Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu10g1225 ATGCCCTCTTACATTGTTTACTTGGGATCACATTCGCACGGGCTGAATCCTTCTGCAGTCGATCTCCAAATCGCAACGGAATCTCACTACAGTTTACTTGGGTCATTGTTAGGAAGCAATGAGGCAGCCAAGGAAGCAATTTTCTATTCCTACAATAGACATATCAATGGCTTTGCAGCCATGCTTGACCAAAAAGTTGCAGAAGATTTAGCAAGAAATCCTGCTGTGGCATCAGTCCATGAGAACAAGGGAAGAAAACTACACACAACAAGTTCATGGAAATTTCTTGGAGTAGAACATGATGATGGAATTCCTACAAACTCTATTTGGAATCTTGCAAGTTTTGGTGAATCTACAATCATTGCCAACCTTGACACAGGCGTTTGGCCAGAATCAAAGAGCTTCAGTGATGAAGGATATGGACCTGTTCCCACAAGGTGGAGGGGAAGTTGTGAAGGTGGCTCCAAATTTCATTGCAACAGGAAACTGATTGGAGCAAGGTATTTCAACAAAGGGTACGCAGCTTATGTGGGATCCCTCAATGCAAGCTATGAAACAGCAAGAGACCATGAAGGGCATGGAACACACACATTATCTACTGCTGGAGGCAATTTCATTTCAGGGGCTAATGTATTTGGGAATGGTAATGGCACCGCAAAAGGAGGGTCCCCTAAAGCCCTTGTTGCTGCCTATAAAGTATGCTGGCCTCAAGTGGATTCTGGTGGTGCTTGTTTTGATGCTGACATTTTAGCAGCCATTGAAGCTGCTATTAGTGATGGAGTTGATGTTCTCTCACTTTCACTTGGTGGAGATTCCAAAGATTTTTCAGACGACGTTACGGCTATCGGGGCCTTCCATGCCGTTCAACAAGGTATCGTCATTGTTTGCTCTGCTGGAAACTCTGGACCAGCTCCAGGGACAGTAGAAAATGTGGCACCCTGGCTCTTAACTGTGGGTGCTAGCACAATCAACAGACAGTTTACTAGTTATGTGGCCCTTGGAAACAAGAAGCATATCAAGGGTGCAAGTCTTTCTGATAAAATATTGCCAGCTCAGAAATTCTATCCATTGATCAGTGCTGCAGATGCAAAAGCCAACAATGTCTCGTTTGACAATGCCCAACTGTGTGAGGAAGGGTCACTTGATCCCAAAAAGGTAAAAGGGAAGATTATAATTTGCCTTAGAGGGGAAAATGCAAGAGTGGACAAAGGTTATGTGGCAGCTCAAGCAGGTGCTGTTGGAATGATTCTTGCTAACACTGAGCAAAATGGGAATGAACTTATAGCTGATGCACACCTACTTCCTGTTTCCCATGTAAGCTATACTGATGGCCAATCAATCTACCAATACATCAATTCCACCAAGATTCCAATGGCTTACATGACTCATGTAAGAACAGAGATGGGAATCAAACCAGCACCAGTTATGGCTTCATTCTCATCAAGAGGTCCCAATACAATTGAAGAGTCAATACTCAAGCCTGATATAACAGCACCTGGTGTCAATATACTAGCAGCCTACTCTGAAGATGCATCGCAGAGTGGTTCATCGTTTGATAATCGTCGAATTCCGTTTAATATAGTATCTGGAACTTCCATGTCATGCCCCCACATTTCTGGTATTGTTGGCCTTCTCAAGACCCTTTATCCCAAGTGGAGTCCAGCAGCTATCAAATCTGCAATCATGACCACAGCTGAAACCAGAGCCAATGACTTACATCCAATACTAAATACAGGAAAGCTTAAAGGCAACCCATTTGCATATGGTGCAGGACATGTCCATCCCAACAGGGCAATGAACCCTGGGCTTGTTTATGACCTTACCACCAAGGACTACTTGAATTTCTTGTGTGCTCAAGGCTACAACAAAACACAAATCAGTAAATTCTCGAATACGTCGTTTGTTTGTTCGAAGTCGTTCAAACTAACAGATTTCAACTACCCATCAATCTCCATACCCAACATGAAATCAGGCCCTGTGACAATCAAAAGAAGAGTTAAGAATGTGGGAAGGCCAAGCACTTATGTTGCTCGAGTGAAGGTACCCCCAGGAGTATCAGTTTCAGTTGAGCCAAGTACATTGAAGTTTAGTGGAATTGATGAAGAGAAGAGTTTCAAAGTTGTAGTGGGGAGTGTTGCAAACAACAAGCATAAAGGATATGTATTTGGGTCTTTAGCATGGGAAGATGGGAAGCATCATTCTTATATTGTTTATTTGGGATCACATTCACATGGGTTGAATCCTTCTTCAATTGATATCCAACTTGCAACAGAATCTCACTATAATTTACTTGGATCCTTGATAGGAAGCAATGAAGCAGCTAAGGAAGCAATTTTCTACTCATACAATAGACATATCAATGGCTTTGCAGCTGTGCTAGATCAGAAAGTTGCAGGAGATCTAGCAAAACATCCTGATGTGGTATCAGTACATGAAAACAAAGGAAGAAAACTGCACACAACACATTCATGGAACTTTCTTGGAGTTGAGAATGATGGTGCAATTCCTTCAAACTCTGTTTGGAATCTTGCAAGTTTTGGTGAATCTACAATCATTGGCAACCTTGACACAGGTGTTTGGCCAGAATCAAAGAGTTTCAATGATGAAGGATATGGACCTATCCCAACAAGGTGGAAGGGAAGTTGTGAAGGTGGCTCCAAATTTCATTGCAACAGGAAGCTGATTGGAGCAAAGTATTTCAACAAAGGGTATGCAGCCATTGTGGGACCTCTAAACTCAAGCTATGAAACAGCAAGAGACCATGAAGGGCATGGAACCCACACATTATCCACAGCAGGAGGCCATTTTGTTGAAGGAGCTAATATATTTGGGTATGGTAATGGCACTGCAAAAGGAGGGTCTCCTAAAGCTCTTGTTGCTGCCTATAAAGTTTGTTGGCCTCAAGTGCTTTTGCTTGGTGAGTGTTTTGAGGCAGACATTCTAGCTGGCTTTGAAGCTGCCATTAGTGATGGAGTTGATGTTCTTTCTGTTTCACTTGGTGGAGGTCCTCAAGATTTTGCTCATGATTCAATAGCTATAGGAGCTTTTCATGCAGTTCAGAATGGTATTACTGTTGTTTGTTCTGCTGGAAACTCTGGACCAACTCCTGGCTCTGTTTCTAATGTTGCACCATGGATTATAACTGTGGGAGCTAGCACGGTTGACAGGCTTTTTACGAATTACGTCGCGCTTGGAGACAAAAGGCACATCAAGGGTGCAAGTCTTTCTGATAAAATATTGCCAGCTCAGAAATTCTATCCATTGATCAGTGCTGTAGATGCAAAAGCCAACAATGTCTCGAACGATGACGCGGTACTATGTGAAGAAGGGTCTCTTGATCCTAAAAAGGTAAAAGGGAAGATTGTGGTTTGCCTTAGAGGGGACAATGCAAGAGTGGACAAAGGTTATGTGGCTGCTGAAGCAGGTGCTGTTGGAATGATTCTTGCTAATGACAAGGAAAATGGGGATGAAATTTTAGCTGATGCCCATCTCCTTCCTGCTTCCCATATAACCTATTCTGATGGTCAATTACTCTACCAATACATCAAATCTACCAAAACTCCAATGGCTTATATGACTCACGTGAGGACAGAGTTGGGAGTCAAACCAGCACCGATTATGGCTTCATTCTCCTCGAGAGGTCCCAACACAATGGATCCCTCAATACTCAAGCCTGATATAACAGCACCAGGAGTGAATATATTAGCAGCTTATTGTGAAGATACATCACCAACAGGTTCAAGTTTTGATGAACGTCGAGTGGCATTTAATGTAGAATCTGGGACTTCTATGTCATGCCCCCATATTGCTGGGATCGTTGGCCTTCTCAAAACACTTTATCCTAAGTGGAGTCCAGCAGCTATTAGATCTGCAATCATGACCACAGCTGGAACTCAAGCCAATGACTTGAATCCAATATTGAGCACAAAGCAAGTGAAAGCAAACGCATTGGCATATGGTGCTGGCCACGTTCGTCCAAACAAAGCAGCAAATCCCGGCCTTGTTTATGACCTTTCCACCAAAGATTACTTGAACTACTTATGTGCTCGAGGCTACAACAAAACACAAATCAAGCAATTCTCCAATCACACTTCATTTGTTTGTTCAAAATCATTCAAAATCACAGATTTGAACTACCCGTCCATCTCGATACTGGAACTGAAATCGGAGGCTGTCGTGAAGATTAAAAGGCGAGTGAAGAATGTGGGAAGTCCAGGCACGTATGTTGTTCAAGTCGACGCGCCACTGGGGGTTTCGGTTTCGGTTGAGCCAACTAGTTTGAAGTTTACTGGAGTTGATGAAGAGAAAAATTTTAGAGTTGTGTTGAAGAGTAGTGTGCCTAATGATTTTCGTGGAAAGTATGTGTTTGGGAGACTTGAATGGTCTGATGGGAACCATCATGTTAGAAGTCCGATTGTAGTGAGATTAGGTGGATGA 4437 42.84 MPSYIVYLGSHSHGLNPSAVDLQIATESHYSLLGSLLGSNEAAKEAIFYSYNRHINGFAAMLDQKVAEDLARNPAVASVHENKGRKLHTTSSWKFLGVEHDDGIPTNSIWNLASFGESTIIANLDTGVWPESKSFSDEGYGPVPTRWRGSCEGGSKFHCNRKLIGARYFNKGYAAYVGSLNASYETARDHEGHGTHTLSTAGGNFISGANVFGNGNGTAKGGSPKALVAAYKVCWPQVDSGGACFDADILAAIEAAISDGVDVLSLSLGGDSKDFSDDVTAIGAFHAVQQGIVIVCSAGNSGPAPGTVENVAPWLLTVGASTINRQFTSYVALGNKKHIKGASLSDKILPAQKFYPLISAADAKANNVSFDNAQLCEEGSLDPKKVKGKIIICLRGENARVDKGYVAAQAGAVGMILANTEQNGNELIADAHLLPVSHVSYTDGQSIYQYINSTKIPMAYMTHVRTEMGIKPAPVMASFSSRGPNTIEESILKPDITAPGVNILAAYSEDASQSGSSFDNRRIPFNIVSGTSMSCPHISGIVGLLKTLYPKWSPAAIKSAIMTTAETRANDLHPILNTGKLKGNPFAYGAGHVHPNRAMNPGLVYDLTTKDYLNFLCAQGYNKTQISKFSNTSFVCSKSFKLTDFNYPSISIPNMKSGPVTIKRRVKNVGRPSTYVARVKVPPGVSVSVEPSTLKFSGIDEEKSFKVVVGSVANNKHKGYVFGSLAWEDGKHHSYIVYLGSHSHGLNPSSIDIQLATESHYNLLGSLIGSNEAAKEAIFYSYNRHINGFAAVLDQKVAGDLAKHPDVVSVHENKGRKLHTTHSWNFLGVENDGAIPSNSVWNLASFGESTIIGNLDTGVWPESKSFNDEGYGPIPTRWKGSCEGGSKFHCNRKLIGAKYFNKGYAAIVGPLNSSYETARDHEGHGTHTLSTAGGHFVEGANIFGYGNGTAKGGSPKALVAAYKVCWPQVLLLGECFEADILAGFEAAISDGVDVLSVSLGGGPQDFAHDSIAIGAFHAVQNGITVVCSAGNSGPTPGSVSNVAPWIITVGASTVDRLFTNYVALGDKRHIKGASLSDKILPAQKFYPLISAVDAKANNVSNDDAVLCEEGSLDPKKVKGKIVVCLRGDNARVDKGYVAAEAGAVGMILANDKENGDEILADAHLLPASHITYSDGQLLYQYIKSTKTPMAYMTHVRTELGVKPAPIMASFSSRGPNTMDPSILKPDITAPGVNILAAYCEDTSPTGSSFDERRVAFNVESGTSMSCPHIAGIVGLLKTLYPKWSPAAIRSAIMTTAGTQANDLNPILSTKQVKANALAYGAGHVRPNKAANPGLVYDLSTKDYLNYLCARGYNKTQIKQFSNHTSFVCSKSFKITDLNYPSISILELKSEAVVKIKRRVKNVGSPGTYVVQVDAPLGVSVSVEPTSLKFTGVDEEKNFRVVLKSSVPNDFRGKYVFGRLEWSDGNHHVRSPIVVRLGG 1478
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5062808 5082876 + CmPI595203_10g012250.1 Cmu10g1225 426755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu10g1225 1478 CDD PA_subtilisin_like 330 459 - -
Cmu10g1225 1478 Gene3D Peptidase S8/S53 domain 119 612 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cmu10g1225 1478 Pfam Fibronectin type-III domain 644 733 IPR041469 -
Cmu10g1225 1478 Pfam Fibronectin type-III domain 1376 1474 IPR041469 -
Cmu10g1225 1478 FunFam Subtilisin-like protease SBT1.5 118 343 - -
Cmu10g1225 1478 FunFam Subtilisin-like protease SBT5.3 724 819 - -
Cmu10g1225 1478 SUPERFAMILY Subtilisin-like 818 1334 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cmu10g1225 1478 SUPERFAMILY PA domain 383 461 IPR046450 -
Cmu10g1225 1478 CDD Peptidases_S8_3 817 1296 IPR034197 -
Cmu10g1225 1478 ProSitePatterns Serine proteases, subtilase family, serine active site. 530 540 IPR023828 -
Cmu10g1225 1478 Gene3D - 1347 1476 - -
Cmu10g1225 1478 Gene3D - 616 739 - -
Cmu10g1225 1478 ProSiteProfiles Serine proteases, subtilase domain profile. 823 1330 - -
Cmu10g1225 1478 ProSitePatterns Serine proteases, subtilase family, serine active site. 1261 1271 IPR023828 -
Cmu10g1225 1478 ProSiteProfiles Serine proteases, subtilase domain profile. 92 599 - -
Cmu10g1225 1478 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 88 IPR037045 -
Cmu10g1225 1478 SUPERFAMILY Subtilisin-like 87 603 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cmu10g1225 1478 FunFam subtilisin-like protease SBT1.5 1055 1199 - -
Cmu10g1225 1478 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 4 729 IPR045051 -
Cmu10g1225 1478 Pfam Subtilase family 116 591 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cmu10g1225 1478 SUPERFAMILY PA domain 1104 1191 IPR046450 -
Cmu10g1225 1478 FunFam Subtilisin-like protease SBT1.5 849 1074 - -
Cmu10g1225 1478 PRINTS Subtilisin serine protease family (S8) signature 920 933 IPR015500 -
Cmu10g1225 1478 PRINTS Subtilisin serine protease family (S8) signature 1260 1276 IPR015500 -
Cmu10g1225 1478 PRINTS Subtilisin serine protease family (S8) signature 847 866 IPR015500 -
Cmu10g1225 1478 Pfam PA domain 372 447 IPR003137 -
Cmu10g1225 1478 Pfam PA domain 1105 1178 IPR003137 -
Cmu10g1225 1478 FunFam Subtilisin-like protease SBT5.3 1 88 - -
Cmu10g1225 1478 FunFam subtilisin-like protease SBT1.5 324 468 - -
Cmu10g1225 1478 Pfam Peptidase inhibitor I9 3 88 IPR010259 -
Cmu10g1225 1478 Pfam Peptidase inhibitor I9 734 819 IPR010259 -
Cmu10g1225 1478 Gene3D - 1055 1199 - -
Cmu10g1225 1478 Gene3D - 324 468 - -
Cmu10g1225 1478 FunFam Subtilisin-like protease SBT1.5 1347 1477 - -
Cmu10g1225 1478 CDD Peptidases_S8_3 86 565 IPR034197 -
Cmu10g1225 1478 Gene3D Peptidase S8/S53 domain 850 1343 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cmu10g1225 1478 Pfam Subtilase family 847 1308 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cmu10g1225 1478 CDD PA_subtilisin_like 1061 1190 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g1103 Cmu-Chr1:17870758 Cmu10g1225 Cmu-Chr10:5062808 4.30E-33 dispersed
Cmu01g1104 Cmu-Chr1:17871686 Cmu10g1225 Cmu-Chr10:5062808 3.10E-36 dispersed
Cmu01g2355 Cmu-Chr1:35621593 Cmu10g1225 Cmu-Chr10:5062808 2.70E-169 dispersed
Cmu02g0310 Cmu-Chr2:2817119 Cmu10g1225 Cmu-Chr10:5062808 1.80E-263 dispersed
Cmu09g0842 Cmu-Chr9:8214572 Cmu10g1225 Cmu-Chr10:5062808 1.50E-120 dispersed
Cmu10g1222 Cmu-Chr10:5025509 Cmu10g1225 Cmu-Chr10:5062808 3.30E-289 dispersed
Cmu10g1223 Cmu-Chr10:5041290 Cmu10g1225 Cmu-Chr10:5062808 6.80E-273 dispersed
Cmu10g1225 Cmu-Chr10:5062808 Cmu10g1229 Cmu-Chr10:5129889 1.20E-287 dispersed
Cmu10g1224 Cmu-Chr10:5054546 Cmu10g1225 Cmu-Chr10:5062808 4.50E-270 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu10g1225 - - - 0.0