Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu10g1075 ATGGGTAAGAATTCATATTTTGACGACGCGGTGTCGATCAGCTACCGGAAGAACATCAATTGTGGAGGGGAGAGCCATTCTGAATGTCGCGTTCTGATTTCATCACGACAACCAATTTCTCCTACTGTTCAACGTTTCTTCAATTCTGAAGTCCTCAGAATTTCAATTGAGTTCGCTCGCCACTTCCATGGTTTCTGTTGCCGTCTCGTTCTCTTGACTGGTGATGTTGAAGTTGGGCATAAATGTCTATGCAAAAAGAGTCTTGGAGTAAGGGAGTTGAAGAATCTGTTTTCTATCACATACTATGAGAAACGTTGTGAAAATATTCACGAAGGGTCTTTCTGTAATTTGGACCTTGGTTGGAAGGTCAGGGGGACAAAGGAAAAGAGGAATATGTTGGTGAACAAGATACGGCTCAACAAAGGTGGGTCTTGGCATCCTAACCTTGTGGAGGATGAAGGGAAGAATAAAGTGCTATTGCATCCTGGAAGTGGACAGCTTGGTTTTGGATGCCAGGGTGGTGAAGAAGGCAAGAATACTGAGGAAGGAGTTTTATCAGATGTCCCCGTGGGGACAAAGAGGAAAGACTTTTGGATATTATTTGGGATGAACTGTGTTAGTGTTTCTGAAGTTGGTGTCCCCGCTGCAATCGCATCTGGGTTATTGTTATTTTCAAGGGTTGGGCCCGCGGATGTACCCACTGAAGCTGGTGCCCCTGCTGCAATCACATTTGGGTTATTGTTATTTTCGGGGGCTGGGCCCGCCGATGTACCCACTGAAGCTAGTGCCACATTCGAGGGCCCCGCTCCCTCCACACTGGGAATCACCGAAGAGGCAACGACAGCTGAAGATAGTCTCCTAATATATTGCAAACCGGTTGAACTATACAACATTCTTCATCTTCGTTCCCTTAACAATCCTTCTTTTCTTCGACGTTGTTTGCATTACAAGTTACAAGCTAGGCGAAAAGAGAGGGTGAGCACTGGAGTTGTAATTTTCAACTATAGGGACTACAACAACATAGTTCGAAAAACTGAAGTGACTGAAGACTTCTCATGTCCATTTTGTTTGATGCTATGCGCAAGCTTTAAGGGTTTGCGCTACCACTTATGCTCTTCCCATGATATGTTCAACTTCGAATACTGGGTGACTGAAGAATATCAGGCGGTGAATGTCTCTGTGAAAATTGATGTCTTTAGATCTGAGACTGTAGCAGATGGAGTGGACCCACAACTACAAACTTTCTTCTTCTGCACAAGACCACGAAAGCGCAAGTTAAAGAACTCTATGCAGAATGGGAAGTATGTGCAGTTTTTGGAGATGGACTCACCTGGACCTGCCACAGAAGGCATGCACAAGGGATTTGTCGGGCATAACGCTGATGGTGTATCCTGTGAAAAAGAGGGGAGCCATTCATTCCCCATTGAGACTTATTTGCAGAATGCACAACAAGACGGAGAAAATATTGGCCCTGAATGTCCTTCCTCTATGGAGTGCATTGAACGTGTTGCATCCAGCTCAAATATTCCAGGTGTCTCAATGGCTATCAATCAATCTTCTACAGGTCCTGAATGTTATAAAGTACTGTCTGGAAGTGATCATTTACAACCAGCCAAAGCAAGGAAGTTAACAGTAGAACGAGACCCTAGAAACCGCATGCTCTTGCAGAAACGGCAGTTTTATCACTCTCACAGGGTTCAGCCTATGGCTCTAGATAAAGTACTATCCGACAAAGATAGTGAGGACGAAGTAGATGATGACATTGCAGATTTCGAAGACCGAAGGATGCTCGATGATTTCGTGGATGTCACCAGAGATGAAAAGCGGCTTATGCATCTATGGAACTCCTTTGTTAGAAAGCAAAGGGTGCTAGCTGATGGTCACGTGCCGTGGGCATGTGAAGCATTCTCAAAACTTCATGGGAAAGAGCTTATCTCATCTCCGCCTCTCTTTTGGTGTTGGAGACTATTCATGATCAAGCTCTGGAATCATGGTCTTCTTGATGCATCTACCATGAACAACTGTAATTTAACTCTTGAAGGATTCAAAGATGAGAGTTTGAATGCGACGAAAAACTGTAGAGGAGATGACGATTAG 2097 44.4 MGKNSYFDDAVSISYRKNINCGGESHSECRVLISSRQPISPTVQRFFNSEVLRISIEFARHFHGFCCRLVLLTGDVEVGHKCLCKKSLGVRELKNLFSITYYEKRCENIHEGSFCNLDLGWKVRGTKEKRNMLVNKIRLNKGGSWHPNLVEDEGKNKVLLHPGSGQLGFGCQGGEEGKNTEEGVLSDVPVGTKRKDFWILFGMNCVSVSEVGVPAAIASGLLLFSRVGPADVPTEAGAPAAITFGLLLFSGAGPADVPTEASATFEGPAPSTLGITEEATTAEDSLLIYCKPVELYNILHLRSLNNPSFLRRCLHYKLQARRKERVSTGVVIFNYRDYNNIVRKTEVTEDFSCPFCLMLCASFKGLRYHLCSSHDMFNFEYWVTEEYQAVNVSVKIDVFRSETVADGVDPQLQTFFFCTRPRKRKLKNSMQNGKYVQFLEMDSPGPATEGMHKGFVGHNADGVSCEKEGSHSFPIETYLQNAQQDGENIGPECPSSMECIERVASSSNIPGVSMAINQSSTGPECYKVLSGSDHLQPAKARKLTVERDPRNRMLLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTRDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKELISSPPLFWCWRLFMIKLWNHGLLDASTMNNCNLTLEGFKDESLNATKNCRGDDD 698
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2959293 2978019 + CmPI595203_10g010750.1 Cmu10g1075 426605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu10g1075 698 CDD ZnB-Zn_EMF2-like 277 399 - -
Cmu10g1075 698 Pfam VEFS-Box of polycomb protein 547 676 IPR019135 -
Cmu10g1075 698 CDD VEFS-box_EMF2-like 555 681 - -
Cmu10g1075 698 PANTHER POLYCOMB GROUP PROTEIN 277 325 - GO:0005634(PANTHER)|GO:0031490(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu07g1671 Cmu-Chr7:32045908 Cmu10g1075 Cmu-Chr10:2959293 6.00E-10 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu10g1075 - - - 0.0