Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu10g1924 ATGATCCAGATTCTTCAAGGGACTTTAGAGCTCTTCTGGAGATTGGCTAATCAAGTAATTGATATTAAGAATATCTTGCCTTTGTTCCATAAAGTGACTTTTTCTTATGTTCCGAGAGAGTGGAACTCATATGCGCACTCGTTAGCCAGAGATGGTTTCTTGGGTTCGAGATCTGACGCGTCGGTGATGTCGGTGCCTGCGGCTTCCGTCACCGCAGGTATATTGGAACAGGTCTCTTACCGGTTTCCAAAACATTTGATTTTATTGTGGTTTGTGATTTCCGTAACCAATGCCGATGTCCCCGACGTACCACCAGCACCTTTGGTTGCACCTACTACTCGCAATATGCCTCTACCTGCAAAATTGCCTCTTCACCAACACCATCACCGAAAATATATGTCACCACAAAGTGTGCCAGAAGCTGGACTACCGCCGTCATCTCCTCCTTACTATGGGCATCTTATCACTTCTGGTCACCCACCCACAAGTTCAAATTTTTCCAAACCACTGATGAAGAGTGGATCAGCTCCTCCTGATGGTAGGCTTGAAAACATTGCTCCCATACAGTCCAGTGCTGGTGCTATTCCCTCTGGCTTACCTCAGCCACCACTTTCCCCTATTGCAGCAGACTGTTGCAAACCTGACATGGTGTTAAAACGAGGAAGTGGTGATGACTGCCATTGTGTCTATCCCATAAAAATTGATCTCCTCCTCTTGAACGTATCACAGAATCCTAACTGGAAACTCTTTCTCGAAGAGTTAGCTTCTGAACTTGGTTTACGAGTCTCTCAGATTGAGCTGATAAACTTTTATGTACTTAGTTTATCGAGATTAAATATCTCAATGGACATTACTCCCCACGCTGGGATCAGCTTTTCTGCAGTCGATGCATCTGCAATAAACTCTTCACTTACAATGCATAAAGTTCGTCTGGACCCTACGCTGGTTGGCGATTACCATCTTCTCAATATTACCTGGTTTAAGCCTCCACCTCCTTCTGAAGCTCCTCTAGCTTCTGCATCACCTGTAGCAGCTCCAGCATACCATTTTCCAGCCTCAACATCACTGAGTTCTCCTAGTAAAGGACACCATTCTAATCTGACACTTATTCTTGGTATTGGCGCTGGTTTTTTGTTTGTTGCCATTCTTTTTGTGTTGATAATTTGCTTATGTACATCTCATCGTGGGAAGACTGAAGCACCTCCATTAGTAACTGAAAAACGAAGGGTTGAGGACAAAGTGCCTGTGGCAGGAGCAGGATCTTTCCCTCATCCATCAAGTATGAGATTTCTAACTTATGAAGAACTTAAAGAAGCAACTAATAACTTTGAAGCAGCCAGCATATTGGGGGAGGGCGGTTTTGGCAGGGTTTTTAAGGGTGTCTTAAGTGACGGCACAGCTGTTGCAATCAAGAGGCTTACAAGTGGAGGGCAACAAGGTGACAAGGAATTTTTGGTTGAGGTTGAGATGCTTAGCCGGTTACATCATCGAAATCTTGTTAAACTTGTTGGCTACTACAGTAATCGTGACTCTTCACAAAACCTGCTATGCTATGAACTTGTTCCAAATGGAAGCTTGGAGGCCTGGCTCCACGGTCCTTTGGGTGTTAATTGTCCTTTGGATTGGGACACCAGAATGAAGATTGCACTGGATGCTGCCCGAGGGCTTGCTTACCTTCACGAGGACTCACAACCTTGTGTGATACACAGAGACTTTAAGGCGTCAAATATATTGCTTGAGAACAACTTCCATGCCAAAGTTGCCGACTTCGGTCTTGCTAAACAAGCTCCGGAAGGCAGAGCTAATTACCTTTCTACTCGTGTGATGGGCACATTTGGATACGTCGCTCCTGAGTATGCAATGACGGGCCATCTACTTGTTAAAAGTGATGTTTATAGCTACGGAGTTGTACTTCTTGAGTTGCTCACCGGAAGGAAACCTGTAGATATGTCACAACCATCGGGACAAGAGAACCTGGTCACATGGGCGAGGCCGATTTTGAGAGACAAGGACCGGTTAGAAGAACTTGCTGATCCACGACTTGGAGGAAAGTATCCAAAGGAAGATTTTGTGCGGGTGTGTACCATTGCTGCAGCCTGCGTCGCTCCTGAGGCTGGCCAACGTCCAACTATGGGCGAAGTTGTACAGTCTCTTAAAATGGTACAGCGCGTTACAGAATACCAAGACTCCATGGTACCATCCTCCAACAACCGAACCAATCTAAGACAGTCGTCCACAACTTTCGAGTCTGATGGATCCTCTTCAATGTTCTCTTCTGGTCCTTATTCTGGTTTAAGTGCTTTTGACAATGACAATGTATCTCGGACAGCAATTTTCTCCGAAGATCTTCACGAGGGACGATGA 2364 45.35 MIQILQGTLELFWRLANQVIDIKNILPLFHKVTFSYVPREWNSYAHSLARDGFLGSRSDASVMSVPAASVTAGILEQVSYRFPKHLILLWFVISVTNADVPDVPPAPLVAPTTRNMPLPAKLPLHQHHHRKYMSPQSVPEAGLPPSSPPYYGHLITSGHPPTSSNFSKPLMKSGSAPPDGRLENIAPIQSSAGAIPSGLPQPPLSPIAADCCKPDMVLKRGSGDDCHCVYPIKIDLLLLNVSQNPNWKLFLEELASELGLRVSQIELINFYVLSLSRLNISMDITPHAGISFSAVDASAINSSLTMHKVRLDPTLVGDYHLLNITWFKPPPPSEAPLASASPVAAPAYHFPASTSLSSPSKGHHSNLTLILGIGAGFLFVAILFVLIICLCTSHRGKTEAPPLVTEKRRVEDKVPVAGAGSFPHPSSMRFLTYEELKEATNNFEAASILGEGGFGRVFKGVLSDGTAVAIKRLTSGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSNRDSSQNLLCYELVPNGSLEAWLHGPLGVNCPLDWDTRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRANYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRLEELADPRLGGKYPKEDFVRVCTIAAACVAPEAGQRPTMGEVVQSLKMVQRVTEYQDSMVPSSNNRTNLRQSSTTFESDGSSSMFSSGPYSGLSAFDNDNVSRTAIFSEDLHEGR 787
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 24654674 24663805 - CmPI595203_10g019240.1 Cmu10g1924 427454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu10g1924 787 MobiDBLite consensus disorder prediction 162 182 - -
Cmu10g1924 787 PANTHER OS01G0750732 PROTEIN 210 760 IPR050885 -
Cmu10g1924 787 ProSitePatterns Serine/Threonine protein kinases active-site signature. 567 579 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu10g1924 787 ProSiteProfiles Protein kinase domain profile. 443 721 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu10g1924 787 MobiDBLite consensus disorder prediction 728 769 - -
Cmu10g1924 787 Gene3D Phosphorylase Kinase; domain 1 424 520 - -
Cmu10g1924 787 SUPERFAMILY Protein kinase-like (PK-like) 422 720 IPR011009 -
Cmu10g1924 787 FunFam Receptor-like serine/threonine-protein kinase ALE2 423 520 - -
Cmu10g1924 787 FunFam Receptor-like serine/threonine-protein kinase ALE2 521 738 - -
Cmu10g1924 787 Pfam Protein tyrosine and serine/threonine kinase 446 718 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu10g1924 787 Pfam Reverse transcriptase-like 14 51 IPR002156 GO:0003676(InterPro)|GO:0004523(InterPro)
Cmu10g1924 787 ProSitePatterns Protein kinases ATP-binding region signature. 449 471 IPR017441 GO:0005524(InterPro)
Cmu10g1924 787 Gene3D Transferase(Phosphotransferase) domain 1 521 743 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g1689 Cmu-Chr5:26969532 Cmu10g1924 Cmu-Chr10:24654674 8.40E-09 dispersed
Cmu07g0316 Cmu-Chr7:3116649 Cmu10g1924 Cmu-Chr10:24654674 1.70E-87 dispersed
Cmu08g1295 Cmu-Chr8:25209838 Cmu10g1924 Cmu-Chr10:24654674 3.90E-72 dispersed
Cmu09g0061 Cmu-Chr9:847653 Cmu10g1924 Cmu-Chr10:24654674 6.40E-103 dispersed
Cmu10g1924 Cmu-Chr10:24654674 Cmu10g2786 Cmu-Chr10:34455541 4.80E-86 dispersed
Cmu10g2501 Cmu-Chr10:31663773 Cmu10g1924 Cmu-Chr10:24654674 1.70E-70 dispersed
Cmu11g1831 Cmu-Chr11:30481069 Cmu10g1924 Cmu-Chr10:24654674 2.70E-66 dispersed
Cmu10g1924 Cmu-Chr10:24654674 Cmu03g2151 Cmu-Chr3:29986813 1.30E-104 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75844 PF00069 Pkinase 7.30E-44 CL0016 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu10g1924 - - - 0.0