Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu10g1344 ATGATGAATAAGGATTCCCTTTTCCACATCGAGAATATCCTTCTCATTCTTCTCAAGCTTTCTATATTCGCATTCTGCTTCGACTTCAGCTTCAGCTTCTTGGGTGCCTTCAGATACCACCAAGCAAATTACATGGTTGATCTAGATATCCAGATTCCAAGCGCTTTCGATCCCTTTGCTGACGCCAAAGACTCGGATGCCCCCGGAACCAAAGAATACGTCCATATAAGGGTCCAACAGAGGAATGGAAAGAAGTGTCTAACGACAGTTCAAGGGCTTAAGAAAGAGTTCAGCTATGATAAGATCCTTAAGGACCTGAAGAAGGACTTCTGTTGCAACGGGAATGTTGTTCAGGATAAAGAGCTGGGGAAGATAATCCAACTTCAAGGCGATCAGCGCAAGAACGTCTCTCAGTTCCTTGTTCAGGCTGGCCTCGTCAAGAAGGATCAAATCAAGATACATGGTTTTTGA 471 44.16 MMNKDSLFHIENILLILLKLSIFAFCFDFSFSFLGAFRYHQANYMVDLDIQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 156
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 6395471 6397334 - CmPI595203_10g013440.1 Cmu10g1344 426874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu10g1344 156 FunFam Eukaryotic translation initiation factor SUI1 46 156 - -
Cmu10g1344 156 Gene3D - 35 156 - -
Cmu10g1344 156 NCBIfam translation initiation factor SUI1 49 156 IPR005874 GO:0003743(InterPro)
Cmu10g1344 156 SUPERFAMILY eIF1-like 43 156 IPR036877 GO:0003743(InterPro)|GO:0006413(InterPro)
Cmu10g1344 156 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 45 156 - GO:0003723(PANTHER)
Cmu10g1344 156 CDD eIF1_SUI1 72 155 IPR005874 GO:0003743(InterPro)
Cmu10g1344 156 ProSiteProfiles Translation initiation factor SUI1 family profile. 74 144 IPR001950 GO:0003743(InterPro)|GO:0006413(InterPro)
Cmu10g1344 156 Pfam Translation initiation factor SUI1 71 145 IPR001950 GO:0003743(InterPro)|GO:0006413(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu09g1034 Cmu-Chr9:10416046 Cmu10g1344 Cmu-Chr10:6395471 6.80E-53 transposed
Cmu10g1344 Cmu-Chr10:6395471 Cmu02g0184 Cmu-Chr2:1739788 5.30E-45 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu10g1344 K03113 - csv:101214921 228.794