Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu10g2063 | ATGCTGATCGATACCTCTGCAATTTCCGGCGAAATTGTGTGTGTCACCGGCGCCGGAGGCTTCATTGCTTCATGGCTCCTGAAGCTTCTTCTTGAGAAGGGCTACACTGTTAGAGGAACCGTTAGAAACCCAGATGATCAAAAGAATGCTCATTTGAAGAACTTAGAAGGAGCTAAAGAGAGATTGTCTTTGTTTAGTGCTGATCTCCTTGATTTTGACAGCCTTAAAGCAGCCATTTTGGGCTGTCATGGTGTTTTCCACACCGCGTCTCCTGTGACCGATGACCATGACAAAGTGGAACAAGCCATAATTGGAACAAAGAACGTCATGACTGCTGCCGCTGAAGCAAACGTTCAACGTGTGGTCTTCACGTCGTCGATCGGGACCGTTTATATGAACCCTAACCGACACCCAGACACGGTGGTGGATGAGTCTTGTTGGAGTGACCTTGAGTTTTGCAAGAACACCAAGAATTGGTACTGCTATGCAAAGACAATGGCAGAACAAGCAGCATGGGAAGTGGCAAAAGAAAGAGGAGTTGATCTTGTAGTTGTAAATCCAATGTTGGTGTTGGGACCTTTGTTGCAAGAAGGTGTGAATGCTAGTGTAGTTCACATAATGAAGTACTTAACGGGATCAGCAAAGACATATGTAAATGCAGTTCAAGGTTATGTTGATGTTAAAGATGTTGCAAAAGCCCATATTTTGGTTTATGAAACTCCTTCTGCTTCAGGAAGATATATTTGTGTTGAGAGTATGCTTCATCGTGGAGAATTGGTTGATATTCTTAAAAACTTCTTCCCTCAATATCCTCTTCCTACCAAGTGTTCTGATGAGATAAATCCCAGAAAGAAACCTTACAAATACACAGTTGAGAAGCTAAAGTCATTAGGAATGGAATTCACACCAATCAAGCAATGCATATATGAAACTGTAAAGAGCCTACAAGACAAGGGTCATCTTCTACTTCCTTCCCAACTTCAACATTGA | 990 | 42.42 | MLIDTSAISGEIVCVTGAGGFIASWLLKLLLEKGYTVRGTVRNPDDQKNAHLKNLEGAKERLSLFSADLLDFDSLKAAILGCHGVFHTASPVTDDHDKVEQAIIGTKNVMTAAAEANVQRVVFTSSIGTVYMNPNRHPDTVVDESCWSDLEFCKNTKNWYCYAKTMAEQAAWEVAKERGVDLVVVNPMLVLGPLLQEGVNASVVHIMKYLTGSAKTYVNAVQGYVDVKDVAKAHILVYETPSASGRYICVESMLHRGELVDILKNFFPQYPLPTKCSDEINPRKKPYKYTVEKLKSLGMEFTPIKQCIYETVKSLQDKGHLLLPSQLQH | 329 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 26494443 | 26501538 | - | CmPI595203_10g020630.1 | Cmu10g2063 | 427593 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu10g2063 | 329 | PANTHER | NAD DEPENDENT EPIMERASE/DEHYDRATASE | 13 | 314 | IPR050425 | GO:0016616(PANTHER) | |
Cmu10g2063 | 329 | FunFam | Cinnamoyl-CoA reductase 1 | 4 | 329 | - | - | |
Cmu10g2063 | 329 | Pfam | NAD dependent epimerase/dehydratase family | 13 | 244 | IPR001509 | - | |
Cmu10g2063 | 329 | CDD | FR_SDR_e | 13 | 298 | - | - | |
Cmu10g2063 | 329 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 7 | 315 | IPR036291 | - | |
Cmu10g2063 | 329 | Gene3D | - | 3 | 329 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu10g1567 | Cmu-Chr10:11584086 | Cmu10g2063 | Cmu-Chr10:26494443 | 5.90E-62 | dispersed | |
Cmu10g2063 | Cmu-Chr10:26494443 | Cmu10g2065 | Cmu-Chr10:26516711 | 4.10E-156 | dispersed | |
Cmu10g2062 | Cmu-Chr10:26490287 | Cmu10g2063 | Cmu-Chr10:26494443 | 1.70E-147 | tandem | |
Cmu10g2063 | Cmu-Chr10:26494443 | Cmu10g2064 | Cmu-Chr10:26503770 | 1.00E-175 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu10g2063 | K09753 | - | csv:116401652 | 614.379 |