Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu10g1228 ATGGCTGCCCTCTTCAAAACCGGTAAACTCCAACCGACATCAACGGATGCCGGTGCAAGCCTTTCTTCTAAAGCATTGCCAGTTAACAAGTTCAACCCCTTAATTAATGCCGTGGATGCGAAAGCCAACAATGTTACTAACCGTGATGCGGAAATTTGTGGTGAGGGAACGCTTGATTTCACGAAATTGAATGGGAAGATTGTGGTTTGCCTTCGAGGGGTTAACTCAAGAGTGGCCAAAGGTTATGTAGCTGCTCAGGCAGGGGCTGTTGGGATGATTCTGGTTAACGATGAGCTAAGTGGGAATGAGATTTTAGCTGATGCACACATCATTCCAGCTTCCAATGTAAACTATAATGATAGCATATCCATCTCCCAATATATCAGCTCTACAACGACACCAATGGCTTACATAAGTCCTGCGAGGACAACACTTGGAGTCAAGCCCGCCCCAACAATAATGGCTGATTTCTCAGGAAGAGGCCCTAATACAATCGAGGAGTCAATCCTCAAGCCAGATGTAACAGCACCAGGTGTGAATATAATGGCAGCTTACCCCAGTGGAATACTGTTGTCAAATATACCAGTTGATGATCGTCGAGTTCCTTTTAAGGTAGACTCTGGCACATCCATGGCCTGCCCCCATGTTTCAGGCATTGTAGGCCTTCTCAAAACCCTAAATCCAAAATGGAGTCCAGCCGCCATTAAATCTGCAATCATGACTACAGCCAAAACAAGAGACAACAACTTACATCCAATTTTAGACTCCACTGGACTCAAAGCAACTCCATTAGCATACGGCGCTGGACATGTTCATCCAAACGGTGCGATGGACCCTGGCCTCGTTTACGACATTACAATCGACGATTACCTCAATTTCTTTTACCGATTTGAAAAGGGGACCTGTGACGATCAATCGAAAGGTGAAGAATGTGGGAAGTCCAGGGAGGTAGGTTGCTCGAGTGAAGGCGCCTTTGGAAGTTTCAATTGTTGTGGAGCCAAGTATATTGGAATTTGCCGCCATGGATGA 1029 45.87 MAALFKTGKLQPTSTDAGASLSSKALPVNKFNPLINAVDAKANNVTNRDAEICGEGTLDFTKLNGKIVVCLRGVNSRVAKGYVAAQAGAVGMILVNDELSGNEILADAHIIPASNVNYNDSISISQYISSTTTPMAYISPARTTLGVKPAPTIMADFSGRGPNTIEESILKPDVTAPGVNIMAAYPSGILLSNIPVDDRRVPFKVDSGTSMACPHVSGIVGLLKTLNPKWSPAAIKSAIMTTAKTRDNNLHPILDSTGLKATPLAYGAGHVHPNGAMDPGLVYDITIDDYLNFFYRFEKGTCDDQSKGEECGKSREVGCSSEGAFGSFNCCGAKYIGICRHG 342
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5120398 5122600 + CmPI595203_10g012280.1 Cmu10g1228 426758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu10g1228 342 Pfam PA domain 51 120 IPR003137 -
Cmu10g1228 342 FunFam subtilisin-like protease SBT1.5 9 145 - -
Cmu10g1228 342 ProSitePatterns Serine proteases, subtilase family, serine active site. 208 218 IPR023828 -
Cmu10g1228 342 Pfam Subtilase family 121 248 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cmu10g1228 342 Gene3D Peptidase S8/S53 domain 146 290 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cmu10g1228 342 Gene3D - 15 145 - -
Cmu10g1228 342 SUPERFAMILY PA domain 59 102 IPR046450 -
Cmu10g1228 342 CDD PA_subtilisin_like 28 138 - -
Cmu10g1228 342 ProSiteProfiles Serine proteases, subtilase domain profile. 1 277 - -
Cmu10g1228 342 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 32 296 IPR045051 -
Cmu10g1228 342 SUPERFAMILY Subtilisin-like 115 281 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu10g1228 Cmu-Chr10:5120398 Cmu11g1195 Cmu-Chr11:23258692 2.90E-27 dispersed
Cmu10g1228 Cmu-Chr10:5120398 Cmu10g1229 Cmu-Chr10:5129889 9.00E-122 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu10g1228 - - - 0.0