Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu10g1085 | ATGAATGGATTTTATTCGGGGTCGATCGTCATTCCTGTTGATCAATCGCAGCTTCCATCGACTTCTTCTTTTCCGGCTGCCGGGACGGTGGCGACTTCTGTGAGAATTTCGTTATCTGTATTTCTTCCGTCGAGATCTTCTCCGATTTTTCCATTACTGGGGTTTGGTTTAGGAATGAATGTTAGGGGCTTTTTATTTAAGGCTATGTATATTGAGGAACTGAAGGAAGGGGAGTTGCAGAGTGGGGAAGAGGGGAATTCAGGGGTTATTGTTAGTAATTTCGAGAGTCAGAGCATTGTTAGGTCTGATGTGAAAAGGATCGTTGTTGGAGTTGGGGCTCGTGTACTTTTCTACCCGACTTTGCTTTACAATGTTTTTAGAAATAAGCTTCAGACGGAGTTTCGTTGGTGGGACAAGGTTGATGAGTTTATATTGTTAGGTGCTGTTCCATTCCCTGCTGATGTTCCCCGTTTGAAGGAGGTTGGCGTTCGAGGAGTGATAACACTAAATGAGCCATATGAGACTCTGGTTCCTTCAACTCTATATCGTGATCATGGAATTGATCATCTGACCATTCCGACAAGGGACTATTGCTTTGCACCTTTATTGAGTGACATTTGCATTGCTGTAAATTTCATCCACAAAAATGCATCACATGGACAGACTACATATGTTCACTGTAAAGCTGGACGAGGGCGTAGCACAACCATTGTTATTTGCTATCTGGTGCAATACAAGCAAATGACGCCAGATGAAGCTTATAAGCATGTGAAATCAATCAGGCCAAGGGTGCTTTTAGCATCATCACAGTGGCAGGCTGTCCTGGAATTCTACCACCTGATTGTGCAGAAGGATGTTTCCTTCTGCCACATAGATGATCTAGGAAAGGAACTATCAGGATCATCGCATGATCTTATCGCATTTGATGATAGTTCTGTAGTTGTTGTAAAAGAATCCGATCTAGATGGATATGACCAAAGTATCAGCCAAAGTGACATGGGTGATATCTGGGCAGATTTAAGTGTGGTCTGCAGGGTTCGTGTTGCTGGTCAGGCAGCCCTCACAAGAATCTCTTGTTTGTGGCTCAGCTATCGAGCAAAACACCATAGCCAGAAGATTTCAGGAGATGATCTAGGCGTGGGGAAGGGCTGTTCACTTAGTGCTACTCATTTGGAAGGGTTCAGTGTGGACATCCATGTCTATTAA | 1206 | 43.78 | MNGFYSGSIVIPVDQSQLPSTSSFPAAGTVATSVRISLSVFLPSRSSPIFPLLGFGLGMNVRGFLFKAMYIEELKEGELQSGEEGNSGVIVSNFESQSIVRSDVKRIVVGVGARVLFYPTLLYNVFRNKLQTEFRWWDKVDEFILLGAVPFPADVPRLKEVGVRGVITLNEPYETLVPSTLYRDHGIDHLTIPTRDYCFAPLLSDICIAVNFIHKNASHGQTTYVHCKAGRGRSTTIVICYLVQYKQMTPDEAYKHVKSIRPRVLLASSQWQAVLEFYHLIVQKDVSFCHIDDLGKELSGSSHDLIAFDDSSVVVVKESDLDGYDQSISQSDMGDIWADLSVVCRVRVAGQAALTRISCLWLSYRAKHHSQKISGDDLGVGKGCSLSATHLEGFSVDIHVY | 401 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 3080578 | 3085170 | - | CmPI595203_10g010850.1 | Cmu10g1085 | 426615 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu10g1085 | 401 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 204 | 272 | IPR000387 | GO:0016311(InterPro) | |
Cmu10g1085 | 401 | FunFam | Dual specificity phosphatase domain protein | 136 | 283 | - | - | |
Cmu10g1085 | 401 | SMART | dsp_5 | 139 | 280 | IPR020422 | GO:0006470(InterPro) | |
Cmu10g1085 | 401 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 136 | 283 | IPR020422 | GO:0006470(InterPro) | |
Cmu10g1085 | 401 | Pfam | Dual specificity phosphatase, catalytic domain | 176 | 278 | IPR000340 | GO:0016311(InterPro) | |
Cmu10g1085 | 401 | Gene3D | Protein tyrosine phosphatase superfamily | 136 | 286 | IPR029021 | - | |
Cmu10g1085 | 401 | PANTHER | PHOSPHATIDYLINOSITOL PHOSPHATASE | 69 | 356 | - | - | |
Cmu10g1085 | 401 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 225 | 235 | IPR016130 | GO:0016311(InterPro) | |
Cmu10g1085 | 401 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 130 | 282 | IPR029021 | - | |
Cmu10g1085 | 401 | CDD | PTPMT1 | 136 | 278 | IPR044596 | GO:0004721(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu10g1085 | Cmu-Chr10:3080578 | Cmu11g0192 | Cmu-Chr11:2394443 | 1.20E-80 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu10g1085 | - | - | - | 0.0 |