Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu10g1843 ATGGCTAATCGGAGCTCCGAACAAGTATCCGATGCCATTCCCGACATGTCGTCATCCGACACAATCGTGAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGTTGTTGCACTGTCGGTGTCGGAGAGGAAACTGTCATGGCAAAAGCTCCGACGATTCGACTCGTTGGATTTAGAGTCACGTAAACTCCATGGTCATGATGATCATCATCATTCCTATGCCAAGGAGAAGAAATGGAGTGTAATCTTACACTTAGCATTCCAAAGCATCGGCATAGTTTACGGCGACATCGGAACGTCGCCGTTGTACGTGTTCTCGAGCACATTTCCAGATGGAATAAAGCACAACGACGATATTTTAGGGGCGTTGTCGTTGATCGTTTACACCATAACTTTGATTCCTGTAATCAAGTATGTGTTTATTGTTTTGAGAGCAAACGACAATGGAGAAGGGGGAACCTTTGCATTGTACTCATTGATATGTCGATATGCAAAAGTGGGATTGATTCCGAATGCGGAGATTGAGGATCGAGAAGTGTCGAATTATCAATTAAGTTTGCCGAATGAAAGAGAGAAGAGAGCTTCAAGGATTCAATCAAAGCTAGAGAAAAGCCATTTTGCAAAGGTGTTTCTTCTATTTGCAACTATGCTTGGGACTTCCATGGTCATTGGAGATGGTGTTCTCACTCCTTGTATCTCAGTGTTATCTGCTGTGGGAGGGATCAAGGAGGCTACCCCTGCAATGACAGAAGGTAAGATTGTCTGGGCATCAGTAGGCATATTGGTGTGCCTATTCATGGTTCAAAGATTTGGAACAGACAAAGTTGGCTACACTTTTGCTCCAATTATCCTCATTTGGTTTGCTTTCAATGCTGGAATTGGTATCTACAACTTCATAAAATATGACCCAACTGTCATTAAAGCCTTAAATCCAAACTACATTTTTCAATACTTCCAAAGGAACAAAAAGGATGCTTGGATTTCTCTTGGTGGCATTGTTCTTGCCATTACAGGGACCGAAGCCTTGTTCGCCGACGTCGGGCATTTCAGCGTCCGATCGATCCAGCTAAGCATGTCAGCAGTGACCTACCCAGCTCTAATATTTGCTTACATAGGCCAAGCTTCGTTTCTTCGCAAGCATGATGATCTAGTGTCGGACACATTCTACAAGTCAATTCCTGGAAGTTTGTATTGGCCAGTGTTTGTCGTGGCAGTTTCAGCATCAATCATAGCAAGCCAAGCAATGATTTCAGGAACATTCTCAATAATTCAACAATCACTTTCACTTGGATGCTTCCCAAGAGTTAAAGTGGTTCATACATCAGCTAAGTATGAAGGGCAAGTTTATGTTCCTGAGATAAATTACCTTTTGATGTTGGCTTGTGTTGGTGTTACTTTGGGGTTCAAGAACACTACAAAGATTGGGAATGCATATGGAATAGCAGTGGTTTTTGTGATGACACTCACATCCTCTTTCTTAGTACTCGTTATGGTTATGATATGGAAAACTCATATCCTTTTCATAATCGCTTACATTCTCATCATTGGTAGTGTGGAATTGGTGTATTTGAGTTCAGTCCTTTACAAGTTTGACCAAGGAGGCTATCTTCCTTTGGCTTTTGCAGCTGCTTTGATGACAATCATGTATGTGTGGAATAGTGTGTTTAGAAAGAAGTACTTTTATGAGCTCAATAACAAAATCTCTACAGAAAAGCTCAATGGGATGGTGAATGCCACCAACTTTAGAAGAATTCCAGGCATTGCATTCTTCTACTCTGAGCTTGTTCAAGGCATCCCTCCCATCTTCAAGCATTACGTCGACCACATTCCTGCACTGCATTCTGTGCTCGTCTTCATCACCATTAAATCGCTTCCTGTGAGCAAGGTTCCGGCAGATGAACGTTTCCTCTTCCGACAAGTAGAGGCGAAGGAGATCGACGTGTTTCGTTGTGTTGTTCGATACGGGTACACGGATGTGCAGACAGAACAAGAATCGTTTGAGAAGATATTGATTGAAAGATTGGAAGAGTTCGAGAGAGAACGACGTAGATTGGTTAAAGGGGCAAATAAAGTTGAAAATGAGAATGAGGATGAGAAAGGATTTGGAGGAATTGGAGAAGCATGGAAGGATGGAGTTGTTCATTTAGTTGGTGAAAGTGAAGTGGTTGCTAAAAAAGGGGCAAGCTTTGGGCAGAGAATGATGATAAACTATGCATATAGCTTCTTGAAGAGGAATTTGAGGCAAACCGATCAAGTATTTGATATTCCTCGCAAGCATATGCTCAAAGTAGGAATGACTTGTGAACTTTAG 2307 41.87 MANRSSEQVSDAIPDMSSSDTIVKEEEEEEEEEVVALSVSERKLSWQKLRRFDSLDLESRKLHGHDDHHHSYAKEKKWSVILHLAFQSIGIVYGDIGTSPLYVFSSTFPDGIKHNDDILGALSLIVYTITLIPVIKYVFIVLRANDNGEGGTFALYSLICRYAKVGLIPNAEIEDREVSNYQLSLPNEREKRASRIQSKLEKSHFAKVFLLFATMLGTSMVIGDGVLTPCISVLSAVGGIKEATPAMTEGKIVWASVGILVCLFMVQRFGTDKVGYTFAPIILIWFAFNAGIGIYNFIKYDPTVIKALNPNYIFQYFQRNKKDAWISLGGIVLAITGTEALFADVGHFSVRSIQLSMSAVTYPALIFAYIGQASFLRKHDDLVSDTFYKSIPGSLYWPVFVVAVSASIIASQAMISGTFSIIQQSLSLGCFPRVKVVHTSAKYEGQVYVPEINYLLMLACVGVTLGFKNTTKIGNAYGIAVVFVMTLTSSFLVLVMVMIWKTHILFIIAYILIIGSVELVYLSSVLYKFDQGGYLPLAFAAALMTIMYVWNSVFRKKYFYELNNKISTEKLNGMVNATNFRRIPGIAFFYSELVQGIPPIFKHYVDHIPALHSVLVFITIKSLPVSKVPADERFLFRQVEAKEIDVFRCVVRYGYTDVQTEQESFEKILIERLEEFERERRRLVKGANKVENENEDEKGFGGIGEAWKDGVVHLVGESEVVAKKGASFGQRMMINYAYSFLKRNLRQTDQVFDIPRKHMLKVGMTCEL 768
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 23152869 23158689 + CmPI595203_10g018430.1 Cmu10g1843 427373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu10g1843 768 MobiDBLite consensus disorder prediction 1 31 - -
Cmu10g1843 768 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 65 767 IPR003855 GO:0006813(PANTHER)|GO:0015079(PANTHER)|GO:0015079(InterPro)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cmu10g1843 768 MobiDBLite consensus disorder prediction 1 17 - -
Cmu10g1843 768 Pfam K+ potassium transporter integral membrane domain 84 570 IPR053951 -
Cmu10g1843 768 Pfam K+ potassium transporter C-terminal domain 584 768 IPR053952 -
Cmu10g1843 768 NCBIfam potassium uptake protein 84 767 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cmu10g1843 768 Coils Coil 673 693 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu09g0585 Cmu-Chr9:5342231 Cmu10g1843 Cmu-Chr10:23152869 4.30E-302 dispersed
Cmu10g1843 Cmu-Chr10:23152869 Cmu10g2199 Cmu-Chr10:28068846 8.40E-168 dispersed
Cmu07g1187 Cmu-Chr7:27189078 Cmu10g1843 Cmu-Chr10:23152869 4.10E-226 transposed
Cmu10g1719 Cmu-Chr10:19898253 Cmu10g1843 Cmu-Chr10:23152869 5.50E-161 transposed
Cmu11g0035 Cmu-Chr11:829102 Cmu10g1843 Cmu-Chr10:23152869 1.80E-190 transposed
Cmu10g1843 Cmu-Chr10:23152869 Cmu09g0584 Cmu-Chr9:5323765 3.10E-287 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu10g1843 K03549 - csv:101215797 1281.54