Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu10g1872 ATGGCATCATTTGCTAAAGAAAATGTAGAAAGTGGACAAGCAATTTCTAGTATTATTGGGACGGGAAAATGTGAAAGCTACGTCATTTTTAGTAATGAAACTTCCCTTGGGGATGCATTTCGGATATTCCTATACTTTATGGGCCTTGCATATTGTTTCGTTGGATTATCTGCTATTACTGCTCGATTTTTCCGGTCCATGGAGAATGTTGTGAAGCACTCAAGGAAGGTGGTAGAGATAGATCCGCACACCAATACTGAAATTATTCGATATGAGAAGGTCTGGAACTTTACAATTGCAGATATCAGCTTACTGGCGTTTGGCACTAGCTTTCCTCAAATATCATTAGCTACTATTGATGCTATTCGAAATATTGGCAACCTGTATGCTGGAGGTTTGGGACCTGGAACACTGGTTGGTTCTGCTGCTTTCGACCTTTTTCCCATTCATGCGGTTTGCGTTGTAGTGCCTAAAGCAGGGGAGTTGAAAAAAATATCTGATATAGGAGTTTGGCTAGTTGAGCTCGCTTGGTCTTTCTGGGCTTATATTTGGCTATACATTATTTTGGAGGTGTGGACACCAAATGTAATAACTCTTTGGGAAGCTTTGTTGACTGTGCTACAGTATGCATTACTGCTTACACATGCTTACGCTCAAGATAAGCAATGGCCCTACTTGTCCTTTCCTTTGGCAAGAACTGAGAGGCCAGAGGAATGGGTGCCACCTGAGATTGCTATATGCCCACAGGATAATCCCTGTAGAGACGAATTTCAAGCCCATGAGAATGAGCAGAGAACCATTGTTGACATTTTCTCTATCCATGATAAAGATGAGAAAGTGTATCATGAAGTTCCTGGACATGATGTTGCTGAATCCTCCTGTAGTAATTTTCCAGAGGAGATGGATGGAAAGGCAGACCACCCTCATGTGCTTAAAATTTGGAAACAACAGTTTGTGGATGCACTTTCGTTGGGAACTTCGGAATCAAAGAAGCTGAAAAACGTTTATTTACGACTCGCAAGATTATGCTTTCAGTTGCTTCTTTTTCCATGGAGACTTTTGTTTGCTTTTGTACCTCCTTATCACATTGCTCATGGATGGCTTGCCTTTATTTGCTCCCTTATTTTCATCAGTGCGATAGCTTATGTCGTCACTAAGCTCACAGATTTAATAAGCTGTGTCTCAGGAATAAATCCTTATGTCATAGCATTTACAGCATTGGCAAGTGGAACTTCTTGGCCAGATTTAGTGGCTAGTAAGATTGCTGCCGAGCGCCAGACAACGGCAGACTCTGCCATTGCAAACATTACTTGCAGCAATTCAGTGAACATATACGTGGGAATTGGAGTTCCATGGCTGATAAGCACAACATACAATTTCATAGCGTATAGAGAACCACTAAAGATAAAGGATGCAGCAGGTCTGAGCTTCAGTTTGCTGGTGTTTTTTTCAACTTCAGTGGCTTGCATTGCTGTGCTTGTGTTTAGGCGTCTAACATTAGGTGCAGAACTTGGAGGGCCAAGGCTTTGGGCTTGGGTTACATGTTTCTTTTTCATGTTGCTTTGGCTCATCTTTGTGGTGCTCTCTTCTCTCAAGGTTTCAGATATCATCTGA 1614 41.82 MASFAKENVESGQAISSIIGTGKCESYVIFSNETSLGDAFRIFLYFMGLAYCFVGLSAITARFFRSMENVVKHSRKVVEIDPHTNTEIIRYEKVWNFTIADISLLAFGTSFPQISLATIDAIRNIGNLYAGGLGPGTLVGSAAFDLFPIHAVCVVVPKAGELKKISDIGVWLVELAWSFWAYIWLYIILEVWTPNVITLWEALLTVLQYALLLTHAYAQDKQWPYLSFPLARTERPEEWVPPEIAICPQDNPCRDEFQAHENEQRTIVDIFSIHDKDEKVYHEVPGHDVAESSCSNFPEEMDGKADHPHVLKIWKQQFVDALSLGTSESKKLKNVYLRLARLCFQLLLFPWRLLFAFVPPYHIAHGWLAFICSLIFISAIAYVVTKLTDLISCVSGINPYVIAFTALASGTSWPDLVASKIAAERQTTADSAIANITCSNSVNIYVGIGVPWLISTTYNFIAYREPLKIKDAAGLSFSLLVFFSTSVACIAVLVFRRLTLGAELGGPRLWAWVTCFFFMLLWLIFVVLSSLKVSDII 537
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 23837914 23842938 + CmPI595203_10g018720.1 Cmu10g1872 427402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu10g1872 537 Gene3D - 98 237 IPR044880 -
Cmu10g1872 537 Gene3D - 320 531 IPR044880 -
Cmu10g1872 537 PANTHER SODIUM/CALCIUM EXCHANGER 19 223 IPR051171 GO:0015491(PANTHER)|GO:0016020(PANTHER)|GO:0030001(PANTHER)
Cmu10g1872 537 Pfam Sodium/calcium exchanger protein 45 216 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
Cmu10g1872 537 Pfam Sodium/calcium exchanger protein 365 529 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu10g1872 K03452 - csv:101205540 989.949