Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu10g1111 ATGCAAAGAAAAATGGGGAAGGGGGAGTTGGAATTTTCAGCCGCTTTTTCTTCTTCTTCTCCGATTTGCTCTGGTTTTGCAGAAAAGTGGGTTAAGAAAGGGGAAGAACAACAAGAACAAGAACAAGAACTAGAAGAAGAACAAGAAGAAGGGCTTTCTTATTTTGTTTTACCCAACAACGAACCCACTTCCGTTCTTCATATGAGAAGCCCCAGTCCTCCCACATCGGCTTCTACTCTCTCTTCTTCCTTTGGTGGCGGTGGCGGTGGCGGTGGTTGTGTTCCTTCACTTCCTCCGGAGACTCCTGCTGTTGAACCGGTCGCCGGAACTGGTGTTGGGAACGCCATTTTCCCAGGTGGATTGGAGCGATGTGGGGTTGGATTGGAAGATTTGGAGAGTATGTGGTCGGAAACAGCCGGCCCAGAACAGTCGTTTCTCCGATGGATCGCCGGAGATGTTGTTGAAGATCCCAGTCTAGGGAGTAAAAGTGTTTTGCACAATGGGAATATACCCTTTGATTTGGATGGCAATGCCGGTATCGGAATGGTCGATCAGGGTTCCGAATTCGACACCGGTGCTGGTAATGTTCTCGCCAACATTAATCCTAATTTATCGTTTCCCCTTGCTGCTTGTGCTGGGTTTTCTGATGTTAATGTTAACAATAAGTCTCTTAGTAGAAGCACTTGTGGGGGGGTTGTTAATTACAAGAGTTCTAGTTTGGGTTTGAACAATCGCCATGGAAATTTCAATGTTCAGAACCCTATCTTTACTGGTTCTCTTGAAAATCTTCTTGTTCCTGTTTCTGGGATGATTTATCCTCAGCAACTTCAGCCATTTGAGAGTCCTGATGAGAAACCTCAGAATTTGAATACTCACGTTTTGTTGAACCAACATCAGCAGCCTCAGAACCCTAGTTTTTTTGTGCCATTGACGTTTGGTCAACAGGAACAGCAGCTCCAGCCTCAACTGAAGAGGCACAATTCGAGTGGAGGACTCGACCCCAACCCAAACGGGCAGATCCCGAAGGTTCCGTTTATGGATCCAGGGAATGAGATTTTTCTGAGGAATCATCAGTTGCAAGTGTTGCAACAGCAGCAGCAGCAGCAGCTTGGTTATCCACCGGGTTTGCAGTTTCTTCCTCAGCAGAAGGCAATGTCGCCAAAGCCGAAAGTTGTAGGGCTTGGCGACGAAATGGCGTATCACAATCCCCCACAGCAACAGCATCAGCAACATGCTTTGCTCGACCAGCTCTACAAGGCAGCAGAGCTGGTAGGGACTGGGAATTTCTCACACGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCACCTGTTGGAAAGCCCCTTCAAAGGGCTGCTTTCTACTTCAAGGAGGCTCTTCAATTGCTCCTCCTTTTGAACAACCCAGTTAATCCTCCTCCACCTCGCTGCCCGACACCATTTGATGTGATCTTCAAGATGGGTGCTTACAAGGTGTTTTCCGAAATCTCCCCACTCATTCAGTTTGTGAATTTCACCTGCAACCAGGCACTGCTTGAGGCCCTCGATGACGTTGATCGAATTCACATTGTAGATTTCGATATTGGTTTTGGAGCTCAGTGGGCTTCTTTTATGCAGGAACTGTCCTTGAGGAACCGGGGTGCACTGTCACTCAAAATCACTGCTTTTGCCTCTCCCTCCACTCACCATCCAATTGAACTCGGGCTTATGCGTGAAAATCTTACTCAATTTGCTAATGACATTGGAATAAGTTTTGAGTTCGAAGTGGTTAACTTTGATTCTTTGAACCAGAACTCCTTTCCATTGCCATTTCCTCGAGCAAGCGAAAATGAGGCTATTGCAGTAAACTTCCCTTTATGGTGCTCATCAAATCAGCCAGCGATGCTTCCGTCTCTCCTCCGTTTCATCAAGCAACTCTCACCGAAAATTGTGGTCTCACTGGACCGAGGGTGCGATCGAAGTGACCTTCCATTTCCTCAGCATATGCTTCAGGCCCTTCAGTCCTATATTAACCTCCTGGAATCTCTGGATGCTATCAATATGAATTCGGATGCCGTGAACAAGATTGAGAGGTTTCTTTTGCAACCCAGAATTGAAAGCACCGTCCTGGGACGGCTTCGAGCACCTGAAAGAATGCCCCTTTGGAAGACACTCTTTGCCTCTGCTGGGTTTACGCCTGTAACCTTTAGCAACTTCACTGAAACTCAAGCAGAATGTGTAGCAAAGAGAACTTCTGTGAGGGGATTTCACGTCGAGAAACGCCAGGCTTCCCTAGTTTTATGCTGGCAGCGCCGGGAGCTCATATCTGCTTCAGCTTGGAGGTGTTGA 2331 47.49 MQRKMGKGELEFSAAFSSSSPICSGFAEKWVKKGEEQQEQEQELEEEQEEGLSYFVLPNNEPTSVLHMRSPSPPTSASTLSSSFGGGGGGGGCVPSLPPETPAVEPVAGTGVGNAIFPGGLERCGVGLEDLESMWSETAGPEQSFLRWIAGDVVEDPSLGSKSVLHNGNIPFDLDGNAGIGMVDQGSEFDTGAGNVLANINPNLSFPLAACAGFSDVNVNNKSLSRSTCGGVVNYKSSSLGLNNRHGNFNVQNPIFTGSLENLLVPVSGMIYPQQLQPFESPDEKPQNLNTHVLLNQHQQPQNPSFFVPLTFGQQEQQLQPQLKRHNSSGGLDPNPNGQIPKVPFMDPGNEIFLRNHQLQVLQQQQQQQLGYPPGLQFLPQQKAMSPKPKVVGLGDEMAYHNPPQQQHQQHALLDQLYKAAELVGTGNFSHAQGILARLNHQLSPVGKPLQRAAFYFKEALQLLLLLNNPVNPPPPRCPTPFDVIFKMGAYKVFSEISPLIQFVNFTCNQALLEALDDVDRIHIVDFDIGFGAQWASFMQELSLRNRGALSLKITAFASPSTHHPIELGLMRENLTQFANDIGISFEFEVVNFDSLNQNSFPLPFPRASENEAIAVNFPLWCSSNQPAMLPSLLRFIKQLSPKIVVSLDRGCDRSDLPFPQHMLQALQSYINLLESLDAINMNSDAVNKIERFLLQPRIESTVLGRLRAPERMPLWKTLFASAGFTPVTFSNFTETQAECVAKRTSVRGFHVEKRQASLVLCWQRRELISASAWRC 776
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3462541 3465032 - CmPI595203_10g011110.1 Cmu10g1111 426641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu10g1111 776 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 395 774 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Cmu10g1111 776 MobiDBLite consensus disorder prediction 31 50 - -
Cmu10g1111 776 MobiDBLite consensus disorder prediction 66 93 - -
Cmu10g1111 776 ProSiteProfiles GRAS family profile. 404 775 IPR005202 -
Cmu10g1111 776 Pfam GRAS domain family 414 775 IPR005202 -
Cmu10g1111 776 Coils Coil 27 47 - -
Cmu10g1111 776 MobiDBLite consensus disorder prediction 66 85 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu06g0299 Cmu-Chr6:3515203 Cmu10g1111 Cmu-Chr10:3462541 5.70E-137 dispersed
Cmu07g0901 Cmu-Chr7:22885616 Cmu10g1111 Cmu-Chr10:3462541 6.00E-59 dispersed
Cmu10g1111 Cmu-Chr10:3462541 Cmu11g0954 Cmu-Chr11:13186053 8.80E-40 dispersed
Cmu10g1111 Cmu-Chr10:3462541 Cmu07g0900 Cmu-Chr7:22827251 2.20E-59 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
6942 PF03514 GRAS 4.20E-93 CL0063 Cmu TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu10g1111 K27747 - csv:101218630 1334.7