Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu10g2062 ATGCCGATCGATACCTCTGCAGTTTCCGGCCAAATTGTTTGTGTCACCGGCGCCGGAGGCTTCATTGCTTCATGGCTTGTAAAGCTTCTTCTTGAGAAGGGCTACACTGTCAGAGGAACCGTTAGAAACCCAGATGACCAAAAGAATGCTCATTTGAACAACTTAGAAGGAGCTAAAGAGCGGTTGTCCTTGTTTAGTGCTGATCTTCTTGATTTTGACAGTCTCAAAGCAGCTATTATGGGTTGCCATGGTGTTTTCCACACCGCGTCTCCGGTGACCGATGATCCCGAAAAGGTGGAACAGGCCATAATTGGAACAAAGAATGTCATGACCGCGGCTGCTGAAGCAAATGTTCGACGAGTGGTGTTCACGTCGTCGATCGGCTCTGTCTACATGAACCCTAACCGAAGCCCCGACGTGGTGGTGGATGAGTCTTGTTGGAGTGACCTTGAGTTTTGCAAGAACACCAAGAATTGGTATTGTTATGCAAAGACAGTGGCAGAACAAGCAGCATGGGAAGTGGCAAAAGAAAAAGGGGTGGATCTTGTGGTCGTAAATCCAATGTTGGTATTGGGGCCTTTGTTGCAAGAAAGTGTGAATGCAAGTGTGGTTCATATAATGAAATATTTAACAGGATCAGCAAAAACATATGTAAATGCAGTTCAAGGTTATGTTGATGTCAAGGATGTTGCAAAAGCCCATGTTTTGGTTTATGAAACTCCTTCCGCTTCAGGAAGATATATTTGTGTTGAGAGTATGCTTCATCGTGGAGAATTGGTTGATATTCTTGCAAGCTTGTTCCCTCAATATCCTCTCCCTACCAAGTAA 828 44.81 MPIDTSAVSGQIVCVTGAGGFIASWLVKLLLEKGYTVRGTVRNPDDQKNAHLNNLEGAKERLSLFSADLLDFDSLKAAIMGCHGVFHTASPVTDDPEKVEQAIIGTKNVMTAAAEANVRRVVFTSSIGSVYMNPNRSPDVVVDESCWSDLEFCKNTKNWYCYAKTVAEQAAWEVAKEKGVDLVVVNPMLVLGPLLQESVNASVVHIMKYLTGSAKTYVNAVQGYVDVKDVAKAHVLVYETPSASGRYICVESMLHRGELVDILASLFPQYPLPTK 275
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 26490287 26491482 - CmPI595203_10g020620.1 Cmu10g2062 427592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu10g2062 275 Gene3D - 3 275 - -
Cmu10g2062 275 FunFam Cinnamoyl-CoA reductase 1 6 275 - -
Cmu10g2062 275 Pfam NAD dependent epimerase/dehydratase family 13 244 IPR001509 -
Cmu10g2062 275 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 12 268 IPR050425 GO:0016616(PANTHER)
Cmu10g2062 275 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 273 IPR036291 -
Cmu10g2062 275 CDD FR_SDR_e 13 275 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu10g2062 Cmu-Chr10:26490287 Cmu10g2064 Cmu-Chr10:26503770 1.30E-150 dispersed
Cmu10g2062 Cmu-Chr10:26490287 Cmu10g2063 Cmu-Chr10:26494443 1.70E-147 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu10g2062 K09753 - csv:116401668 516.538