Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu10g1190 ATGGGTTCTTGTCATTCGTCTCCTAAAGGGCGGCAGAACAGAGGCGGCGTTTATTCTGCCGCCGCAGCGCCAGCTGAGGCTCCGACGGCTTCTACAACAGAGTCATTTTCTTCTTCTTCTTCATTTTTGTACTCGACGACCAGTAAGCGGCGTTGGTGGAATAAGAATTCGACTAAAACTTTCGGGGTTGGGGTTTGTTCAGAGAAGGTTCATGAATTTGAGGTTCCGGGGAGGAGTTGTTCAAATGGGTCATCGAGAATTGCTTGTTTGTATACGCAGCAGGGGAAGAAAGGGGTTAATCAAGACGCCATGATTGTGCAGGAGAATTTCAGTTCAAGAAGAGATACAGTATTTTGTGGGGTATTTGATGGACATGGTCCTTTTGGACATATGGTTGCAAAAAAAGTTCGTGATACTCTCCCTCTAATCCTGTGTACACAATGGACATCTAAATCAAATCAAGATCAAAGCAACCTCTTTAAGACAAGACATTCCCGAAGTTCGAATTCTGAAGCTTCTGTTGCCCTAGATGGAGATGAAGATTCTTACAAGTCATTGGAGGCCGAAGATAATGAAAAATTCCCCAAAATGTTTCTACCACTCAAAGTATCTTTACTGAAGTCCTTCAAATTAATGGATAAAGAGTTGAAACTGCATCCCAAAATTGATTGTTTTTGCAGTGGATCGACAGCCGTGACTCTAATAAAGCAGGGTCAGAACCTTGTACTTGGAAATGTTGGTGACTCAAGAGCGGTGCTGGCTACGATAGACGAAGATAACTCTTTGATTCCAGTTCAATTAACGGTGGACTTGAAACCTGACCTTCCTGGTGAAGCTGCTAGGATCCAGCAATGCAAAGGAAGGGTCTTTGCTTTGCAGGATGAGCCCGAAGTTGCACGAGTATGGTTGCCAAATAACGATTCACCTGGTTTGGCGATGGCGAGAGCTTTTGGAGACTTTTGTCTGAAGGATTTCGGTCTTATTTCTGTTCCCGATGTTTATTATCGTCGCCTTACTGCGAGAGATCAGTTTGTAATTCTTGCCACTGATGGGGTTTGGGACGTTCTTTCGAATAAAGAAGCAATCGAAATTGTAGCATCAGCCCCTTCTCAAGAAACAGCCGCCAGAGCTCTTGTCGACTGCGCTGTTCGTGCATGGAGGCTGAAATATCCTACATCCAAGAATGACGATTGTGCTGTTGTATGTCTCTTTCTTGAGTATGAGCCTGAAGTAGAAGAAAAGATGAAAACTTGTGCAAAACCAGTGGAAGAAGTTCTGGCCATGCTGAGTGAGGACGCAAAGGACATTGAAGTTGATTCTGATGATTGTAGAACGACTGTTGTCGAGCAGTCAGGCACTCTACAAAACTCTAATGAGATTGTACCTGTCTCCGACTCAACGGATGAGAAGGTGGCAGCTGGAGGCCGAAACCCATCGAAGAGAAGCTTAGCTGAGTGCATTTCAAGTGAAGAGGAGGAATGGTCTGCATTGGAGGGTATTACCAGAGTGAATAGTTTGCTAAGCCTTCCAAGGTTCCTCTCTGGTGACAAAAGATCAGGCAGTTGGAGGAAGTGGCTATGA 1581 44.78 MGSCHSSPKGRQNRGGVYSAAAAPAEAPTASTTESFSSSSSFLYSTTSKRRWWNKNSTKTFGVGVCSEKVHEFEVPGRSCSNGSSRIACLYTQQGKKGVNQDAMIVQENFSSRRDTVFCGVFDGHGPFGHMVAKKVRDTLPLILCTQWTSKSNQDQSNLFKTRHSRSSNSEASVALDGDEDSYKSLEAEDNEKFPKMFLPLKVSLLKSFKLMDKELKLHPKIDCFCSGSTAVTLIKQGQNLVLGNVGDSRAVLATIDEDNSLIPVQLTVDLKPDLPGEAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPDVYYRRLTARDQFVILATDGVWDVLSNKEAIEIVASAPSQETAARALVDCAVRAWRLKYPTSKNDDCAVVCLFLEYEPEVEEKMKTCAKPVEEVLAMLSEDAKDIEVDSDDCRTTVVEQSGTLQNSNEIVPVSDSTDEKVAAGGRNPSKRSLAECISSEEEEWSALEGITRVNSLLSLPRFLSGDKRSGSWRKWL 526
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4637610 4646486 - CmPI595203_10g011900.1 Cmu10g1190 426720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu10g1190 526 MobiDBLite consensus disorder prediction 1 21 - -
Cmu10g1190 526 Pfam Protein phosphatase 2C 199 383 IPR001932 -
Cmu10g1190 526 FunFam probable protein phosphatase 2C 33 82 408 - -
Cmu10g1190 526 SUPERFAMILY PP2C-like 82 406 IPR036457 -
Cmu10g1190 526 CDD PP2Cc 86 405 IPR001932 -
Cmu10g1190 526 Gene3D - 77 407 IPR036457 -
Cmu10g1190 526 PANTHER PROTEIN PHOSPHATASE 79 404 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cmu10g1190 526 SMART PP2C_4 76 403 IPR001932 -
Cmu10g1190 526 ProSiteProfiles PPM-type phosphatase domain profile. 87 405 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g0119 Cmu-Chr2:1320331 Cmu10g1190 Cmu-Chr10:4637610 1.50E-100 dispersed
Cmu05g1814 Cmu-Chr5:28273839 Cmu10g1190 Cmu-Chr10:4637610 1.50E-72 dispersed
Cmu10g1190 Cmu-Chr10:4637610 Cmu11g0993 Cmu-Chr11:15672333 3.00E-132 dispersed
Cmu10g1190 Cmu-Chr10:4637610 Cmu02g1730 Cmu-Chr2:31174190 1.90E-110 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu10g1190 - - - 0.0