Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu10g1022 | ATGGCTGGATTGGATTTAGGGAGTCGATATCTAACTCACCTTCAAACGCCAGTAGACGATCTAGTAAATCGTAGTGGTCATTTCTCTTCCGGTGACCACCAAGACGATGACGATCCCCATCAAGCCCTTGGTGGCCCGGGGGACGTCGTTGGCCGCCGCCCTCGCGGACGGCCACCCGGTTCGAAAAACAAGCCAAAGCCACCAGTAATCATCACCCGTGAGAGCGCCAACACACTACGTGTCCACATCTTAGAGGTCGGGAGTGGCTGCGACGTTTTCGATTGCGTCGCCTCCTATGCCCGCCGGCGACAGCGTGGGATCTGTATTTTGAGTGGCAGCGGTAACGTCACCAACGTTGGCCTCCGCCAGCCAGCGGCGGCAGGGGCGGTGCTGACTCTTCAAGGGAGGTTTGAAATTTTGTCGCTTTCTGGGTCGTTTCTGCCGCCGCCCGCTCCACCTGGCGCCACAAGTTTGACGATATTTTTAGCCGGAGGACAGGGGCAGGTTGTGGGAGGGACGGTGGCCGGGGAATTAACGGCGGCCGGGCCAGTGATTTTGATTGCAGCTTCTTTTACTAATGTGGCGTATGAGAGATTGCCACTGGATGAGGAGGATCAGCAGCAAGCTCCGGCAGGCGGCAGCGGCGGAAGCAGCGGCGGAGTGGGTAATAACAACAATAATCCATTTCAAGACCCATCAAATTCAGGGCTTCCATTCTTGAATTTGCCACTGCATATGCAAAATGTTCAACTTCCACCCTTTTGA | 765 | 55.69 | MAGLDLGSRYLTHLQTPVDDLVNRSGHFSSGDHQDDDDPHQALGGPGDVVGRRPRGRPPGSKNKPKPPVIITRESANTLRVHILEVGSGCDVFDCVASYARRRQRGICILSGSGNVTNVGLRQPAAAGAVLTLQGRFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQVVGGTVAGELTAAGPVILIAASFTNVAYERLPLDEEDQQQAPAGGSGGSSGGVGNNNNNPFQDPSNSGLPFLNLPLHMQNVQLPPF | 254 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 2183337 | 2184101 | - | CmPI595203_10g010220.1 | Cmu10g1022 | 426552 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu10g1022 | 254 | Gene3D | - | 79 | 208 | - | - | |
Cmu10g1022 | 254 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 35 | 222 | IPR014476 | GO:0003680(PANTHER)|GO:0003680(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER) | |
Cmu10g1022 | 254 | MobiDBLite | consensus disorder prediction | 210 | 236 | - | - | |
Cmu10g1022 | 254 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 80 | 192 | IPR005175 | - | |
Cmu10g1022 | 254 | ProSiteProfiles | PPC domain profile profile. | 76 | 212 | IPR005175 | - | |
Cmu10g1022 | 254 | FunFam | AT-hook motif nuclear-localized protein | 79 | 206 | - | - | |
Cmu10g1022 | 254 | CDD | DUF296 | 80 | 191 | IPR005175 | - | |
Cmu10g1022 | 254 | MobiDBLite | consensus disorder prediction | 205 | 236 | - | - | |
Cmu10g1022 | 254 | PIRSF | ESCAROLA | 8 | 250 | IPR014476 | GO:0003680(InterPro) | |
Cmu10g1022 | 254 | MobiDBLite | consensus disorder prediction | 22 | 70 | - | - | |
Cmu10g1022 | 254 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 76 | 206 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu05g0282 | Cmu-Chr5:2403443 | Cmu10g1022 | Cmu-Chr10:2183337 | 3.50E-78 | dispersed | |
Cmu06g0068 | Cmu-Chr6:641386 | Cmu10g1022 | Cmu-Chr10:2183337 | 4.50E-78 | dispersed | |
Cmu10g1022 | Cmu-Chr10:2183337 | Cmu11g0675 | Cmu-Chr11:7436826 | 4.90E-48 | dispersed | |
Cmu10g1021 | Cmu-Chr10:2167894 | Cmu10g1022 | Cmu-Chr10:2183337 | 1.70E-11 | tandem | |
Cmu10g1022 | Cmu-Chr10:2183337 | Cmu09g1156 | Cmu-Chr9:12476026 | 1.30E-80 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu10g1022 | - | - | - | 0.0 |