Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu10g1030 ATGGGAAGCGGAGTCTCCAGCCTCTTCTCGTGCCTCAAGCCGGAGACTCGCCCCGCCGCTCTTCCCGCCGACAATTCCGACATCCTCTTCTCCGCTTCCGAGCCACTTGACGAAACCCTAGGCCATTCCTTCTGCTACGTCCGCTCTTCCAACCGTTTCCTCTCTCCTTCTCATTCCGATCGCTTTCTTTCCCCTTCTCAGTCTCTTCGTTTTTCCCCTCCCCACGAACCACCACTCGGTTCTAGGACTAGAACTGGCCCGCCGGAGACTGCCTTCAAGGCCATCTCGGGCGCTTCTGTCAGTGCTAATAGTTCTATTCCCAGATCTGTTCTTATGCTTGATGCTGTTTACGACGATGCCACTGACACTACGCTTGGGGCTTCTGGTGGTGGTTGTGGAGTCAGAGGGAGTATTCTTAATGGCTTTGAGAGTACTTCTTCTTTTACTGCTCTTCCGCTTCAGCCCGTCCCCAGAGGTGGGACTGAGCCTTTGGAACGAGGTGGGTTCTTTCTCTCTGGTCCAATTGAGCGTGGGGCGCTGTCTGGTCCGCTCGATGCTAATGTTGATGGTGCTGGTGCTGGTGGTGCTGGCGCCGGCGCTGGTGGTGGCAGTGGCGGTGGTGGGAGAGTCCATTTCTCCGCTCCGCTTGGTGGGATGTACGTGAAGAAGAAGAGGAAGAAGAGCATTTCGGGGTTTAGGAAGGCGTTTACGAGGAATTTTTCAGATAAGCGACCGTGGGTGGTGCCGGTGTTGAATTTCGTTGGCCGGAAGGAGAGCTCGACGGCGGGAGATGAGCCGGAGGTGAGGAATGAGAGTGATGTTCAATGGGCACTTGGGAAGGCTGGAGAGGATCGGGTACATGTGGTTGTATCGGAAGAGCAAGGGTGGTTGTTCGTTGGAATTTATGATGGGTTCAATGGCCCGGATGCGCCTGAATTCTTGATGGGTAATCTCTACAGAGCTGTCTTCAATGAGCTTCAGGGATTGTTTTGGGAAATTGACGATAATGAGGAGGCTGCGGCTGCTGCTAATTCGAACCCTTCGAATGTGGCTGAAGAGAGCACAGTCGGTGCGAACGAAACTAATGCTGACCCGTCCTCAAGAGCCGCTGGTCAAACCGTTGAAACTAACGGGAATGTTTCAGTAGTTGGAAATGAAGCGGAAGTGGAACAACCGGCTGCTGATCGAGGATCAGCAAAGAGGGTTACGTTTCAATCAGAGGATGTACCGGAGAACAGGCGGAGGCGGCGACTGTGGGAGTATTTAGCGGAGGACGATACACAGGAAGGACTTGATCTCTCGGGGTCAGATAGGTTTGCATTTTCTGTTGATGACGCTCTTAGTGTAAATAGTGCAGGTTCAGTAGCTGGTAGAAGGTGGTTGTTATTGTCCAAGTTAAAACAAGGGTTGTCAAAGCATAAGGAGGGTCATGTTAAGACTTTGTTCCCGTGGAAGTATGGTTTGGGAGATAAAGAGAAGGCTGAGGCTGAGAATAGGGTGGAGGAGACATCATATCGAAGTGGTAAGAGGAGAAAGGAAGGTTTAATTGATCATGAGTTGGTGTTGGGGGCATTGTCACGGGCTCTTGAGATAACTGAATTAGCATATTTGGACATGACAGATAAGTTGCTTGATACGAATCCAGAGCTTGCTTTGATGGGTTCTTGCTTGCTGGTTGTGTTAATGAGGGATGAAGATGTGTATGTAATGAATCTGGGTGACAGCCGTGCAATTGTAGCACAGTATGAGCAACAAGAAGTTGGGCCTAGTGAAGACATGAAGGAGGTGGGCCTCAAAAGAACGGGCATGGAGGGTATAATTGAGGAGTCTACAACAAGTGAAGGGAAAATAACTCAAACGAATCAACCTTCAGCTCAGACGACGAGATTGACTGCATTGCAGCTATCCACTGATCATAGCACAAGCATTGAAGAAGAAGTAAGAAGAATAAAGAACGAGCACCCTGATGACAAACAGTGCATCGTCAACGATAGAGTGAAGGGCCGTCTAAAGGTTACGAGGGCATTTGGTGCAGGATTTTTGAAACAGCCAAAATTGAATGATGCATTACTGGAAATGTTTCGGAATGAGTATATTGGTACCGCACCATATTTATCATGCTTGCCTTCTCTTCGTCACCATAGACTCTGCCCGACGGATCAATTCATAGTGCTGTCATCTGATGGATTGTATCAATACCTAACCAATGAAGAAGTGGTTTCTTATGTTGAGAACTTTATGGAGAAGTTTCCAGATGGAGACCCTGCACAGCACTTGATAGAGGAGCTTCTTTGCCGTGCAGCCAGAAAAGCAGGAATGGATTTTCATGAATTGTTGGACATACCACAGGGCGATCGAAGAAAGTATCATGATGATGTTACTGTTATGGTCATTTCACTTGAAGGAAGAATCTGGAAATCCTCAGGAAAATATCTTTGA 2439 48.79 MGSGVSSLFSCLKPETRPAALPADNSDILFSASEPLDETLGHSFCYVRSSNRFLSPSHSDRFLSPSQSLRFSPPHEPPLGSRTRTGPPETAFKAISGASVSANSSIPRSVLMLDAVYDDATDTTLGASGGGCGVRGSILNGFESTSSFTALPLQPVPRGGTEPLERGGFFLSGPIERGALSGPLDANVDGAGAGGAGAGAGGGSGGGGRVHFSAPLGGMYVKKKRKKSISGFRKAFTRNFSDKRPWVVPVLNFVGRKESSTAGDEPEVRNESDVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPDAPEFLMGNLYRAVFNELQGLFWEIDDNEEAAAAANSNPSNVAEESTVGANETNADPSSRAAGQTVETNGNVSVVGNEAEVEQPAADRGSAKRVTFQSEDVPENRRRRRLWEYLAEDDTQEGLDLSGSDRFAFSVDDALSVNSAGSVAGRRWLLLSKLKQGLSKHKEGHVKTLFPWKYGLGDKEKAEAENRVEETSYRSGKRRKEGLIDHELVLGALSRALEITELAYLDMTDKLLDTNPELALMGSCLLVVLMRDEDVYVMNLGDSRAIVAQYEQQEVGPSEDMKEVGLKRTGMEGIIEESTTSEGKITQTNQPSAQTTRLTALQLSTDHSTSIEEEVRRIKNEHPDDKQCIVNDRVKGRLKVTRAFGAGFLKQPKLNDALLEMFRNEYIGTAPYLSCLPSLRHHRLCPTDQFIVLSSDGLYQYLTNEEVVSYVENFMEKFPDGDPAQHLIEELLCRAARKAGMDFHELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYL 812
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2277504 2284259 - CmPI595203_10g010300.1 Cmu10g1030 426560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu10g1030 812 PANTHER PROTEIN PHOSPHATASE 2C 275 800 IPR015655 GO:0004722(InterPro)|GO:0006470(PANTHER)|GO:0006470(InterPro)
Cmu10g1030 812 MobiDBLite consensus disorder prediction 64 88 - -
Cmu10g1030 812 Gene3D - 252 807 IPR036457 -
Cmu10g1030 812 MobiDBLite consensus disorder prediction 340 374 - -
Cmu10g1030 812 MobiDBLite consensus disorder prediction 341 374 - -
Cmu10g1030 812 SUPERFAMILY PP2C-like 279 801 IPR036457 -
Cmu10g1030 812 ProSiteProfiles PPM-type phosphatase domain profile. 267 800 IPR001932 -
Cmu10g1030 812 SMART PP2C_4 267 798 IPR001932 -
Cmu10g1030 812 Pfam Protein phosphatase 2C 633 763 IPR001932 -
Cmu10g1030 812 CDD PP2Cc 512 800 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu04g0856 Cmu-Chr4:23096116 Cmu10g1030 Cmu-Chr10:2277504 1.90E-120 dispersed
Cmu05g0668 Cmu-Chr5:5776213 Cmu10g1030 Cmu-Chr10:2277504 4.50E-59 dispersed
Cmu10g1030 Cmu-Chr10:2277504 Cmu10g2790 Cmu-Chr10:34491879 8.10E-28 dispersed
Cmu10g1030 Cmu-Chr10:2277504 Cmu02g2011 Cmu-Chr2:33857304 7.60E-135 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu10g1030 - - - 0.0