Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu10g2053 ATGGCGGATCTCAAAGAGCGGTTGCTTCCACCGAAACCTGCTTCTGCTGTTAATCTTAGGGAGGCAATTAATAATCGACCATCAGCCTCTGGCAGGGTACCTTTTCAAGGTGTGGATGTTCTAGGGCTGAAGAAGCGAGGGCAGGGACTTAGATCTTGGATCCGGGTAGATTCCTCTGGGAACTCCCAGATTATTGAGGTTGATAAGTTCACCATGATGCGTCGTTGTGATCTACCTGCACGTGATTTGCGGTTGCTTGATCCTTTGTTTGTTTACCCTTCAACAATTCTTGGTAGAGAGAAGGCTATTGTAGTCAATCTAGAGCAGATTCGATGTATTATAACAGCTGATGAAGTTTTGCTGTTAAATTCCCTTGATAGTTATGTACTGCAGTATGTGGTAGAGCTACAAAGGCGATTGAAGACTACTGGGGTTGATGAGGTTTGGCAGAATGATGCAAATCATGGTGCTGACTTAAACCGAAGAAGGGGAAGTAGGAATTTTGATAATGTATTTGGAAACACCTCTCCTGATTATTTGCCCTTTGAGTTTAGAGCTTTAGAAGTTGCTTTGGAAGCAGCATGTACATTTCTTGATTCCCAGGCTGCAGAATTAGAAATCGAAGCATACCCATTGCTAGACGAACTTACGTCAAAAATCAGTACATTAAATTTGGAGCGGGTCCGTCGCTTGAAAAGCAGACTTGTTGCCCTGACTCGTAGGGTTCAGAAGGTTAGGGATGAAATAGAGCAGCTCATGGATGATGATGGAGATATGGCAGAAATGTACCTCACCGAGAAGAAAATGAGAATGGAGTCCTTTGTTTATGGTGATCAGTCTGTGAGTGGATACAGATCAATTGATGGAGCGTCTATTTCTGCTCCTGTTTCTCCTGTATCATCTCCACCCGAAACTCGCAGGCTTGAGAAGAGCCTGAGCATTGCCAGGAGCCGGCATGAGAGCATGAGAAGTTCAGAAAGTACCACTGAAAATATAGAGGAGCTCGAGATGCTTCTTGAAGCATATTTTGTTGTCATTGATAGCACCCTGAATAAGTTGACATCGTTGAAAGAATACATTGATGACACAGAAGATTTCATCAACATCCAGTTGGATAATGTACGTAATCAGTTGATTCAGTTTGAGCTACTGCTGACTACCGCAACATTTGTTGTTGCCATTTTTGGGGTGGTAGCTGGAATTTTTGGCATGAATTTTGAAATACCAATGTTTGGGGATCCCGATGCATTCAAATGGGTTCTTCTAATTACAGGAGTAAGTGGAATTGTCATATTTTCTGCATTTGTTTGGTTTTTCAGATACAAAAGGCTGATGCCACTTTAA 1344 42.49 MADLKERLLPPKPASAVNLREAINNRPSASGRVPFQGVDVLGLKKRGQGLRSWIRVDSSGNSQIIEVDKFTMMRRCDLPARDLRLLDPLFVYPSTILGREKAIVVNLEQIRCIITADEVLLLNSLDSYVLQYVVELQRRLKTTGVDEVWQNDANHGADLNRRRGSRNFDNVFGNTSPDYLPFEFRALEVALEAACTFLDSQAAELEIEAYPLLDELTSKISTLNLERVRRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKMRMESFVYGDQSVSGYRSIDGASISAPVSPVSSPPETRRLEKSLSIARSRHESMRSSESTTENIEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLDNVRNQLIQFELLLTTATFVVAIFGVVAGIFGMNFEIPMFGDPDAFKWVLLITGVSGIVIFSAFVWFFRYKRLMPL 447
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 26325819 26329032 + CmPI595203_10g020530.1 Cmu10g2053 427583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu10g2053 447 CDD Mrs2_Mfm1p-like 53 444 IPR039204 -
Cmu10g2053 447 FunFam Magnesium transporter MRS2-1 41 124 - -
Cmu10g2053 447 Pfam Magnesium transporter MRS2-like 326 375 - -
Cmu10g2053 447 Pfam Magnesium transporter MRS2-like 57 270 - -
Cmu10g2053 447 Gene3D Magnesium transport protein CorA, transmembrane region 125 378 - -
Cmu10g2053 447 Gene3D - 41 124 - -
Cmu10g2053 447 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 384 437 IPR045863 -
Cmu10g2053 447 Coils Coil 228 255 - -
Cmu10g2053 447 Gene3D Magnesium transport protein CorA, transmembrane region 385 445 - -
Cmu10g2053 447 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 35 444 IPR039204 GO:0015095(PANTHER)|GO:0015693(PANTHER)
Cmu10g2053 447 FunFam Magnesium transporter MRS2-1 385 445 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g0734 Cmu-Chr2:7715367 Cmu10g2053 Cmu-Chr10:26325819 7.70E-90 dispersed
Cmu06g0647 Cmu-Chr6:7360798 Cmu10g2053 Cmu-Chr10:26325819 4.00E-89 dispersed
Cmu08g0986 Cmu-Chr8:22116828 Cmu10g2053 Cmu-Chr10:26325819 1.60E-106 dispersed
Cmu10g2053 Cmu-Chr10:26325819 Cmu07g0122 Cmu-Chr7:1073170 3.00E-85 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu10g2053 K16075 - csv:101217419 825.083