Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu10g1767 ATGGCCTTTGACAAGGCTGTGAAGAAAAAATACATGGAGCTTGCTAATGCGGAGCCTGTTGCTAATGGAGAATTGGATGAAATGGAAAGGGAACCTTCAGCAAGGCTTCTTTTGCGGGAGGCTGGTCTGTCCCGTACGCATTTTCCGGGCATGGTGAGGAAGAGAGCTTACATATTTGATGGAAACGGCAATTACTATAACAAGGAATGGGATCTTACTGAGGGTAGGGGAAAGGAATTCTGTTGGTATCATGTAGAACTTCCAAAAGGAAATCAAAAACTGGCGCAATCTGCTCAATATCTCATTGATGTTCTTTGCCCACCTTTGAAACTTCAAGATATTCTCTCTCTTGTAAGCAATGGACCTTTTTGTGGACATGTTGATGGGGCTCTTGTCTTTAGAGTCAATTCACCTGGCCCTGCATCTAGTGATTTTACATTCAGAATTGCTGCTAGAATTACTGAAAATTCTGTCATCACCATGTCTTTGGGCCGTGTTCCGAGATTAGGATTCTCACCGGTCGGTCAGTCTCTTCTCTCAGAGGTTCCTAGTGTGGAGACGCCCTCTCACTTTAGAGGTGAGCAGAGAGAAAGTGGGGGCATCGTGATTAGGGAGCATGTTCTCGAATTCTTGTTGACAATGAATCATTCGGAGGAGGCTGACAATCCTGTGCCAGCATCCCTTTCAAATCTGGTTGTTCATATTATTGACACACATATGGATCACCTTCAAGATGTTGTGACTAAGCTTGAGATTGAGTTGGATTCTGTGGAGCTTGAAATGGATAAAGGTGGATTTGCCTTAAAAAAACAAATGCTTGATGACCGAAGATTCCCCAAAATGAACCTTAATTTGCAGCGGCTCCTGCAGGTGATTGCACATGGGGAACAAGTCTTTCCACGAGTGAAAGAAAAGTGTTCTTCTAAACATTGGTTTGCCAGTGAAGACATCAGCGCGCTTGAGGAACTAATTGGACGACTAAGACGGTTAAAAGAGAATGTGGGATTTATAGCAAACCGTGTCACTGCTATTCAGACTGGTCTCGATAGCTGGCAAGCCGAACAAATTAACAGGAAACTCTATTATCTATCATTTCTTTCCATCATATTCTTACCCTTGTCCGTCATTACTGGAGTATTTGGCATGAATGTTGGTGGAGTACCATGGACCGAGCAGAGAAATCCCGAGTTGAAAGAGGGATTTCGTAATGTGATGTTTCTCTGCGTTGTAATGCTACTACTGGTGCTGCTCTGCTTCAGTTTCCCTGCTCTTTACACCTACTTAGCGACATGGAATCGGCGGGAGGAGGCTATCTTCGGATTTGATGATATGATATGCCATCCTTTTCATGTGCTCGGTTTGTTCCAACCATTAGATGAAAACGCCCTTTTGCAGACCCAGCACCTCGGTCTCGTTCTCGATCTTAGATTTCACCAATGCTTTGATCAGTTCCTCGTCCACCCAGATTGCTGCCCTAATCAATTTTCTCCCTTTTACCAATCGCCTTCCGACATGGCCACCGGCGTGCTGCTCCGTTCTCTTCGACGTCGCGATTTAGCCTCCTCCTCCCTTTCAGCTTACCGATCCTTAACAAGTAATGCCAAGCTGTCGTGGGGAAACTCCCACCTTAGCCAATCATGGGCAAGTTTGTCGAGGCCGTTCAGTTCAAAGCCTGCTGGGAATGATGTAATTGGTATTGACTTGGGTACCACCAATTCTTGTGTTGCTGTCATGGATGGGAAGAATCCAAAAGTTATTGAAAACTCAGAAGGTGCCAGGACCACACCGTCGGTGGTTGCTTTCAATCAGAAAGGTGAACTCCTTGTAGGAACACCAGCAAAGAGACAGGCAGTGACAAATCCAACAAATACGGTGTTTGGAACCAAACGTCTGATTGGTAGACGCTTTGATGACCCTCAGACACAGAAGGAAATGAAGATGGTGCCATACAAAATAGTCAGAGCTCCAAATGGAGATGCTTGGGTTGAAGCAAATGGTCAGCAGTACTCACCAAGTCAGATCGGTGCTTTTGTCCTAACAAAGATGAAGGAAACTGCTGAGGCCTACCTTGGAAAGAGTGTGTCTAAGGCTGTGATTACTGTTCCTGCTTATTTCAATGATGCACAGAGACAGGCAACAAAGGATGCTGGCAGGATTGCTGGTTTGGATGTTCTTAGAATTATCAATGAGCCCACTGCTGCTGCACTTTCTTATGGAATGAACAATAAGGAGGGCCTTATTGCTGTCTTTGATCTTGGTGGTGGCACATTCGATGTGTCCATCTTGGAGATATCCAATGGTGTTTTTGAGGTGAAAGCAACAAATGGTGACACATTCTTGGGTGGAGAGGATTTTGACAATGCTCTTTTGGACTTCCTAGTGAGCGAGTTCAAGCGAAGTGAGGGAATTGACCTTACAAAGGACAGGCTTGCCTTGCAGAGGCTTAGAGAAGCTGCAGAAAAGGCGAAGATCGAACTCTCATCTACATCTCAGACTGAAATTAACCTGCCATTTATCACTGCTGATGCAACTGGTGCAAAGCATCTGAACATCACTTTGACGAGGTCGAAGTTTGAAAGTCTTGTCAATCATTTAATTGAAAGGACCAAGGCCCCATGTAAAAATTGTTTGAAGGATGCCAGTATTTCTATCAAAGAAGTAGATGAAGTGCTTTTAGTTGGTGGAATGACTCGTGTTCCAAAGGTGCAAGACGTTGTCACAGAAATTTTCGGAAAGAGCCCCAGCAAAGGAGTGAATCCTGATGAAGCGGTTGCTATGGGAGCTGCAATTCAGGGTGGCATTCTTCGTGGTGATGTCAAAGAATTGCTTCTTCTGGATGTTACCCCACTATCACTTGGTATCGAGACACTTGGTGGTATCTTTACAAGGTTGATCAGTCGGAACACTACCATTCCAACTAAGAAGAGTCAGGTGTTCTCTACCGCAGCTGACAATCAGACTCAGGTCGGTATCAAGGTATTGCAAGGTGAGAGGGAAATGGCTTCTGACAACAAGCTCCTAGGGGAGTTCGAGTTGGTTGGAATTCCTCCTGCTCCGAGAGGAATGCCTCAAATTGAGGTGACATTTGACATCGACGCCAATGGCATTGTTACTGTCTCTGCAAAGGACAAGTCCACTGGTAAAGAACAACAAATCACCATTCGATCATCTGGAGGACTCTCAGAAGATGAAATTGACAAAATGGTCAAGGAAGCAGAGCTACACGCCCAGAAAGATCAAGAGAGAAAAGCTCTTATCGACATCAGAAACAGTGCAGATACTACCATCTACAGCATCGAGAAGAGCTTGGGTGAGTACAGAGAGAAAATACCTAGCGAGGTTGCCAAAGAAATCGAGGATGCAGTGGCTGACTTGAGGAAGGCAATGTCAGAAGACAACCTTGAAGAGATCAAGTCAAAACTCGATGCTGCAAACAAAGCTGTGTCCAAGATTGGACAGCATATGGCTGGTGGTTCAGGTGGTGGTGGTGCTTCTGGAGGACCTCAGGGTGGCGAACAAGCTTCTGAAGCCGAGTATGAAGAGGTGAAGAAATAA 3555 45.2 MAFDKAVKKKYMELANAEPVANGELDEMEREPSARLLLREAGLSRTHFPGMVRKRAYIFDGNGNYYNKEWDLTEGRGKEFCWYHVELPKGNQKLAQSAQYLIDVLCPPLKLQDILSLVSNGPFCGHVDGALVFRVNSPGPASSDFTFRIAARITENSVITMSLGRVPRLGFSPVGQSLLSEVPSVETPSHFRGEQRESGGIVIREHVLEFLLTMNHSEEADNPVPASLSNLVVHIIDTHMDHLQDVVTKLEIELDSVELEMDKGGFALKKQMLDDRRFPKMNLNLQRLLQVIAHGEQVFPRVKEKCSSKHWFASEDISALEELIGRLRRLKENVGFIANRVTAIQTGLDSWQAEQINRKLYYLSFLSIIFLPLSVITGVFGMNVGGVPWTEQRNPELKEGFRNVMFLCVVMLLLVLLCFSFPALYTYLATWNRREEAIFGFDDMICHPFHVLGLFQPLDENALLQTQHLGLVLDLRFHQCFDQFLVHPDCCPNQFSPFYQSPSDMATGVLLRSLRRRDLASSSLSAYRSLTSNAKLSWGNSHLSQSWASLSRPFSSKPAGNDVIGIDLGTTNSCVAVMDGKNPKVIENSEGARTTPSVVAFNQKGELLVGTPAKRQAVTNPTNTVFGTKRLIGRRFDDPQTQKEMKMVPYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAEAYLGKSVSKAVITVPAYFNDAQRQATKDAGRIAGLDVLRIINEPTAAALSYGMNNKEGLIAVFDLGGGTFDVSILEISNGVFEVKATNGDTFLGGEDFDNALLDFLVSEFKRSEGIDLTKDRLALQRLREAAEKAKIELSSTSQTEINLPFITADATGAKHLNITLTRSKFESLVNHLIERTKAPCKNCLKDASISIKEVDEVLLVGGMTRVPKVQDVVTEIFGKSPSKGVNPDEAVAMGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLISRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKLLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKSTGKEQQITIRSSGGLSEDEIDKMVKEAELHAQKDQERKALIDIRNSADTTIYSIEKSLGEYREKIPSEVAKEIEDAVADLRKAMSEDNLEEIKSKLDAANKAVSKIGQHMAGGSGGGGASGGPQGGEQASEAEYEEVKK 1184
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 21780823 21790846 - CmPI595203_10g017670.1 Cmu10g1767 427297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu10g1767 1184 Coils Coil 805 832 - -
Cmu10g1767 1184 PANTHER OS08G0130000 PROTEIN 12 436 - -
Cmu10g1767 1184 FunFam Molecular chaperone DnaK 564 745 - -
Cmu10g1767 1184 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 937 1093 IPR029047 -
Cmu10g1767 1184 FunFam Chaperone protein DnaK HSP70 931 1114 - -
Cmu10g1767 1184 ProSitePatterns Heat shock hsp70 proteins family signature 3. 890 904 IPR018181 -
Cmu10g1767 1184 FunFam Chaperone protein HscA homolog 746 802 - -
Cmu10g1767 1184 SUPERFAMILY CorA soluble domain-like 54 345 IPR045861 -
Cmu10g1767 1184 Pfam Hsp70 protein 563 1155 IPR013126 GO:0005524(InterPro)|GO:0140662(InterPro)
Cmu10g1767 1184 PRINTS 70kDa heat shock protein signature 590 602 - -
Cmu10g1767 1184 PRINTS 70kDa heat shock protein signature 941 960 - -
Cmu10g1767 1184 PRINTS 70kDa heat shock protein signature 562 575 - -
Cmu10g1767 1184 PRINTS 70kDa heat shock protein signature 697 717 - -
Cmu10g1767 1184 PRINTS 70kDa heat shock protein signature 755 765 - -
Cmu10g1767 1184 PRINTS 70kDa heat shock protein signature 918 938 - -
Cmu10g1767 1184 PRINTS 70kDa heat shock protein signature 1022 1038 - -
Cmu10g1767 1184 PRINTS 70kDa heat shock protein signature 613 621 - -
Cmu10g1767 1184 PRINTS 70kDa heat shock protein signature 887 903 - -
Cmu10g1767 1184 SUPERFAMILY Actin-like ATPase domain 744 935 IPR043129 -
Cmu10g1767 1184 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 935 1059 IPR029047 -
Cmu10g1767 1184 FunFam Molecular chaperone DnaK 1060 1159 - -
Cmu10g1767 1184 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 355 419 IPR045863 -
Cmu10g1767 1184 Gene3D Magnesium transport protein CorA, transmembrane region 352 427 - -
Cmu10g1767 1184 SUPERFAMILY Actin-like ATPase domain 563 743 IPR043129 -
Cmu10g1767 1184 Coils Coil 1115 1147 - -
Cmu10g1767 1184 ProSitePatterns Heat shock hsp70 proteins family signature 2. 749 762 IPR018181 -
Cmu10g1767 1184 NCBIfam molecular chaperone DnaK 563 1155 IPR012725 GO:0005524(InterPro)|GO:0006457(InterPro)|GO:0051082(InterPro)
Cmu10g1767 1184 FunFam Molecular chaperone DnaK 782 869 - -
Cmu10g1767 1184 Coils Coil 320 340 - -
Cmu10g1767 1184 Gene3D - 1060 1157 IPR029048 -
Cmu10g1767 1184 Hamap Chaperone protein DnaK [dnaK]. 560 1182 IPR012725 GO:0005524(InterPro)|GO:0006457(InterPro)|GO:0051082(InterPro)
Cmu10g1767 1184 CDD HSPA9-like_NBD 560 935 - -
Cmu10g1767 1184 Pfam CorA-like Mg2+ transporter protein 223 419 IPR002523 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro)
Cmu10g1767 1184 ProSitePatterns Heat shock hsp70 proteins family signature 1. 566 573 IPR018181 -
Cmu10g1767 1184 Gene3D - 739 919 - -
Cmu10g1767 1184 FunFam Heat shock protein 9 626 677 - -
Cmu10g1767 1184 MobiDBLite consensus disorder prediction 1152 1184 - -
Cmu10g1767 1184 Coils Coil 240 260 - -
Cmu10g1767 1184 Gene3D Actin; Chain A, domain 4 782 869 - -
Cmu10g1767 1184 Gene3D Magnesium transport protein CorA, transmembrane region 225 351 - -
Cmu10g1767 1184 Gene3D - 564 932 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu09g0964 Cmu-Chr9:9715936 Cmu10g1767 Cmu-Chr10:21780823 3.80E-183 dispersed
Cmu10g1767 Cmu-Chr10:21780823 Cmu11g1149 Cmu-Chr11:21717913 1.00E-156 dispersed
Cmu10g1767 Cmu-Chr10:21780823 Cmu09g1914 Cmu-Chr9:35190628 3.90E-156 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu10g1767 K04043 - csv:101216102 1235.32