Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu10g2050 ATGGAGAAGAAGACTTATCCGATTGGTGAAGATTATTATATTCTGTATGAGGAGGTCGGGCAGGGTGTGAGCGCTTCAGTTCACCGTGCTCTTTGTAAACCTCTTAACGAGATCGTCGCCATTAAGATTCTCGATTTTGAGCGTGAGAATTGTGATCTGGCTAGCATTTATCGTGAAGTACAGACAATGATCTTGGTTGACCACCCCAATGTCCTTAAATCACACTGCTCTTTTGTCAATGGCCATGATTTGTGGATTGTTATGCCCTACATGTCTGGAGGTTCATGTCTTCACATATTGAAGGCTGCATATCCTGATGGTTTCGAGGAAGTGGTCATAGCAACAGTTTTGCGAGAAGTATTGAAGGGGGTTGAATATCTTCATAATCATGGACATATACATCGGGATATCAAAGCAGGGAATATTCTTATTGATTCACGTGGTGCAATCAAGCTAGGGGATTTTGGTGTTTCGGCTTGTCTTTTTGATTCAGGTGATCGACAACGTGTGAGGAATACATTCGTGGGGACACCTTGCTGGATGGCACCTGAGGTTATGGAGCAATTAAATGGTTATGACTTCAAGGCTGACATCTGGTCTTTTGCCATAACTGGGTTAGAGCTTGCCCATGGCCATGCTCCTTTCTCAAAATATCCTCCGATGAAGGTACTGATGATGACCTTGCAAAACGCACCTCCAGGGCTTGATTATGAGAGGGATAAAAAATTCTCAAAGTCTTTTAAGCAGATGATTGCTAGTTGCTTGGTAAAAGATCCTTCAAAACGGCCTTCTGCAAGTAAGCTGCTAAAGCATTCATTTTTTAGGCAAGCCCGATCAAATGATTACATTGCACGCACCCTTTTGGAAGGGCTACCTGTTCTTGGTGATCGTATAAAGGCACTCAAGAGAAAAGAAGAAGATATGCTAGCACAAAAGAAAATGCCAGATGGAAAGAAGGAAGAATTATCTCAGAATGAATATAAACGAGGCATCAGTGGATGGAACTTCAATCTTGATGATTTAAAGGCTCAGGCATCTCTGATTCAGGAATTTGAAGAGTCAATAAGTGAAATCAGTGAAGTAGGGAGCTCAAATTCCTTATGTGCACTTGATGTGCAAGAAAAGAAATTACAAGGCCAAAATTCTTCAGAAATTTCAGATAATGAAGAGAATGGCATGCTGCGGAGACAACCCTCCATGAAAGCAAATGACACAGTAGAGGGTAAAAATTCTATCAATGAATCAACAATTATTGGTTCTTCCTCTCAACATTATTCTTCACCCATTGAGAATGGCTCCAGTGAGGAGTTTCGTTTGGAGAGCAGCAAAAGAATTTTGGGGAATACTCCTAATTCTAGCCAACATAAAAGAAGTATTTCTTCTAATACCGCTATTCAACAAGAAATCAGTTCACCACTGAACAGAAGAGAGAGTTATGAGACAGAAAAGAATGGTGCAAATGGCAGTATTGCAATTGGAATGACTTCTCAGGCGGTAGATGATGTACTTTCTGATTCTCATTCTAAAGATCCCAAGTCATCATTAAGTCCAGCAACAAATGACGAGGAACAGGATGAGAAAGCAAAGGCACCAGTTATTCAGCAGAAAGGGCGTTTCAAAGTTACCTCGGAGAGTGTTGATGTAGAAAAGGCAGCTGCATCCCCTATTTTGCAAAAAAGTCACAGCATGCAGGTGATTACCTCAAATTCTGCTACTCCTCTACCTTCTAATCTACCAACTCCTCTACTGACACCTCTACCTTCATCTGATGCTATACCAATTAATACTAGATCTTCTATGTTTCCAGTGTTGCACTCTGTTTTGCAGACAAATATTGTTCAAAGGGATGATATTTTGACTCTAATGAGGCAAATCGCAATCGGAGAATTTTCAGCTGATGGCGTAGTTGATGTCTCAGTGGCCCATATAACAGCAACGGAAAAATCTTTGCTTGAAGCAGCTCATGAAAGGGAGAAGGATTTACTTAACGAAGTAACTGAGTTACAGTGGAGGATATTACGAGCGAGAGATGAAATCCAAAGATTAAAATTAAACAATGCAGAGTTGAATTATGAAGTAGTGTCATTAGTGGAGAAAAAGCTTCCTCTCGTCTCGTCCTTGAATCATGTGGAGACTGCAAACCATCTGATATGGAGGTTGGAGTTATTAAGACCATTGGCATTGGATTTTTGA 2193 40.72 MEKKTYPIGEDYYILYEEVGQGVSASVHRALCKPLNEIVAIKILDFERENCDLASIYREVQTMILVDHPNVLKSHCSFVNGHDLWIVMPYMSGGSCLHILKAAYPDGFEEVVIATVLREVLKGVEYLHNHGHIHRDIKAGNILIDSRGAIKLGDFGVSACLFDSGDRQRVRNTFVGTPCWMAPEVMEQLNGYDFKADIWSFAITGLELAHGHAPFSKYPPMKVLMMTLQNAPPGLDYERDKKFSKSFKQMIASCLVKDPSKRPSASKLLKHSFFRQARSNDYIARTLLEGLPVLGDRIKALKRKEEDMLAQKKMPDGKKEELSQNEYKRGISGWNFNLDDLKAQASLIQEFEESISEISEVGSSNSLCALDVQEKKLQGQNSSEISDNEENGMLRRQPSMKANDTVEGKNSINESTIIGSSSQHYSSPIENGSSEEFRLESSKRILGNTPNSSQHKRSISSNTAIQQEISSPLNRRESYETEKNGANGSIAIGMTSQAVDDVLSDSHSKDPKSSLSPATNDEEQDEKAKAPVIQQKGRFKVTSESVDVEKAAASPILQKSHSMQVITSNSATPLPSNLPTPLLTPLPSSDAIPINTRSSMFPVLHSVLQTNIVQRDDILTLMRQIAIGEFSADGVVDVSVAHITATEKSLLEAAHEREKDLLNEVTELQWRILRARDEIQRLKLNNAELNYEVVSLVEKKLPLVSSLNHVETANHLIWRLELLRPLALDF 730
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 26273580 26283598 + CmPI595203_10g020500.1 Cmu10g2050 427580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu10g2050 730 FunFam Serine/threonine-protein kinase BLUS1 2 90 - -
Cmu10g2050 730 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524(InterPro)
Cmu10g2050 730 MobiDBLite consensus disorder prediction 403 435 - -
Cmu10g2050 730 MobiDBLite consensus disorder prediction 377 530 - -
Cmu10g2050 730 ProSiteProfiles Protein kinase domain profile. 13 274 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu10g2050 730 Coils Coil 651 699 - -
Cmu10g2050 730 MobiDBLite consensus disorder prediction 444 474 - -
Cmu10g2050 730 SMART serkin_6 13 274 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu10g2050 730 Pfam Protein kinase domain 15 274 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu10g2050 730 Gene3D Transferase(Phosphotransferase) domain 1 94 327 - -
Cmu10g2050 730 SUPERFAMILY Protein kinase-like (PK-like) 11 275 IPR011009 -
Cmu10g2050 730 Gene3D Phosphorylase Kinase; domain 1 2 89 - -
Cmu10g2050 730 CDD STKc_OSR1_SPAK 11 274 - -
Cmu10g2050 730 FunFam serine/threonine-protein kinase BLUS1 isoform X1 94 327 - -
Cmu10g2050 730 MobiDBLite consensus disorder prediction 483 502 - -
Cmu10g2050 730 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 1 689 IPR047173 GO:0043539(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu09g1829 Cmu-Chr9:34456048 Cmu10g2050 Cmu-Chr10:26273580 3.20E-163 dispersed
Cmu10g0933 Cmu-Chr10:1313012 Cmu10g2050 Cmu-Chr10:26273580 1.30E-141 dispersed
Cmu10g2050 Cmu-Chr10:26273580 Cmu11g1784 Cmu-Chr11:29931536 1.30E-56 dispersed
Cmu10g2050 Cmu-Chr10:26273580 Cmu05g0488 Cmu-Chr5:4108463 3.40E-86 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75850 PF00069 Pkinase 4.50E-59 CL0016 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu10g2050 K08835 - csv:101211076 1211.05