Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu10g1222 ATGGAGTTCTCTTATATTTCTATATTGCTTTTATTTTGCTTTTTGCTTCAAACATCTGCCATTCCTACCAAAAAGTCCTACATTGTTTATTTGGGGTCGCACTCTCTGGGACCAAATCCTTCTATATTTGACGTCCAACTTGCAACCGAGTCCCAATATGATATATTAGGATTCACCCTGGGAAGCAAAGTGGCAGCCAAAGAATCAATTATCTATTCATATAATAAATACATCAATGGCTTTGCTGCCGTACTTGATGAAAAGGAAGCCATGGCACTTGCAAACAACCCGAGTGTGGTGTCGGTTTTTGAAAACCAGAAAAGACAATTGCATACAACTAGATCATGGAGTTTTCTTGGGGTAGACAGTGATGCAGGAGTTCCCCCAAACTCCATTTGGGAAGCTGCAAGGTTTGGGGAAGATACAATCATAGGGAATCTCGATACGGGTGTTTGGCCAGAGTCCAAGAGCTTTAGTGATGAAGGCTATGGCCCTGTTCCTTCAAGGTGGAATGGAGTCTGTGAAGGTGGCTTCAACTTTACTTGCAACAAGAAGTTGATTGGAGCAAGATATTTCTACAAAGGATTTGAAGCTGTAAATGGTGCTATGAGTGATAGCACCTTAAAAACTGCAAGAGACCAAGAAGGCCATGGATCCCATACATTGTCCACTGCCGGAGGCAACTTTGTCCCCGGAGCCAATGTCTTTGGCAATGCCAATGGCACTGCAAAAGGAGGTTCCCCTAAAGCTCGTGTTGCTGCCTACAAGGTATGCTGGCCTGGTGTCCAAGGCGGCGGCTGTTTTGATGCCGACATCCTAGCCGCTATCGAAGCTGCCATTAGCGATGGTGTCGATGTTCTCTCTCTCTCTCTCGGCGCACCAGCTCGAGATTTTGCTAGTGACCCCCTTTCGATAGGAACCTTCCGTGCCGTTCAACGAGGAATCGTCGTGGTTTGCTCCGGAGGAAATGACGGCCCGTCTCCTGGGACTATAACCAATGTATCTCCTTGGATGTTCACGGTTGCTGCTAGTACCATCGACCGATATTTCTTCAGTTATGTGACCCTCGGAAACAAGCAGCATTTCAAGGGTGCAAGTCTTTCATCCGGAGGATTACCGGGTGGTAAATTCTACCCTTTGATGGATGGTGTGCAAGTAAAGGCTGCCAATGCCACTGATGATCTTGCCCTACATTGTGAGGATGGATCACTTGATCCCACAAAGGCAAAAGGGAAGATAATACTTTGCCTTAGAGGAGACGGTGCAAGAATGGGTAAGGGTTTCGAGGTTCGTCGTGCCGGTGGCGTCGGTATGATTCTTGTGAATGACAAAGAAAATGGAAATGAAATTACAGCCGATCCTCACCTCCTTCCTGCTTCTCATTTGAACTATGCCGATGGACTTGCCGTCTTTCAATATCTCAACTCCACCCAATCACCGGTGGCTTTCATAACCCACGTAAAGACTGAGTTAGGAATCAAACCATCCCCCATGATGGGTGATTTCTCATCGAGAGGCCCTAATCCCATCATAGACTCAATGATCAAGCCTGATATTACAGCACCGGGTGTGAATATACTCGCAGCAGTCTCCGAATTTGCTAAGGCAACAAATTTTCCATTCGAAACACGTCAGGTGCCTTTTAACCTTGAAATTGGTACTTCTATGTCTTGTCCACACATCTCAGGTATTGCTGGCCTTCTCAAGACACTTTATCCCAAATGGAGCCCAGCAGCCATCAAATCTGCTATCATGACTACAGCCAAAACAAGAGACAACTCCAATAAGTCAATATTGGACTACAACAAAGTGAAGGCAACCCCATTTATTTATGGTGCAGGACATGTCCACCCAAACAATGCAATGGACCCTGGCCTTGTTTATGACACAACCAATGAAGATTACATGAACTTCTTATGTGCTCAGGGCTACAACTACACCATACTCAAGAAATTCTATAACAAGCCATTCGTTTGCGCCAAATCGTTTGCTATCACAGATCTCAACTACCCATCAATCTCAGTTCCGAAGTTGACCATTGGTACCACCGTGACGATCAATAGAAGAGTTAAGAATGTGGGAACCCCAGGAACGTATGTGGCACGCGTGAAGATGTCCTCGAAGGTCTCAGTTTCGGTCGAGCCGAGTACGTTGCAATTTAATAGTGTGGATGAAGAGAAGGCTTTCAAGGTTGTATTTCAATACAAAGGACAAGGAAAAGCTCAAAGTCATGTGTTTGGCACATTGATATGGTCAGATGGGAAGCATTTTGTTAGAAGTCCCATTGCAGTGGCATTGGGATGA 2304 45.44 MEFSYISILLLFCFLLQTSAIPTKKSYIVYLGSHSLGPNPSIFDVQLATESQYDILGFTLGSKVAAKESIIYSYNKYINGFAAVLDEKEAMALANNPSVVSVFENQKRQLHTTRSWSFLGVDSDAGVPPNSIWEAARFGEDTIIGNLDTGVWPESKSFSDEGYGPVPSRWNGVCEGGFNFTCNKKLIGARYFYKGFEAVNGAMSDSTLKTARDQEGHGSHTLSTAGGNFVPGANVFGNANGTAKGGSPKARVAAYKVCWPGVQGGGCFDADILAAIEAAISDGVDVLSLSLGAPARDFASDPLSIGTFRAVQRGIVVVCSGGNDGPSPGTITNVSPWMFTVAASTIDRYFFSYVTLGNKQHFKGASLSSGGLPGGKFYPLMDGVQVKAANATDDLALHCEDGSLDPTKAKGKIILCLRGDGARMGKGFEVRRAGGVGMILVNDKENGNEITADPHLLPASHLNYADGLAVFQYLNSTQSPVAFITHVKTELGIKPSPMMGDFSSRGPNPIIDSMIKPDITAPGVNILAAVSEFAKATNFPFETRQVPFNLEIGTSMSCPHISGIAGLLKTLYPKWSPAAIKSAIMTTAKTRDNSNKSILDYNKVKATPFIYGAGHVHPNNAMDPGLVYDTTNEDYMNFLCAQGYNYTILKKFYNKPFVCAKSFAITDLNYPSISVPKLTIGTTVTINRRVKNVGTPGTYVARVKMSSKVSVSVEPSTLQFNSVDEEKAFKVVFQYKGQGKAQSHVFGTLIWSDGKHFVRSPIAVALG 767
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5025509 5034747 + CmPI595203_10g012220.1 Cmu10g1222 426752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu10g1222 767 Pfam Fibronectin type-III domain 667 764 IPR041469 -
Cmu10g1222 767 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 27 762 IPR045051 -
Cmu10g1222 767 ProSiteProfiles Serine proteases, subtilase domain profile. 115 622 - -
Cmu10g1222 767 CDD PA_subtilisin_like 353 484 - -
Cmu10g1222 767 Pfam Subtilase family 139 614 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cmu10g1222 767 FunFam subtilisin-like protease SBT1.5 347 491 - -
Cmu10g1222 767 Gene3D Peptidase S8/S53 domain 141 635 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cmu10g1222 767 CDD Peptidases_S8_3 109 588 IPR034197 -
Cmu10g1222 767 SUPERFAMILY Protease propeptides/inhibitors 25 109 - -
Cmu10g1222 767 Gene3D - 639 766 - -
Cmu10g1222 767 Gene3D - 347 491 - -
Cmu10g1222 767 PRINTS Subtilisin serine protease family (S8) signature 552 568 IPR015500 -
Cmu10g1222 767 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Cmu10g1222 767 PRINTS Subtilisin serine protease family (S8) signature 213 226 IPR015500 -
Cmu10g1222 767 ProSitePatterns Serine proteases, subtilase family, serine active site. 553 563 IPR023828 -
Cmu10g1222 767 FunFam Subtilisin-like protease SBT1.5 639 766 - -
Cmu10g1222 767 Pfam PA domain 398 469 IPR003137 -
Cmu10g1222 767 FunFam Subtilisin-like protease SBT1.5 141 356 - -
Cmu10g1222 767 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 16 111 IPR037045 -
Cmu10g1222 767 FunFam Subtilisin-like protease SBT5.3 16 111 - -
Cmu10g1222 767 SUPERFAMILY Subtilisin-like 110 626 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cmu10g1222 767 Pfam Peptidase inhibitor I9 26 111 IPR010259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu08g1009 Cmu-Chr8:22332287 Cmu10g1222 Cmu-Chr10:5025509 8.80E-148 dispersed
Cmu10g1222 Cmu-Chr10:5025509 Cmu10g1225 Cmu-Chr10:5062808 3.30E-289 dispersed
Cmu10g1221 Cmu-Chr10:5013084 Cmu10g1222 Cmu-Chr10:5025509 0.00E+00 tandem
Cmu10g1222 Cmu-Chr10:5025509 Cmu10g1223 Cmu-Chr10:5041290 2.1e-312 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu10g1222 - - - 0.0