g0988 | 327 | SMART | tSNARE_6 | 176 | 243 | IPR000727 | - | |
Cmu10g0988 | 327 | Gene3D | - | 185 | 252 | - | - | |
Cmu10g0988 | 327 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 181 | 243 | IPR000727 | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu10g0988 | - | - | - | 0.0 |