Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu10g1236 ATGACTACCACGGCGGAGGAAACAACCATCACTTTCTCCTCCGATCATGGCGCCGCCCAAGAAAAACAACACTACGCTTACGCTATGCAGCTGGTTACCTCATCGGTGCTGCCAATGACACTCCAAGCAGCGTTCGAGCTCGGTGTGTTCGAGATCTTGGCAAAGGCTGGGGATGGGGCCAAGCTCTCTCCGCCAGAGATAGCGGCTGAGATAACTACGACAAACCCGGATGCAGCGTCGATGATTGATCGGATGTTGAGGCTTCTCGCCAGCCACTCGGTGGTGGGATGCTCTGTGGGATTTGATGAAGATGGGAAAATGCAGAGACTTTATAGCCTTACCCCAGTTTCTAAGTATTATGTTCGTAATCAAGATGGTGTCTCGTTGGGTCCAACTTTGTCGTTGATTCAAGATAAAGTCTTTCTCCATAGCTGGAGTGAGCTAAAGAATGCAGTTATTGAAGGAGGAGTTCCTTTCAATAGGGCTCATGGGGGAGTTCATGCCTTTGAATATCCAGGCTTGGATCCAAGATTTAACCAAGTTTTCAATGCTGCAATGATAAATCACACCACTATAGCCATCAAGAAAATTGTCAAATCCTACAAAGGCTTTGAAAACATCAAGCAACTAGTTGATGTTGGTGGTGGCCTTGGGGTCACCCTTCAAATCATCACTTCTACATACCCTTCCATCAAAGCCATCAACTTCGACTTACCTCATGTCATTCGCGATGCCCCTCCCTATCCTGGTGTAGAACATGTGGGAGGAGACATGTTTGAGAAAGTTCCAAATGGAGATGCTGTTTTCATGAAGTGGATACTTCATGATTGGAGTGACGAGCATTGTGTAAAGTTATTGAAAAATTGCTACGTTGCGATCCCAAATGAAGGAAAGGTAATCATAGTGGATTCAGTGGTTCCAACAATACTTGAAACCACAGATGTAACAAAATGCATTGCCCAATGCGATGTGCTTATGATGACTCAAAATCCAGGAGGAAAGGAGCGAACTCGAGATGAATTCGAGGCCCTCGCAACCAAAGCTGGGTTTAAACATGTCATATTCCAGTGCTTTGTGTCTAATCTCTGGGTTATAGAGTTTCTTAAAAATTAA 1113 45.1 MTTTAEETTITFSSDHGAAQEKQHYAYAMQLVTSSVLPMTLQAAFELGVFEILAKAGDGAKLSPPEIAAEITTTNPDAASMIDRMLRLLASHSVVGCSVGFDEDGKMQRLYSLTPVSKYYVRNQDGVSLGPTLSLIQDKVFLHSWSELKNAVIEGGVPFNRAHGGVHAFEYPGLDPRFNQVFNAAMINHTTIAIKKIVKSYKGFENIKQLVDVGGGLGVTLQIITSTYPSIKAINFDLPHVIRDAPPYPGVEHVGGDMFEKVPNGDAVFMKWILHDWSDEHCVKLLKNCYVAIPNEGKVIIVDSVVPTILETTDVTKCIAQCDVLMMTQNPGGKERTRDEFEALATKAGFKHVIFQCFVSNLWVIEFLKN 370
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5249650 5252315 - CmPI595203_10g012360.1 Cmu10g1236 426766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu10g1236 370 PIRSF O-mtase 6 369 IPR016461 GO:0008168(InterPro)
Cmu10g1236 370 PANTHER O-METHYLTRANSFERASE 25 356 IPR016461 GO:0008168(InterPro)|GO:0008171(PANTHER)|GO:0008757(PANTHER)|GO:0019438(PANTHER)|GO:0032259(PANTHER)
Cmu10g1236 370 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 29 369 IPR016461 GO:0008168(InterPro)
Cmu10g1236 370 Pfam Dimerisation domain 39 90 IPR012967 GO:0046983(InterPro)
Cmu10g1236 370 FunFam Caffeic acid O-methyltransferase 121 369 - -
Cmu10g1236 370 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 126 367 IPR029063 -
Cmu10g1236 370 Gene3D Vaccinia Virus protein VP39 121 369 IPR029063 -
Cmu10g1236 370 FunFam Caffeic acid 3-O-methyltransferase 5 120 - -
Cmu10g1236 370 SUPERFAMILY Winged helix DNA-binding domain 21 123 IPR036390 -
Cmu10g1236 370 Gene3D - 6 120 IPR036388 -
Cmu10g1236 370 Pfam O-methyltransferase domain 145 351 IPR001077 GO:0008171(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu07g1711 Cmu-Chr7:32356138 Cmu10g1236 Cmu-Chr10:5249650 3.20E-114 dispersed
Cmu10g1236 Cmu-Chr10:5249650 Cmu10g2070 Cmu-Chr10:26576577 1.10E-24 dispersed
Cmu10g1235 Cmu-Chr10:5232985 Cmu10g1236 Cmu-Chr10:5249650 2.30E-140 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu10g1236 K13066 - csv:101214916 588.956