Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu10g2050 ATGGAGAAGAAGACTTATCCGATTGGTGAAGATTATTATATTCTGTATGAGGAGGTCGGGCAGGGTGTGAGCGCTTCAGTTCACCGTGCTCTTTGTAAACCTCTTAACGAGATCGTCGCCATTAAGATTCTCGATTTTGAGCGTGAGAATTGTGATCTGGCTAGCATTTATCGTGAAGTACAGACAATGATCTTGGTTGACCACCCCAATGTCCTTAAATCACACTGCTCTTTTGTCAATGGCCATGATTTGTGGATTGTTATGCCCTACATGTCTGGAGGTTCATGTCTTCACATATTGAAGGCTGCATATCCTGATGGTTTCGAGGAAGTGGTCATAGCAACAGTTTTGCGAGAAGTATTGAAGGGGGTTGAATATCTTCATAATCATGGACATATACATCGGGATATCAAAGCAGGGAATATTCTTATTGATTCACGTGGTGCAATCAAGCTAGGGGATTTTGGTGTTTCGGCTTGTCTTTTTGATTCAGGTGATCGACAACGTGTGAGGAATACATTCGTGGGGACACCTTGCTGGATGGCACCTGAGGTTATGGAGCAATTAAATGGTTATGACTTCAAGGCTGACATCTGGTCTTTTGCCATAACTGGGTTAGAGCTTGCCCATGGCCATGCTCCTTTCTCAAAATATCCTCCGATGAAGGTACTGATGATGACCTTGCAAAACGCACCTCCAGGGCTTGATTATGAGAGGGATAAAAAATTCTCAAAGTCTTTTAAGCAGATGATTGCTAGTTGCTTGGTAAAAGATCCTTCAAAACGGCCTTCTGCAAGTAAGCTGCTAAAGCATTCATTTTTTAGGCAAGCCCGATCAAATGATTACATTGCACGCACCCTTTTGGAAGGGCTACCTGTTCTTGGTGATCGTATAAAGGCACTCAAGAGAAAAGAAGAAGATATGCTAGCACAAAAGAAAATGCCAGATGGAAAGAAGGAAGAATTATCTCAGAATGAATATAAACGAGGCATCAGTGGATGGAACTTCAATCTTGATGATTTAAAGGCTCAGGCATCTCTGATTCAGGAATTTGAAGAGTCAATAAGTGAAATCAGTGAAGTAGGGAGCTCAAATTCCTTATGTGCACTTGATGTGCAAGAAAAGAAATTACAAGGCCAAAATTCTTCAGAAATTTCAGATAATGAAGAGAATGGCATGCTGCGGAGACAACCCTCCATGAAAGCAAATGACACAGTAGAGGGTAAAAATTCTATCAATGAATCAACAATTATTGGTTCTTCCTCTCAACATTATTCTTCACCCATTGAGAATGGCTCCAGTGAGGAGTTTCGTTTGGAGAGCAGCAAAAGAATTTTGGGGAATACTCCTAATTCTAGCCAACATAAAAGAAGTATTTCTTCTAATACCGCTATTCAACAAGAAATCAGTTCACCACTGAACAGAAGAGAGAGTTATGAGACAGAAAAGAATGGTGCAAATGGCAGTATTGCAATTGGAATGACTTCTCAGGCGGTAGATGATGTACTTTCTGATTCTCATTCTAAAGATCCCAAGTCATCATTAAGTCCAGCAACAAATGACGAGGAACAGGATGAGAAAGCAAAGGCACCAGTTATTCAGCAGAAAGGGCGTTTCAAAGTTACCTCGGAGAGTGTTGATGTAGAAAAGGCAGCTGCATCCCCTATTTTGCAAAAAAGTCACAGCATGCAGGTGATTACCTCAAATTCTGCTACTCCTCTACCTTCTAATCTACCAACTCCTCTACTGACACCTCTACCTTCATCTGATGCTATACCAATTAATACTAGATCTTCTATGTTTCCAGTGTTGCACTCTGTTTTGCAGACAAATATTGTTCAAAGGGATGATATTTTGACTCTAATGAGGCAAATCGCAATCGGAGAATTTTCAGCTGATGGCGTAGTTGATGTCTCAGTGGCCCATATAACAGCAACGGAAAAATCTTTGCTTGAAGCAGCTCATGAAAGGGAGAAGGATTTACTTAACGAAGTAACTGAGTTACAGTGGAGGATATTACGAGCGAGAGATGAAATCCAAAGATTAAAATTAAACAATGCAGAGTTGAATTATGAAGTAGTGTCATTAGTGGAGAAAAAGCTTCCTCTCGTCTCGTCCTTGAATCATGTGGAGACTGCAAACCATCTGATATGGAGGTTGGAGTTATTAAGACCATTGGCATTGGATTTTTGA 2193 40.72 MEKKTYPIGEDYYILYEEVGQGVSASVHRALCKPLNEIVAIKILDFERENCDLASIYREVQTMILVDHPNVLKSHCSFVNGHDLWIVMPYMSGGSCLHILKAAYPDGFEEVVIATVLREVLKGVEYLHNHGHIHRDIKAGNILIDSRGAIKLGDFGVSACLFDSGDRQRVRNTFVGTPCWMAPEVMEQLNGYDFKADIWSFAITGLELAHGHAPFSKYPPMKVLMMTLQNAPPGLDYERDKKFSKSFKQMIASCLVKDPSKRPSASKLLKHSFFRQARSNDYIARTLLEGLPVLGDRIKALKRKEEDMLAQKKMPDGKKEELSQNEYKRGISGWNFNLDDLKAQASLIQEFEESISEISEVGSSNSLCALDVQEKKLQGQNSSEISDNEENGMLRRQPSMKANDTVEGKNSINESTIIGSSSQHYSSPIENGSSEEFRLESSKRILGNTPNSSQHKRSISSNTAIQQEISSPLNRRESYETEKNGANGSIAIGMTSQAVDDVLSDSHSKDPKSSLSPATNDEEQDEKAKAPVIQQKGRFKVTSESVDVEKAAASPILQKSHSMQVITSNSATPLPSNLPTPLLTPLPSSDAIPINTRSSMFPVLHSVLQTNIVQRDDILTLMRQIAIGEFSADGVVDVSVAHITATEKSLLEAAHEREKDLLNEVTELQWRILRARDEIQRLKLNNAELNYEVVSLVEKKLPLVSSLNHVETANHLIWRLELLRPLALDF 730
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 26273580 26283598 + CmPI595203_10g020500.1 Cmu10g2050 427580

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cmu10g2050 730 FunFam Serine/threonine-protein kinase BLUS1 2 90 - -
Cmu10g2050 730 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524(InterPro)
Cmu10g2050 730 MobiDBLite consensus disorder prediction 403 435 - -
Cmu10g2050 730 MobiDBLite consensus disorder prediction 377 530 - -
Cmu10g2050 730 ProSiteProfiles Protein kinase domain profile. 13 274 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu10g2050 730 Coils Coil 651 699 - -
Cmu10g2050 730 MobiDBLite consensus disorder prediction 444 474 - -
Cmu10g2050 730 SMART serkin_6 13 274 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu10g2050 730 Pfam Protein kinase domain 15 274 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu10g2050 730 Gene3D Transferase(Phosphotransferase) domain 1 94 327 - -
Cmu10g2050 730 SUPERFAMILY Protein kinase-like (PK-like) 11 275 IPR011009 -
Cmu10g2050 730 Gene3D Phosphorylase Kinase; domain 1 2 89 - -
Cmu10g2050 730 CDD STKc_OSR1_SPAK 11 274 - -
Cmu10g2050 730 FunFam serine/threonine-protein kinase BLUS1 isoform X1 94 327 - -
Cmu10g2050 730 MobiDBLite consensus disorder prediction 483 502 - -
Cmu10g2050 730 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 1 689 IPR047173 GO:0043539(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu10g2050 K08835 - - csv:101211076 1211.05
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu09g1829 Cmu-Chr9:34456048 Cmu10g2050 Cmu-Chr10:26273580 3.20E-163 dispersed
Cmu10g0933 Cmu-Chr10:1313012 Cmu10g2050 Cmu-Chr10:26273580 1.30E-141 dispersed
Cmu10g2050 Cmu-Chr10:26273580 Cmu11g1784 Cmu-Chr11:29931536 1.30E-56 dispersed
Cmu10g2050 Cmu-Chr10:26273580 Cmu05g0488 Cmu-Chr5:4108463 3.40E-86 transposed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cmu11g1784 . 69 756 MAP Kinase Kinase Kinase Kinase AT1G53165 63.7 3.0e-225 778.5
Cmu11g1171 . 254 514 MAP Kinase Kinase Kinase Kinase AT1G53165 53.1 7.5e-67 252.3
Cmu07g0714 . 270 522 MAP Kinase Kinase Kinase Kinase AT1G53165 53.5 2.4e-65 247.3
Cmu11g1784 . 69 753 MAP Kinase Kinase Kinase Kinase AT3G15220 65.9 3.7e-231 798.1
Cmu11g1171 . 254 514 MAP Kinase Kinase Kinase Kinase AT3G15220 51.5 3.4e-67 253.4
Cmu07g0714 . 270 522 MAP Kinase Kinase Kinase Kinase AT3G15220 52.0 1.4e-65 248.1
Cmu11g1171 . 4 826 MAP Kinase Kinase Kinase Kinase AT1G69220 58.7 1.2e-241 833.2
Cmu07g0714 . 4 522 MAP Kinase Kinase Kinase Kinase AT1G69220 61.1 1.4e-152 537.3
Cmu07g0712 . 46 364 MAP Kinase Kinase Kinase Kinase AT1G69220 53.2 2.2e-81 300.8
Cmu09g1829 . 1 668 MAP Kinase Kinase Kinase Kinase AT5G14720 66.2 5.7e-253 870.5
Cmu05g0488 . 32 385 MAP Kinase Kinase Kinase Kinase AT5G14720 51.3 1.5e-96 350.9
Cmu10g0933 . 7 721 MAP Kinase Kinase Kinase Kinase AT4G24100 65.0 5.9e-248 854.0
Cmu10g0933 . 11 722 MAP Kinase Kinase Kinase Kinase AT4G10730 64.8 2.8e-247 851.7
Cmu10g2050 . 4 478 MAP Kinase Kinase Kinase Kinase AT1G70430 51.9 1.5e-132 470.3
Cmu10g0933 . 5 369 MAP Kinase Kinase Kinase Kinase AT1G70430 56.8 4.8e-118 422.2
Cmu10g2050 . 1 671 MAP Kinase Kinase Kinase Kinase AT1G79640 59.9 1.1e-216 750.0
Cmu09g1829 . 1 328 MAP Kinase Kinase Kinase Kinase AT1G23700 59.2 2.7e-103 372.9
Cmu10g2050 . 8 324 MAP Kinase Kinase Kinase Kinase AT1G23700 53.1 2.1e-87 320.1
Cmu10g0933 . 15 306 MAP Kinase Kinase Kinase Kinase AT1G23700 50.8 2.4e-75 280.0
Cmu05g0488 . 32 499 MAP Kinase Kinase Kinase Kinase AT4G14480 59.0 2.7e-143 505.8
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002203 1 4 3 2 3 1 2 1 1 2 1 1 3 2 2 3 2 5 2 1 2 2 2 2 1 1 2 4 2 2 62
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75850 PF00069 Pkinase 4.50E-59 CL0016 Cmu PK