Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu10g1229 ATGGATGCCTTCAATCTTTCTTCAATCCTTTTGATATCTCTTCTTCTCACTTTGTTGCAAACATCCACCATTGCCACCAAAAAGCCTTACATTGTTTATTTGGGGTCACATTCTCACGGTTCGAGTTCTTCGTCGTTAGATCATCGACGTGCAACCGTGTCTCATTATGATTTATTGGGATCAGTGTTAAGAAGCAAAAAGATAGCCAAAGAAGCTATTTTGTACTCATACAACAAGAACATCAATGGCTTTGCTGCCATGCTTGATGAAAAGCAAGCAGCAGATGTTGCAAAATTTCCGAATGTTGTTTCGGTTTTCGAAAGTCAAGCAAAAAAATTACATACAACACAATCATGGCACTTCCTTGGAATAGAAAAACATGAAGAAATTCCTCTCAACTCCATTTGGAATGCTGCAAAATTTGGTGATGATATAATCATAGCTAACTTTGACACAGGTGTTTGGCCAGAATCTAAGAGCTTCAATGATGAAGGGTATGGACCTGTCCCCACAAGGTGGAAGGGAACTTGTCAAAGTGATGCAGACCCCAAGTTCCATTGTAACAGAAAATTGATTGGATCAAGATTCTTCAACATAGGCTATGGTGAACTTAGTGCTACCTTCAATTCTTCAAGAGACAATGTAGGCCATGGAACCCACACTTTATCCATAGCTGGTGGCAATTTTGTCTCTGGAGCTAATGTTTTGGGAATGGGGAACGGAACTATTAAAGGTGGCTCCCCTCGAGCCCGTGTTGCGTCCTACAAGGTTTGTTGGCCAGAAGAAAACGGCGAGTGTTTGGACCCAAATACCTTAGCTGCTTTTGAAGCTGCAATTGACGATGGCGTTGATGTTATCTCAATTTCTGTCGGTGGAGAGCCAAAGGAGTTTTTTAGTGATGCACTCTCTGTAGGAGCTTTCCATGCAGTTGAGCGAGGTATTGTTGTTGTTTGCTCGGCTGGGAACATCGGACCAACTCCTGGGACCGTATCAAATGTGTCGCCATGGATTATAACTGTTGGCGCTAGTTCCATCAATAGGGATTTCACCAATTTTGTGGTCCTGGGGAACAAGAAGAAACTCAAGGGCACAAGCTTTTCTTCTAAGGCAATGCCATTTAACAAGTTCTACCCTCTAATCAATGCTGTGGATGCAAAAGCCAACAATGTCTCCAATAGTGATGCGGAAGTTTGTGAGGAGGGCTCGCTTGATCCCATGAAGTTAACAGGGAAGATTGTGATTTGCCTTCGAGGGGGTCTTCCAAGAGTGTCTAAGGGTTATGTAGCTGCCAAGGCAGGGGCTGTTGGAATGATTTTGGTTAACGATGAGGAAAGTGGAAATGCAATTTTAACTGATATACATATCCTTCCAGCTTCCCATGTAACCTATAATGACAGCATATCCGTCTTCCAGTACATCAATTCTACAAAGACACCAACGGCTTACATTAGTTCTGTGATGACAGAACTGGAAATCAAACCATCCCCACTAATGGCTGATTTCTCATCAAGAGGCCCCAATACAATAGAGGAGTCAATCCTTAAGCCTGATATAACAGCTCCAGGTGTGAATATACTGGCGGCTTACCCCGATGGAGTACCATTGACAGAACTACCATTGGACAATCGTCAAGCTCCTTTCAAGGTAGATTCTGGCACATCCATGGCCTGTCCCCATGTTGCTGGCATTGTAGGCCTTCTCAAAATCCTAAATCCCAAATGGAGTCCAGCCGCCATTAAATCTGCAATCATGACGACAGCCAAAACAACGGACAACAGTTTACATCCAATTATGGACTCCACAGGACTCAAAGCAACTCCATTGGCATACGGTGCAGGACATGTTAATCCAAACAGTGCGATGGACCCTGGCCTCGTTTACGACATTACAATCGACGATTACCTCAATTTCTTGTGTGCTCGAGGCTACAATGCAACACAAATCAAGAAAATATCCAAGAAGACCTTCGTTTGCGATGGATCGTTCAAAGTGACGGATTTGAATTACCCTTCGATCTCAGTTATAGATCTGAAAATGGGACCTGTGACGATCAATCGAAAAGTGAAGAATGTGGGAAGTCCGGGGATGTATGTCGCTCGAGTGAAGGCGCCACTGGAAGTTTCTATCATCGTTGAGCCAAGTAGATTGCATTTTACGGCCATGGATGAAGAGAAGAGCTTCAAGGTCGTGTTGAATAGCAGTGGAAAGGGCAACGAACAAGGTTATGTGTTTGGGGAATTAGTATGGTCTGATGGCAAACACTATGTTAGGAGTCCAATTGTTGTGAATTTAGGGGAATAG 2301 43.5 MDAFNLSSILLISLLLTLLQTSTIATKKPYIVYLGSHSHGSSSSSLDHRRATVSHYDLLGSVLRSKKIAKEAILYSYNKNINGFAAMLDEKQAADVAKFPNVVSVFESQAKKLHTTQSWHFLGIEKHEEIPLNSIWNAAKFGDDIIIANFDTGVWPESKSFNDEGYGPVPTRWKGTCQSDADPKFHCNRKLIGSRFFNIGYGELSATFNSSRDNVGHGTHTLSIAGGNFVSGANVLGMGNGTIKGGSPRARVASYKVCWPEENGECLDPNTLAAFEAAIDDGVDVISISVGGEPKEFFSDALSVGAFHAVERGIVVVCSAGNIGPTPGTVSNVSPWIITVGASSINRDFTNFVVLGNKKKLKGTSFSSKAMPFNKFYPLINAVDAKANNVSNSDAEVCEEGSLDPMKLTGKIVICLRGGLPRVSKGYVAAKAGAVGMILVNDEESGNAILTDIHILPASHVTYNDSISVFQYINSTKTPTAYISSVMTELEIKPSPLMADFSSRGPNTIEESILKPDITAPGVNILAAYPDGVPLTELPLDNRQAPFKVDSGTSMACPHVAGIVGLLKILNPKWSPAAIKSAIMTTAKTTDNSLHPIMDSTGLKATPLAYGAGHVNPNSAMDPGLVYDITIDDYLNFLCARGYNATQIKKISKKTFVCDGSFKVTDLNYPSISVIDLKMGPVTINRKVKNVGSPGMYVARVKAPLEVSIIVEPSRLHFTAMDEEKSFKVVLNSSGKGNEQGYVFGELVWSDGKHYVRSPIVVNLGE 766
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5129889 5133169 - CmPI595203_10g012290.1 Cmu10g1229 426759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu10g1229 766 Gene3D - 346 490 - -
Cmu10g1229 766 PRINTS Subtilisin serine protease family (S8) signature 142 161 IPR015500 -
Cmu10g1229 766 PRINTS Subtilisin serine protease family (S8) signature 213 226 IPR015500 -
Cmu10g1229 766 PRINTS Subtilisin serine protease family (S8) signature 551 567 IPR015500 -
Cmu10g1229 766 CDD Peptidases_S8_3 111 587 IPR034197 -
Cmu10g1229 766 Gene3D Peptidase S8/S53 domain 144 634 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cmu10g1229 766 SUPERFAMILY Subtilisin-like 114 625 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cmu10g1229 766 Pfam Fibronectin type-III domain 666 762 IPR041469 -
Cmu10g1229 766 CDD PA_subtilisin_like 353 483 - -
Cmu10g1229 766 ProSitePatterns Serine proteases, subtilase family, serine active site. 552 562 IPR023828 -
Cmu10g1229 766 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 30 761 IPR045051 -
Cmu10g1229 766 Pfam Peptidase inhibitor I9 30 114 IPR010259 -
Cmu10g1229 766 SUPERFAMILY PA domain 405 463 IPR046450 -
Cmu10g1229 766 Pfam Subtilase family 142 593 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cmu10g1229 766 FunFam Subtilisin-like protease SBT5.3 19 114 - -
Cmu10g1229 766 Pfam PA domain 394 465 IPR003137 -
Cmu10g1229 766 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 114 IPR037045 -
Cmu10g1229 766 ProSiteProfiles Serine proteases, subtilase domain profile. 118 621 - -
Cmu10g1229 766 FunFam Subtilisin-like protease SBT1.5 144 358 - -
Cmu10g1229 766 FunFam subtilisin-like protease SBT1.5 346 490 - -
Cmu10g1229 766 Gene3D - 638 764 - -
Cmu10g1229 766 FunFam Subtilisin-like protease SBT1.5 638 765 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu09g0128 Cmu-Chr9:1464371 Cmu10g1229 Cmu-Chr10:5129889 1.10E-154 dispersed
Cmu10g1224 Cmu-Chr10:5054546 Cmu10g1229 Cmu-Chr10:5129889 4.50E-270 dispersed
Cmu10g1225 Cmu-Chr10:5062808 Cmu10g1229 Cmu-Chr10:5129889 1.20E-287 dispersed
Cmu10g1229 Cmu-Chr10:5129889 Cmu11g1195 Cmu-Chr11:23258692 9.20E-82 dispersed
Cmu10g1228 Cmu-Chr10:5120398 Cmu10g1229 Cmu-Chr10:5129889 9.00E-122 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu10g1229 - - - 0.0