Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu10g1567 ATGGCGACCAACAAGGAGAAAGAACCAGTTTGTGTGACCGGAGCCAATGGATTCATCGGATCCTGGGTCGTCCGTACGCTTTTGGAGTCTGGCTACACAACAATACATACCTCCATCTTACCCGGCTCCGATTCTTCCCATTTGTTCAATCTCCAGGCCTCCACTAACCCTAATGCTAACCTTAGGGTTTTCGAAGCGAATGTGATGGACGGCGAGGCGGTGGCCAGGGCTGTCGAAGGCTGCAAGGGCGTATTCCACATTGCCTCACCCTGCACATTGGAGGATCCGATTGATCCGCAGAAAGAATTGGTGGAGCCGGCGGTGCAAGGCACTATCAATGTTCTTAATGCGGCGAAGAAGTTCGGAGTGAGGCGTGTTGTTCTTACTTCTTCTATTTCTGCTCTTGTCCCTAACCCCGGTTGGCCGTCTGGTATGCCTTTCGATGAATCCTCATGGACAGACATAGAGTACTGCAAATCGCGCAAGAAATGGTATCCAGTTTCAAAAACATTGGCAGAGAAATCAGCATGGGAGTTTGTAGAGAATCATGGACTGGATGTTGTTTCCATCCTGCCAGCCACATGTCTTGGTCCTCTTCTCCAACCTAATTTGAACGCAAGTTGTGCTGTATTGCTGCAGTTGCTCCAGGGATCCCAGGATAGTCAGGAATATCACTGGTTGGGTGCTGTGCATGTCAAAGATATTGCAAAAGCACAAATTTTATTGTTTGAGTCTCCCACTGCTTCTGGTAGATATCTTTGCACCAATGGTATCTATCAATTTTCCGATTTTGCGGACAAAGTCTCAAAAATATGCCCTCAATTTCCAGTTCACAGATTTGTGGGAGAAACACAACCCGGGTTGGTTGCCTGCAAAGATGCAGCCAAGAGGTTAATTGATCTGGGACTTGTTTTCACCCCTCTTGAAGTTGCCATTCAAGATACCCTTGAAAGTCTTAGAAGCAAAGGCTTTTTGGATCAGTGA 984 47.36 MATNKEKEPVCVTGANGFIGSWVVRTLLESGYTTIHTSILPGSDSSHLFNLQASTNPNANLRVFEANVMDGEAVARAVEGCKGVFHIASPCTLEDPIDPQKELVEPAVQGTINVLNAAKKFGVRRVVLTSSISALVPNPGWPSGMPFDESSWTDIEYCKSRKKWYPVSKTLAEKSAWEFVENHGLDVVSILPATCLGPLLQPNLNASCAVLLQLLQGSQDSQEYHWLGAVHVKDIAKAQILLFESPTASGRYLCTNGIYQFSDFADKVSKICPQFPVHRFVGETQPGLVACKDAAKRLIDLGLVFTPLEVAIQDTLESLRSKGFLDQ 327
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 11584086 11586926 + CmPI595203_10g015670.1 Cmu10g1567 427097
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu10g1567 327 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 320 IPR036291 -
Cmu10g1567 327 FunFam Cinnamoyl-CoA reductase 1 3 327 - -
Cmu10g1567 327 CDD FR_SDR_e 10 303 - -
Cmu10g1567 327 Gene3D - 1 327 - -
Cmu10g1567 327 Pfam NAD dependent epimerase/dehydratase family 10 248 IPR001509 -
Cmu10g1567 327 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 10 317 IPR050425 GO:0016616(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu03g0658 Cmu-Chr3:768605 Cmu10g1567 Cmu-Chr10:11584086 1.70E-77 dispersed
Cmu10g1567 Cmu-Chr10:11584086 Cmu10g2063 Cmu-Chr10:26494443 5.90E-62 dispersed
Cmu10g1567 Cmu-Chr10:11584086 Cmu11g1890 Cmu-Chr11:30921141 1.70E-61 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu10g1567 - - - 0.0