Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu10g1223 ATGGGAAGCAAATTGGCAGCCAAACGATCAATTATCTACTCGTATAATAGATACATTAATGGCTTTGCTGCCGTACTCGACGAAAAGGAAGCCACAGCTATTGCAAAGGATCCAAGTGTGGTGTCGGTTTTTGAAAACGAGGAAAGAGATTTGCATACAACAAGATCATGGAATTTTCTTGGAGTGGAGAGTGATGAAGAAATAATTCCTCCAAACTCCATTTGGAAAGCTGCAAGGTTTGGGGAAGATACAATTATAGGCAACCTTGACACAGGTGTTTGGCCAGAGTCCAAGAGCTTCAATGATGCAGGCTATGGCCCTGTTCCTTCAAGGTGGAGAGGAGCTTGTGAAGGTGGAGCCAACTTCAGTTGTAATAGGAAATTGATTGGAGCACGATATTTCTATCAAGGAGTTGTAAGTGCAAAGGGGCTTCTCAACAATACCTTCAACACTGCACGAGACCGTGGAGGCCATGGATCCCACACTCTGTCCACAGCCGGCGGCAACTTTGTTCCCGGAGCCAATATCTTTGGCTATGGCAATGGCACTGCAAAAGGAGGTTCCCCCAAAGCTCGTCTTGCTGCCTACAAGGTTTGCTGGCCTGCCCCTAATGGCGGCTGTTTCGATGCTGATATCCTAGCCGCTTTCGAAGCTGCCATTAGCGACGGTGTCGATGTTCTCTCCGTCTCTCTTGGTGGAAGAGCTCAAGAGTTTTCTCGTGACCCCATTTCGATAGGGGCCTTCCATGCTGTCCAACAAGGAATTGTTGTGGTTTGCTCGGGAGGAAATAAAGGTCCGACTCCTCAGACTGTAAGCAATATTTCCCCCTGGAAATTCACTGTCGCAGCTAGTTATTCCGACCGAAGCTTCACCAATTATGTAGTCCTCGAAAACAAGAAGCATTTTAAGGGTCCAAGTCTTTCATCTGGAGAATTGCCAGAGGGTAAGTTCTACCCATTGATGAATGCTGTTGAAGCAAAAGCTGCAAATGCCTCTGATAACCTTGCCCAAATTTGCGAGTACGGATCACTTGATCCTACAAAGGCAAAAGGGAAGATTATAGTTTGTCATCTAGGAGACAATTCAAGAATTGATAAGGGTTTCGAGGTTGTTCGTGTTGGTGGTGTTGGTATGATTATTGTAAATGACAAGAAAGATGGAAGTAACCTTAATATCGATCTCCACATACTTCCTGCTTCTCATTTAAACTATGAAGATGGACTTTCAATTGCTCAATATATGAATTCCACCAAAACACCCATGGCTTTCATAACACATGTAAAAACTGAGTTGGGAATTAAACCATCACCTGTCATGGCTGGATTCTCATCAAAAGGCCCTAATCCCATCACAGACTCCATGATCAAGCCTGATATAACAGCACCGGGAGCAAGTATAATTGCATCGTCCACAGAAGATGTAATGGCAACAAAATCTCAATTCGATACCCGTCGAGTGCCTTTTAATGTTCAATCTGGAACTTCTATGGCTTGCCCACACATCTCGGGTGTTGTTGGCCTTCTCAAGACCCTTTACCCTACATGGAGTCCTGCAGCTATCAAATCTGCTATCATGACTACAGCAAATACAAGAGACAACACCATGCATCCAATATTGGACTCTGACAACTTAGAGGGAACCCCATTTGATTATGGTGCAGGACATGTTAATCCTAACAATGCAATAGACCCCGGTCTCGTTTACGATACAACCATTGATGACTACTTGAACTTCTTATGTGCTTGGGGCTACAACTACACCCAACTCAAGAAATTCTCTAACAAGCCATTTGTTTGCGCCGAATCATTCGCAATCACAGATCTCAACTACCCATCGATCTCAGTTCCGAAGTTGACAATCGATGCCCCAGTGACGATCAATAGAAGAGTTAAAAATGTGGGAAGTCCAGGATCGTATGTGGCGCAAGTGAAGGTGCCTGAGGGAGTTGCGGCTACGGTCGAGCCGAATACGTTGCAATTTAACAATGTGGGTGAAGAGAAGGCTTTCAAGGTTGTATTTCGATACATAGGACAAGGACAACGTCAAGGCTATGTGTTTGGGACATTAGTATGGTCAGATGGGAAGCATTTTGTTAGAAGTCCTATTGCAATGAAATTGGGATGA 2124 44.54 MGSKLAAKRSIIYSYNRYINGFAAVLDEKEATAIAKDPSVVSVFENEERDLHTTRSWNFLGVESDEEIIPPNSIWKAARFGEDTIIGNLDTGVWPESKSFNDAGYGPVPSRWRGACEGGANFSCNRKLIGARYFYQGVVSAKGLLNNTFNTARDRGGHGSHTLSTAGGNFVPGANIFGYGNGTAKGGSPKARLAAYKVCWPAPNGGCFDADILAAFEAAISDGVDVLSVSLGGRAQEFSRDPISIGAFHAVQQGIVVVCSGGNKGPTPQTVSNISPWKFTVAASYSDRSFTNYVVLENKKHFKGPSLSSGELPEGKFYPLMNAVEAKAANASDNLAQICEYGSLDPTKAKGKIIVCHLGDNSRIDKGFEVVRVGGVGMIIVNDKKDGSNLNIDLHILPASHLNYEDGLSIAQYMNSTKTPMAFITHVKTELGIKPSPVMAGFSSKGPNPITDSMIKPDITAPGASIIASSTEDVMATKSQFDTRRVPFNVQSGTSMACPHISGVVGLLKTLYPTWSPAAIKSAIMTTANTRDNTMHPILDSDNLEGTPFDYGAGHVNPNNAIDPGLVYDTTIDDYLNFLCAWGYNYTQLKKFSNKPFVCAESFAITDLNYPSISVPKLTIDAPVTINRRVKNVGSPGSYVAQVKVPEGVAATVEPNTLQFNNVGEEKAFKVVFRYIGQGQRQGYVFGTLVWSDGKHFVRSPIAMKLG 707
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
10 5041290 5049646 + CmPI595203_10g012230.1 Cmu10g1223 426753
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmu10g1223 707 CDD PA_subtilisin_like 293 424 - -
Cmu10g1223 707 SUPERFAMILY Subtilisin-like 51 566 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cmu10g1223 707 Gene3D - 579 706 - -
Cmu10g1223 707 CDD Peptidases_S8_3 51 529 IPR034197 -
Cmu10g1223 707 ProSitePatterns Serine proteases, subtilase family, serine active site. 493 503 IPR023828 -
Cmu10g1223 707 Pfam Fibronectin type-III domain 607 703 IPR041469 -
Cmu10g1223 707 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 8 702 IPR045051 -
Cmu10g1223 707 FunFam subtilisin-like protease SBT1.5 287 431 - -
Cmu10g1223 707 Pfam PA domain 331 410 IPR003137 -
Cmu10g1223 707 SUPERFAMILY PA domain 330 427 IPR046450 -
Cmu10g1223 707 FunFam Subtilisin-like protease SBT1.5 579 707 - -
Cmu10g1223 707 ProSiteProfiles Serine proteases, subtilase domain profile. 56 562 - -
Cmu10g1223 707 FunFam Subtilisin-like protease SBT1.5 83 312 - -
Cmu10g1223 707 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 52 IPR037045 -
Cmu10g1223 707 Gene3D - 287 431 - -
Cmu10g1223 707 PRINTS Subtilisin serine protease family (S8) signature 492 508 IPR015500 -
Cmu10g1223 707 PRINTS Subtilisin serine protease family (S8) signature 81 100 IPR015500 -
Cmu10g1223 707 PRINTS Subtilisin serine protease family (S8) signature 154 167 IPR015500 -
Cmu10g1223 707 Pfam Subtilase family 81 537 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cmu10g1223 707 Pfam Peptidase inhibitor I9 7 52 IPR010259 -
Cmu10g1223 707 Gene3D Peptidase S8/S53 domain 83 575 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu10g1221 Cmu-Chr10:5013084 Cmu10g1223 Cmu-Chr10:5041290 0.00E+00 dispersed
Cmu10g1223 Cmu-Chr10:5041290 Cmu10g1225 Cmu-Chr10:5062808 6.80E-273 dispersed
Cmu10g1222 Cmu-Chr10:5025509 Cmu10g1223 Cmu-Chr10:5041290 2.1e-312 tandem
Cmu10g1223 Cmu-Chr10:5041290 Cmu10g1224 Cmu-Chr10:5054546 4.30E-259 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu10g1223 - - - 0.0