Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu10g1221 ATGGAGTTTTCTTATATTTCTCCATTGCTCTTGTTTTTCTTTTTGCTTCAAACATCTGCCATTTCTACCAAAAAGTCTTACATTGTTTATTTGGGATCGCACTCGTTCCGACCGAACCCTTCAAGATATGATGTCCAACGTGCAACCGAGTCCCAATATGATATATTAGGATCAGTCAAGGGAAGCAAATTGGCAGCCAAAGAATCAATTATGTATTCCTACAATAGATACATTAATGGTTTTGCTGCCGTACTTGATGAAAAAGAAGCCATGGCTCTTGCGAAGAATCCAAACGTGGTGTCGGTTTTTGAGAACAAGGAAAGAAAATTGCATACAACACGATCATGGAATTTTCTTGGGGTGGATAGTGACGCAGGAATTCCTCCAAACTCCATTTGGAAAGCTGCAAGGTTTGGAGAAGATACAATTATAGGCAACCTTGACACGGGTGCTTGGCCAGAGTCCAAGAGCTTCAATGATGCAGGCTATGGTCCTATTCCTTCAAGGTGGAAGGGAGCTTGTGAAGCTGGCGCCAACTTTCGTTGCAATAGGAAGTTGATTGGAGCAAGATATTTCTACCAAGGATTTGCAATGTCAAAAGGTCCTCTCAATGTTAGTTTCAATAGTGCAAGAGACCAAGAAGGCCATGGTTCACACACTTTGTCCACAGCCGGAGGCAACTTTGTCCCCGGAGCCAATATCTTTGGCTATGGCAATGGCACTGCAAAAGGAGGTTCCCCCAAAGCTCGTCTTGCTGCCTACAAGGTTTGCTGGCCTTCATCTAGTGGCGGCTGTTTCGATGCTGATATCCTAGCCGGTTTCGAAGCTGCCATTAGCGACGGTGTCGATGTTCTCTCCGTCTCTCTTGGTACCGCAGCTCAAGACTTTGCTTATGACGCCGTTTCGATAGGGGCATTCCATGCCGTTCAACAAGGAATTGTTGTGGTTTGCTCGGGTGGAAATGATGGCCCGGCTCCTGGAACTATAAGCAATGTTTCTCCTTGGATGTTCACTGTTGCAGCTAGTTCCATCGATCGAGACTTTGTCAGTTATGTCGCTCTCGGAAACAAGAAGCATATCAAGGGTTCAAGTCTTTCATCTAGTGGATTCCCGAGTGGTAAGTTCTACCCTTTGATACATGGTGCGCAAGCAAAAGCCGCCAATGCCAGTGATAATCTTGCACAACTTTGCTTGGAGGGATCACTTGATCCCAGAAAAGCAAAAGGAAAGATTATAGTTTGCCTTCGAGGAGAAAATGGAAGAGTGGAGAAAGGTTTCGTTGTTCTTAAAGCTGGTGGCGCCGGTATGATTTTGGTGAATGACAAGCAACACGGATCAGGCACTTTGGCCGATCCCCATATAGTTCCTGCTGTTCATATAAGCTACACCGATGGTCTTTCTATCGCTCAATATATTAACTCCACCAAGGCACCCATTGCTCACATAACCCATGTAAGGACTGAGGTAGGAATTAAACCATCACCTGTCATGGCTGACTTCTCATCAAGAGGCCCTAATTCCATCACAGAAGCCACGCTCAAGCCTGATATAACAGCGCCAGGAGTTAGTATAATCGCATCGGTCACGACAGATGTAACTGCAACAGAATTGCCGTTTGATAAGCGTCGGGTGCCTTTCAGCGTTGAATCCGGCACTTCGATGTCTTGCCCACACATCTCAGGTGTTGTTGGCCTTTTGAAGACCCTTTATCCCACATGGAGTCCAGCAGCTATCAAATCTGCCATCATGACTACAGCAAAAACAAGAGACAACACCCAGCAAACAATATTGAACAACAACAAAGTGAAGGCAACCCCATTTGATTATGGTGCAGGACATGTCCATCCCAACAATGCAATGGACCCTGGCCTCGTTTATGACACGACCATTGACGACTACTTGAACTTCTTATGTGCACGAGGCTACAATGCCCTAGCTCTCAAGAAGTTCTATAACAAACCATTTGTCTGCACCAAATCATTCGCAATCACAGATCTTAACTACCCATCAATCTCGGTCCCAGAGTTGCGAACTGGCGCCCCGGTAACGGTCAATAGAAGAGTTAAGAATGTGGGAACCCCAGGAACGTACGTAGCAAAGGTGAAGGTGTCCTCGAAGGTTTCAGTTTCGGTCGTGCCGAGTACGTTGCAGTTTAATAGTGTGGGTGAAGAGAAGGCTTTCAAGGTTGTATTTCAATACAAAGGACAAGGAAAAGGTGAAGGCCATGTGTTTGGGACATTAATATGGTCAGATGGGAAGCATTTTGTTAGAAGTCCTCTTGCGGTGAAACTGGGATGA 2298 45.65 MEFSYISPLLLFFFLLQTSAISTKKSYIVYLGSHSFRPNPSRYDVQRATESQYDILGSVKGSKLAAKESIMYSYNRYINGFAAVLDEKEAMALAKNPNVVSVFENKERKLHTTRSWNFLGVDSDAGIPPNSIWKAARFGEDTIIGNLDTGAWPESKSFNDAGYGPIPSRWKGACEAGANFRCNRKLIGARYFYQGFAMSKGPLNVSFNSARDQEGHGSHTLSTAGGNFVPGANIFGYGNGTAKGGSPKARLAAYKVCWPSSSGGCFDADILAGFEAAISDGVDVLSVSLGTAAQDFAYDAVSIGAFHAVQQGIVVVCSGGNDGPAPGTISNVSPWMFTVAASSIDRDFVSYVALGNKKHIKGSSLSSSGFPSGKFYPLIHGAQAKAANASDNLAQLCLEGSLDPRKAKGKIIVCLRGENGRVEKGFVVLKAGGAGMILVNDKQHGSGTLADPHIVPAVHISYTDGLSIAQYINSTKAPIAHITHVRTEVGIKPSPVMADFSSRGPNSITEATLKPDITAPGVSIIASVTTDVTATELPFDKRRVPFSVESGTSMSCPHISGVVGLLKTLYPTWSPAAIKSAIMTTAKTRDNTQQTILNNNKVKATPFDYGAGHVHPNNAMDPGLVYDTTIDDYLNFLCARGYNALALKKFYNKPFVCTKSFAITDLNYPSISVPELRTGAPVTVNRRVKNVGTPGTYVAKVKVSSKVSVSVVPSTLQFNSVGEEKAFKVVFQYKGQGKGEGHVFGTLIWSDGKHFVRSPLAVKLG 765
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5013084 5021013 + CmPI595203_10g012210.1 Cmu10g1221 426751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu10g1221 765 CDD Peptidases_S8_3 109 586 IPR034197 -
Cmu10g1221 765 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Cmu10g1221 765 PRINTS Subtilisin serine protease family (S8) signature 212 225 IPR015500 -
Cmu10g1221 765 PRINTS Subtilisin serine protease family (S8) signature 550 566 IPR015500 -
Cmu10g1221 765 FunFam Subtilisin-like protease SBT1.5 141 358 - -
Cmu10g1221 765 Pfam PA domain 376 468 IPR003137 -
Cmu10g1221 765 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 15 111 IPR037045 -
Cmu10g1221 765 FunFam Subtilisin-like protease SBT1.5 637 765 - -
Cmu10g1221 765 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 27 760 IPR045051 -
Cmu10g1221 765 FunFam subtilisin-like protease SBT1.5 345 489 - -
Cmu10g1221 765 ProSitePatterns Serine proteases, subtilase family, serine active site. 551 561 IPR023828 -
Cmu10g1221 765 Pfam Fibronectin type-III domain 665 762 IPR041469 -
Cmu10g1221 765 Gene3D - 637 764 - -
Cmu10g1221 765 Gene3D Peptidase S8/S53 domain 141 633 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cmu10g1221 765 Pfam Subtilase family 141 612 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cmu10g1221 765 CDD PA_subtilisin_like 351 482 - -
Cmu10g1221 765 Pfam Peptidase inhibitor I9 26 111 IPR010259 -
Cmu10g1221 765 Gene3D - 345 489 - -
Cmu10g1221 765 SUPERFAMILY Protease propeptides/inhibitors 25 108 - -
Cmu10g1221 765 SUPERFAMILY PA domain 404 475 IPR046450 -
Cmu10g1221 765 SUPERFAMILY Subtilisin-like 110 624 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cmu10g1221 765 FunFam Subtilisin-like protease SBT5.3 16 111 - -
Cmu10g1221 765 ProSiteProfiles Serine proteases, subtilase domain profile. 115 620 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu10g1221 Cmu-Chr10:5013084 Cmu10g1223 Cmu-Chr10:5041290 0.00E+00 dispersed
Cmu10g1221 Cmu-Chr10:5013084 Cmu10g1222 Cmu-Chr10:5025509 0.00E+00 tandem
Cmu05g1597 Cmu-Chr5:25643527 Cmu10g1221 Cmu-Chr10:5013084 5.80E-153 transposed
Cmu08g1009 Cmu-Chr8:22332287 Cmu10g1221 Cmu-Chr10:5013084 1.10E-150 transposed
Cmu10g1221 Cmu-Chr10:5013084 Cmu02g0310 Cmu-Chr2:2817119 4.80E-248 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu10g1221 - - - 0.0