Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu10g1098 ATGGAAGATTTTGCAATAATGAGTGGGTTGGTTGGAGTGCAATTTGTATATGCTGGCAACTCTGTTTTTATGAGCTTTCTTATGTCTTTGGGAATTCATCCTTCAACTCTTGTCATCTTCTCTACATTCTCCACTTTTCTCATTGTCTCTCCCATTGCTATTTATTTTGAAAGATATAACTGGCCAAAGAAACTTAGTCTAAAGTTGATTCTTCAGCTTCTTCTCATATCTTTTGGAGGGGTAACATTGTTTCAGTCCCTTTTTCTGAAAGGAATACAGCTAACATCGCCGACTTTAGCAACGGCGATGCCGAATCTCGCCCCGGGACTCATCTTTGCCATTGCTTGGATCTTTAGATTAGAAAAAGTTCAGCTAAGTTGCATCTATAGCAAGATCAAGATTTTAGGTACATTTCTATGTGTGGTTGGCGCCTTCACCATGAGCATAATGCACACAGTGTCATCGGATGCAGCTGCAAAAGACAATATCCCACGAGAATCACCTCCGACCGAGCAAGTGTTCGATGAACAGAAGATCCTCGGTTGTGTGTATCTCTTCTCAGCGATCGTCGTTTTATCTAGCATAGTTGTTTTGCAGGCATCGACACTAGGGGATTTCCCAGCACCGATGTCGTTGTGTGCAATAACGTCTCTCATTGGAGTGCTATTAACCATAGGTGTACAGATAGTTGAATATCAGAAACTGGACATTGGTTGGCCACTTCTCAGTGTTAAGGAATTGGTTGCCTATTTTGTTGTAGGCGGAAGCATTAGCGGCGCTTGTGTGAGCTTCAACGGGTGGGCAATGAAGAAACGAGGGCCAGTTTTGGTGTCGATGTTTAGTCCGATCGGAACCGTTTGCTCACTCATTCTCTCAATTTTCACCTTGGGAGAATCCATCAACATTGGGAGCCTTGCTGGTATGTTCCTCATGTTCACCGGCCTCTACTTCGTCCTATGGGCGAAAGCGAAGGAGCGTTACGCCAACCGAAACCGTCCCGAGAAAACTTGA 1011 44.21 MEDFAIMSGLVGVQFVYAGNSVFMSFLMSLGIHPSTLVIFSTFSTFLIVSPIAIYFERYNWPKKLSLKLILQLLLISFGGVTLFQSLFLKGIQLTSPTLATAMPNLAPGLIFAIAWIFRLEKVQLSCIYSKIKILGTFLCVVGAFTMSIMHTVSSDAAAKDNIPRESPPTEQVFDEQKILGCVYLFSAIVVLSSIVVLQASTLGDFPAPMSLCAITSLIGVLLTIGVQIVEYQKLDIGWPLLSVKELVAYFVVGGSISGACVSFNGWAMKKRGPVLVSMFSPIGTVCSLILSIFTLGESINIGSLAGMFLMFTGLYFVLWAKAKERYANRNRPEKT 336
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3277934 3280041 + CmPI595203_10g010980.1 Cmu10g1098 426628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu10g1098 336 PANTHER WAT1-RELATED PROTEIN 11 326 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cmu10g1098 336 Pfam EamA-like transporter family 180 319 IPR000620 GO:0016020(InterPro)
Cmu10g1098 336 Pfam EamA-like transporter family 10 148 IPR000620 GO:0016020(InterPro)
Cmu10g1098 336 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 148 - -
Cmu10g1098 336 SUPERFAMILY Multidrug resistance efflux transporter EmrE 242 323 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu10g1098 Cmu-Chr10:3277934 Cmu10g2202 Cmu-Chr10:28098525 2.20E-19 dispersed
Cmu01g0401 Cmu-Chr1:4201932 Cmu10g1098 Cmu-Chr10:3277934 3.10E-109 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu10g1098 - - - 0.0