Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu10g1222 ATGGAGTTCTCTTATATTTCTATATTGCTTTTATTTTGCTTTTTGCTTCAAACATCTGCCATTCCTACCAAAAAGTCCTACATTGTTTATTTGGGGTCGCACTCTCTGGGACCAAATCCTTCTATATTTGACGTCCAACTTGCAACCGAGTCCCAATATGATATATTAGGATTCACCCTGGGAAGCAAAGTGGCAGCCAAAGAATCAATTATCTATTCATATAATAAATACATCAATGGCTTTGCTGCCGTACTTGATGAAAAGGAAGCCATGGCACTTGCAAACAACCCGAGTGTGGTGTCGGTTTTTGAAAACCAGAAAAGACAATTGCATACAACTAGATCATGGAGTTTTCTTGGGGTAGACAGTGATGCAGGAGTTCCCCCAAACTCCATTTGGGAAGCTGCAAGGTTTGGGGAAGATACAATCATAGGGAATCTCGATACGGGTGTTTGGCCAGAGTCCAAGAGCTTTAGTGATGAAGGCTATGGCCCTGTTCCTTCAAGGTGGAATGGAGTCTGTGAAGGTGGCTTCAACTTTACTTGCAACAAGAAGTTGATTGGAGCAAGATATTTCTACAAAGGATTTGAAGCTGTAAATGGTGCTATGAGTGATAGCACCTTAAAAACTGCAAGAGACCAAGAAGGCCATGGATCCCATACATTGTCCACTGCCGGAGGCAACTTTGTCCCCGGAGCCAATGTCTTTGGCAATGCCAATGGCACTGCAAAAGGAGGTTCCCCTAAAGCTCGTGTTGCTGCCTACAAGGTATGCTGGCCTGGTGTCCAAGGCGGCGGCTGTTTTGATGCCGACATCCTAGCCGCTATCGAAGCTGCCATTAGCGATGGTGTCGATGTTCTCTCTCTCTCTCTCGGCGCACCAGCTCGAGATTTTGCTAGTGACCCCCTTTCGATAGGAACCTTCCGTGCCGTTCAACGAGGAATCGTCGTGGTTTGCTCCGGAGGAAATGACGGCCCGTCTCCTGGGACTATAACCAATGTATCTCCTTGGATGTTCACGGTTGCTGCTAGTACCATCGACCGATATTTCTTCAGTTATGTGACCCTCGGAAACAAGCAGCATTTCAAGGGTGCAAGTCTTTCATCCGGAGGATTACCGGGTGGTAAATTCTACCCTTTGATGGATGGTGTGCAAGTAAAGGCTGCCAATGCCACTGATGATCTTGCCCTACATTGTGAGGATGGATCACTTGATCCCACAAAGGCAAAAGGGAAGATAATACTTTGCCTTAGAGGAGACGGTGCAAGAATGGGTAAGGGTTTCGAGGTTCGTCGTGCCGGTGGCGTCGGTATGATTCTTGTGAATGACAAAGAAAATGGAAATGAAATTACAGCCGATCCTCACCTCCTTCCTGCTTCTCATTTGAACTATGCCGATGGACTTGCCGTCTTTCAATATCTCAACTCCACCCAATCACCGGTGGCTTTCATAACCCACGTAAAGACTGAGTTAGGAATCAAACCATCCCCCATGATGGGTGATTTCTCATCGAGAGGCCCTAATCCCATCATAGACTCAATGATCAAGCCTGATATTACAGCACCGGGTGTGAATATACTCGCAGCAGTCTCCGAATTTGCTAAGGCAACAAATTTTCCATTCGAAACACGTCAGGTGCCTTTTAACCTTGAAATTGGTACTTCTATGTCTTGTCCACACATCTCAGGTATTGCTGGCCTTCTCAAGACACTTTATCCCAAATGGAGCCCAGCAGCCATCAAATCTGCTATCATGACTACAGCCAAAACAAGAGACAACTCCAATAAGTCAATATTGGACTACAACAAAGTGAAGGCAACCCCATTTATTTATGGTGCAGGACATGTCCACCCAAACAATGCAATGGACCCTGGCCTTGTTTATGACACAACCAATGAAGATTACATGAACTTCTTATGTGCTCAGGGCTACAACTACACCATACTCAAGAAATTCTATAACAAGCCATTCGTTTGCGCCAAATCGTTTGCTATCACAGATCTCAACTACCCATCAATCTCAGTTCCGAAGTTGACCATTGGTACCACCGTGACGATCAATAGAAGAGTTAAGAATGTGGGAACCCCAGGAACGTATGTGGCACGCGTGAAGATGTCCTCGAAGGTCTCAGTTTCGGTCGAGCCGAGTACGTTGCAATTTAATAGTGTGGATGAAGAGAAGGCTTTCAAGGTTGTATTTCAATACAAAGGACAAGGAAAAGCTCAAAGTCATGTGTTTGGCACATTGATATGGTCAGATGGGAAGCATTTTGTTAGAAGTCCCATTGCAGTGGCATTGGGATGA 2304 45.44 MEFSYISILLLFCFLLQTSAIPTKKSYIVYLGSHSLGPNPSIFDVQLATESQYDILGFTLGSKVAAKESIIYSYNKYINGFAAVLDEKEAMALANNPSVVSVFENQKRQLHTTRSWSFLGVDSDAGVPPNSIWEAARFGEDTIIGNLDTGVWPESKSFSDEGYGPVPSRWNGVCEGGFNFTCNKKLIGARYFYKGFEAVNGAMSDSTLKTARDQEGHGSHTLSTAGGNFVPGANVFGNANGTAKGGSPKARVAAYKVCWPGVQGGGCFDADILAAIEAAISDGVDVLSLSLGAPARDFASDPLSIGTFRAVQRGIVVVCSGGNDGPSPGTITNVSPWMFTVAASTIDRYFFSYVTLGNKQHFKGASLSSGGLPGGKFYPLMDGVQVKAANATDDLALHCEDGSLDPTKAKGKIILCLRGDGARMGKGFEVRRAGGVGMILVNDKENGNEITADPHLLPASHLNYADGLAVFQYLNSTQSPVAFITHVKTELGIKPSPMMGDFSSRGPNPIIDSMIKPDITAPGVNILAAVSEFAKATNFPFETRQVPFNLEIGTSMSCPHISGIAGLLKTLYPKWSPAAIKSAIMTTAKTRDNSNKSILDYNKVKATPFIYGAGHVHPNNAMDPGLVYDTTNEDYMNFLCAQGYNYTILKKFYNKPFVCAKSFAITDLNYPSISVPKLTIGTTVTINRRVKNVGTPGTYVARVKMSSKVSVSVEPSTLQFNSVDEEKAFKVVFQYKGQGKAQSHVFGTLIWSDGKHFVRSPIAVALG 767
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5025509 5034747 + CmPI595203_10g012220.1 Cmu10g1222 426752

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cmu10g1222 767 Pfam Fibronectin type-III domain 667 764 IPR041469 -
Cmu10g1222 767 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 27 762 IPR045051 -
Cmu10g1222 767 ProSiteProfiles Serine proteases, subtilase domain profile. 115 622 - -
Cmu10g1222 767 CDD PA_subtilisin_like 353 484 - -
Cmu10g1222 767 Pfam Subtilase family 139 614 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cmu10g1222 767 FunFam subtilisin-like protease SBT1.5 347 491 - -
Cmu10g1222 767 Gene3D Peptidase S8/S53 domain 141 635 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cmu10g1222 767 CDD Peptidases_S8_3 109 588 IPR034197 -
Cmu10g1222 767 SUPERFAMILY Protease propeptides/inhibitors 25 109 - -
Cmu10g1222 767 Gene3D - 639 766 - -
Cmu10g1222 767 Gene3D - 347 491 - -
Cmu10g1222 767 PRINTS Subtilisin serine protease family (S8) signature 552 568 IPR015500 -
Cmu10g1222 767 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Cmu10g1222 767 PRINTS Subtilisin serine protease family (S8) signature 213 226 IPR015500 -
Cmu10g1222 767 ProSitePatterns Serine proteases, subtilase family, serine active site. 553 563 IPR023828 -
Cmu10g1222 767 FunFam Subtilisin-like protease SBT1.5 639 766 - -
Cmu10g1222 767 Pfam PA domain 398 469 IPR003137 -
Cmu10g1222 767 FunFam Subtilisin-like protease SBT1.5 141 356 - -
Cmu10g1222 767 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 16 111 IPR037045 -
Cmu10g1222 767 FunFam Subtilisin-like protease SBT5.3 16 111 - -
Cmu10g1222 767 SUPERFAMILY Subtilisin-like 110 626 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cmu10g1222 767 Pfam Peptidase inhibitor I9 26 111 IPR010259 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu10g1222 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu08g1009 Cmu-Chr8:22332287 Cmu10g1222 Cmu-Chr10:5025509 8.80E-148 dispersed
Cmu10g1222 Cmu-Chr10:5025509 Cmu10g1225 Cmu-Chr10:5062808 3.30E-289 dispersed
Cmu10g1221 Cmu-Chr10:5013084 Cmu10g1222 Cmu-Chr10:5025509 0.00E+00 tandem
Cmu10g1222 Cmu-Chr10:5025509 Cmu10g1223 Cmu-Chr10:5041290 2.1e-312 tandem
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cmu07g0675 . 39 788 Subtilisin-like Serine Gene Family AT1G01900 56.8 2.2e-232 802.4
Cmu07g0674 . 18 777 Subtilisin-like Serine Gene Family AT1G01900 54.3 2.7e-230 795.4
Cmu07g0195 . 12 769 Subtilisin-like Serine Gene Family AT1G04110 67.0 1.3e-312 1068.9
Cmu05g1597 . 3 762 Subtilisin-like Serine Gene Family AT1G20150 53.4 1.3e-224 776.5
Cmu05g1597 . 6 505 Subtilisin-like Serine Gene Family AT1G20160 61.5 7.6e-171 597.4
Cmu08g1009 . 207 664 Subtilisin-like Serine Gene Family AT1G20160 50.3 1.2e-120 430.6
Cmu01g2491 . 9 838 Subtilisin-like Serine Gene Family AT1G30600 65.2 1.5e-311 1065.4
Cmu07g0819 . 121 840 Subtilisin-like Serine Gene Family AT1G32940 54.6 5.2e-228 787.7
Cmu07g0819 . 121 840 Subtilisin-like Serine Gene Family AT1G32950 54.2 1.7e-223 772.7
Cmu07g0819 . 97 840 Subtilisin-like Serine Gene Family AT1G32960 54.4 5.4e-231 797.7
Cmu01g0946 . 122 872 Subtilisin-like Serine Gene Family AT1G62340 58.7 1.1e-250 863.2
Cmu02g0310 . 29 769 Subtilisin-like Serine Gene Family AT2G04160 63.4 1.9e-281 965.3
Cmu10g1225 . 3 732 Subtilisin-like Serine Gene Family AT2G04160 58.5 4.4e-257 884.4
Cmu10g1221 . 20 764 Subtilisin-like Serine Gene Family AT2G04160 57.8 1.3e-248 856.3
Cmu10g1229 . 8 764 Subtilisin-like Serine Gene Family AT2G04160 55.0 6.8e-242 833.9
Cmu10g1223 . 2 706 Subtilisin-like Serine Gene Family AT2G04160 57.5 1.1e-236 816.6
Cmu10g1224 . 5 770 Subtilisin-like Serine Gene Family AT2G04160 53.0 4.0e-234 808.1
Cmu10g1222 . 26 766 Subtilisin-like Serine Gene Family AT2G04160 53.9 2.0e-230 795.8
Cmu01g1107 . 5 770 Subtilisin-like Serine Gene Family AT2G04160 53.2 3.5e-230 795.0
Cmu10g1228 . 18 293 Subtilisin-like Serine Gene Family AT2G04160 54.7 3.2e-82 303.5
Cmu01g1104 . 8 145 Subtilisin-like Serine Gene Family AT2G04160 53.6 3.4e-36 150.6
Cmu03g2104 . 25 764 Subtilisin-like Serine Gene Family AT2G05920 73.5 0.0e+00 1100.5
Cmu01g1683 . 22 761 Subtilisin-like Serine Gene Family AT2G05920 55.6 3.6e-232 801.6
Cmu08g1575 . 4 729 Subtilisin-like Serine Gene Family AT2G05920 55.7 5.1e-218 754.6
Cmu09g0103 . 30 760 Subtilisin-like Serine Gene Family AT2G05920 53.7 1.8e-215 746.1
Cmu05g0855 . 27 772 Subtilisin-like Serine Gene Family AT2G05920 51.9 3.1e-215 745.3
Cmu02g1186 . 31 764 Subtilisin-like Serine Gene Family AT2G05920 51.5 1.8e-207 719.5
Cmu09g0128 . 28 781 Subtilisin-like Serine Gene Family AT2G05920 51.3 3.9e-202 701.8
Cmu11g1195 . 34 835 Subtilisin-like Serine Gene Family AT2G19170 81.9 0.0e+00 1340.1
Cmu09g0103 . 8 767 Subtilisin-like Serine Gene Family AT3G14067 64.0 7.9e-283 969.9
Cmu01g1683 . 9 761 Subtilisin-like Serine Gene Family AT3G14067 54.1 5.8e-225 777.7
Cmu03g2104 . 24 762 Subtilisin-like Serine Gene Family AT3G14067 54.1 8.6e-221 763.8
Cmu08g1575 . 1 729 Subtilisin-like Serine Gene Family AT3G14067 51.7 4.6e-206 714.9
Cmu09g0128 . 9 787 Subtilisin-like Serine Gene Family AT3G14067 50.3 4.3e-204 708.4
Cmu09g0128 . 31 789 Subtilisin-like Serine Gene Family AT3G14240 77.0 0.0e+00 1207.2
Cmu02g1186 . 32 772 Subtilisin-like Serine Gene Family AT3G14240 58.8 7.7e-246 847.0
Cmu01g1683 . 27 757 Subtilisin-like Serine Gene Family AT3G14240 52.5 7.5e-217 750.7
Cmu09g0103 . 29 758 Subtilisin-like Serine Gene Family AT3G14240 51.8 5.1e-213 738.0
Cmu05g0855 . 28 768 Subtilisin-like Serine Gene Family AT3G14240 50.1 1.1e-210 730.3
Cmu03g2104 . 28 758 Subtilisin-like Serine Gene Family AT3G14240 51.1 6.8e-210 727.6
Cmu08g1575 . 1 728 Subtilisin-like Serine Gene Family AT3G14240 50.2 1.2e-198 690.3
Cmu10g1228 . 50 293 Subtilisin-like Serine Gene Family AT3G14240 50.6 2.1e-62 237.7
Cmu07g0406 . 15 308 Subtilisin-like Serine Gene Family AT3G46840 52.3 3.5e-78 290.0
Cmu07g0406 . 15 308 Subtilisin-like Serine Gene Family AT3G46850 50.2 9.4e-76 282.0
Cmu07g0679 . 12 570 Subtilisin-like Serine Gene Family AT4G00230 61.2 6.0e-198 687.6
Cmu07g0676 . 9 568 Subtilisin-like Serine Gene Family AT4G00230 58.4 5.7e-188 654.4
Cmu07g0819 . 121 838 Subtilisin-like Serine Gene Family AT4G10510 53.2 1.9e-222 769.2
Cmu07g0819 . 98 838 Subtilisin-like Serine Gene Family AT4G10520 54.9 2.0e-230 795.8
Cmu07g0819 . 98 838 Subtilisin-like Serine Gene Family AT4G10530 52.6 8.6e-218 753.8
Cmu07g0819 . 76 840 Subtilisin-like Serine Gene Family AT4G10540 53.5 4.7e-235 811.2
Cmu07g0819 . 121 840 Subtilisin-like Serine Gene Family AT4G10550 53.4 2.5e-222 768.8
Cmu07g0406 . 3 305 Subtilisin-like Serine Gene Family AT4G15040 50.8 1.2e-75 281.6
Cmu01g2491 . 12 838 Subtilisin-like Serine Gene Family AT4G20430 68.2 0.0e+00 1138.3
Cmu07g0819 . 93 837 Subtilisin-like Serine Gene Family AT4G21650 50.4 5.0e-205 711.4
Cmu01g1207 . 63 792 Subtilisin-like Serine Gene Family AT4G26330 55.7 9.9e-235 810.1
Cmu11g1195 . 29 835 Subtilisin-like Serine Gene Family AT4G30020 81.6 0.0e+00 1335.9
Cmu02g1186 . 15 772 Subtilisin-like Serine Gene Family AT4G34980 74.5 0.0e+00 1151.7
Cmu09g0128 . 16 789 Subtilisin-like Serine Gene Family AT4G34980 53.1 5.9e-230 794.3
Cmu01g1683 . 1 757 Subtilisin-like Serine Gene Family AT4G34980 51.2 8.0e-211 730.7
Cmu05g0855 . 9 771 Subtilisin-like Serine Gene Family AT4G34980 50.8 1.8e-210 729.6
Cmu03g2104 . 24 758 Subtilisin-like Serine Gene Family AT4G34980 50.8 2.4e-207 719.2
Cmu10g1228 . 50 293 Subtilisin-like Serine Gene Family AT4G34980 51.8 5.6e-63 239.6
Cmu04g1030 . 4 564 Subtilisin-like Serine Gene Family AT5G03620 58.5 4.3e-185 644.8
Cmu07g0676 . 5 566 Subtilisin-like Serine Gene Family AT5G03620 51.5 1.8e-146 516.5
Cmu07g0679 . 8 568 Subtilisin-like Serine Gene Family AT5G03620 50.8 2.3e-146 516.2
Cmu07g0411 . 4 532 Subtilisin-like Serine Gene Family AT5G03620 51.6 6.3e-144 508.1
Cmu07g0406 . 15 306 Subtilisin-like Serine Gene Family AT5G03620 53.7 1.5e-84 310.8
Cmu06g0889 . 330 1089 Subtilisin-like Serine Gene Family AT5G19660 79.8 0.0e+00 1271.1
Cmu01g2491 . 34 612 Subtilisin-like Serine Gene Family AT5G44530 70.8 7.6e-244 840.1
Cmu01g2355 . 77 781 Subtilisin-like Serine Gene Family AT5G45640 52.9 6.7e-202 701.0
Cmu01g2355 . 23 781 Subtilisin-like Serine Gene Family AT5G45650 58.1 1.1e-250 863.2
Cmu05g0855 . 27 770 Subtilisin-like Serine Gene Family AT5G51750 73.8 0.0e+00 1156.7
Cmu01g1683 . 13 761 Subtilisin-like Serine Gene Family AT5G51750 52.0 7.8e-230 793.9
Cmu03g2104 . 23 762 Subtilisin-like Serine Gene Family AT5G51750 51.4 4.3e-220 761.5
Cmu08g1575 . 1 729 Subtilisin-like Serine Gene Family AT5G51750 52.3 1.2e-217 753.4
Cmu07g0406 . 15 332 Subtilisin-like Serine Gene Family AT5G58820 50.3 4.3e-78 289.7
Cmu07g0406 . 3 309 Subtilisin-like Serine Gene Family AT5G58840 51.8 4.5e-83 305.8
Cmu07g0406 . 15 312 Subtilisin-like Serine Gene Family AT5G59090 50.3 6.5e-77 285.8
Cmu07g0406 . 1 308 Subtilisin-like Serine Gene Family AT5G59120 50.8 3.9e-82 303.1
Cmu07g0406 . 1 308 Subtilisin-like Serine Gene Family AT5G59130 50.8 4.1e-79 293.1
Cmu05g2240 . 37 734 Subtilisin-like Serine Gene Family AT5G59190 50.2 1.3e-188 656.8
Cmu07g0406 . 1 308 Subtilisin-like Serine Gene Family AT5G59190 51.3 4.1e-81 299.7
Cmu10g1225 . 734 1476 Subtilisin-like Serine Gene Family AT5G59810 61.7 1.3e-261 899.4
Cmu01g1107 . 13 771 Subtilisin-like Serine Gene Family AT5G59810 59.4 9.5e-260 893.3
Cmu02g0310 . 6 769 Subtilisin-like Serine Gene Family AT5G59810 58.3 3.6e-259 891.3
Cmu10g1229 . 5 764 Subtilisin-like Serine Gene Family AT5G59810 54.6 3.6e-235 811.6
Cmu10g1221 . 1 764 Subtilisin-like Serine Gene Family AT5G59810 55.3 3.1e-234 808.5
Cmu10g1222 . 1 766 Subtilisin-like Serine Gene Family AT5G59810 55.0 4.0e-234 808.1
Cmu10g1223 . 1 706 Subtilisin-like Serine Gene Family AT5G59810 55.9 6.8e-226 780.8
Cmu10g1224 . 1 772 Subtilisin-like Serine Gene Family AT5G59810 53.5 3.4e-225 778.5
Cmu10g1228 . 18 293 Subtilisin-like Serine Gene Family AT5G59810 56.5 3.2e-82 303.5
Cmu01g1104 . 8 131 Subtilisin-like Serine Gene Family AT5G59810 60.5 3.3e-39 160.6
Cmu01g1683 . 8 762 Subtilisin-like Serine Gene Family AT5G67360 72.1 0.0e+00 1102.4
Cmu08g1575 . 1 730 Subtilisin-like Serine Gene Family AT5G67360 66.1 9.8e-286 979.5
Cmu03g2104 . 28 763 Subtilisin-like Serine Gene Family AT5G67360 56.3 2.8e-232 802.0
Cmu09g0103 . 8 759 Subtilisin-like Serine Gene Family AT5G67360 56.2 4.5e-230 794.7
Cmu05g0855 . 11 769 Subtilisin-like Serine Gene Family AT5G67360 53.6 9.3e-228 786.9
Cmu09g0128 . 9 784 Subtilisin-like Serine Gene Family AT5G67360 51.6 1.3e-210 729.9
Cmu02g1186 . 13 767 Subtilisin-like Serine Gene Family AT5G67360 51.4 8.7e-210 727.2
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000094 2 9 4 4 4 9 0 9 9 7 6 10 16 7 9 22 9 5 21 9 7 5 6 12 12 10 2 10 10 2 247