Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu10g2063 ATGCTGATCGATACCTCTGCAATTTCCGGCGAAATTGTGTGTGTCACCGGCGCCGGAGGCTTCATTGCTTCATGGCTCCTGAAGCTTCTTCTTGAGAAGGGCTACACTGTTAGAGGAACCGTTAGAAACCCAGATGATCAAAAGAATGCTCATTTGAAGAACTTAGAAGGAGCTAAAGAGAGATTGTCTTTGTTTAGTGCTGATCTCCTTGATTTTGACAGCCTTAAAGCAGCCATTTTGGGCTGTCATGGTGTTTTCCACACCGCGTCTCCTGTGACCGATGACCATGACAAAGTGGAACAAGCCATAATTGGAACAAAGAACGTCATGACTGCTGCCGCTGAAGCAAACGTTCAACGTGTGGTCTTCACGTCGTCGATCGGGACCGTTTATATGAACCCTAACCGACACCCAGACACGGTGGTGGATGAGTCTTGTTGGAGTGACCTTGAGTTTTGCAAGAACACCAAGAATTGGTACTGCTATGCAAAGACAATGGCAGAACAAGCAGCATGGGAAGTGGCAAAAGAAAGAGGAGTTGATCTTGTAGTTGTAAATCCAATGTTGGTGTTGGGACCTTTGTTGCAAGAAGGTGTGAATGCTAGTGTAGTTCACATAATGAAGTACTTAACGGGATCAGCAAAGACATATGTAAATGCAGTTCAAGGTTATGTTGATGTTAAAGATGTTGCAAAAGCCCATATTTTGGTTTATGAAACTCCTTCTGCTTCAGGAAGATATATTTGTGTTGAGAGTATGCTTCATCGTGGAGAATTGGTTGATATTCTTAAAAACTTCTTCCCTCAATATCCTCTTCCTACCAAGTGTTCTGATGAGATAAATCCCAGAAAGAAACCTTACAAATACACAGTTGAGAAGCTAAAGTCATTAGGAATGGAATTCACACCAATCAAGCAATGCATATATGAAACTGTAAAGAGCCTACAAGACAAGGGTCATCTTCTACTTCCTTCCCAACTTCAACATTGA 990 42.42 MLIDTSAISGEIVCVTGAGGFIASWLLKLLLEKGYTVRGTVRNPDDQKNAHLKNLEGAKERLSLFSADLLDFDSLKAAILGCHGVFHTASPVTDDHDKVEQAIIGTKNVMTAAAEANVQRVVFTSSIGTVYMNPNRHPDTVVDESCWSDLEFCKNTKNWYCYAKTMAEQAAWEVAKERGVDLVVVNPMLVLGPLLQEGVNASVVHIMKYLTGSAKTYVNAVQGYVDVKDVAKAHILVYETPSASGRYICVESMLHRGELVDILKNFFPQYPLPTKCSDEINPRKKPYKYTVEKLKSLGMEFTPIKQCIYETVKSLQDKGHLLLPSQLQH 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 26494443 26501538 - CmPI595203_10g020630.1 Cmu10g2063 427593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu10g2063 329 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 13 314 IPR050425 GO:0016616(PANTHER)
Cmu10g2063 329 FunFam Cinnamoyl-CoA reductase 1 4 329 - -
Cmu10g2063 329 Pfam NAD dependent epimerase/dehydratase family 13 244 IPR001509 -
Cmu10g2063 329 CDD FR_SDR_e 13 298 - -
Cmu10g2063 329 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 315 IPR036291 -
Cmu10g2063 329 Gene3D - 3 329 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu10g1567 Cmu-Chr10:11584086 Cmu10g2063 Cmu-Chr10:26494443 5.90E-62 dispersed
Cmu10g2063 Cmu-Chr10:26494443 Cmu10g2065 Cmu-Chr10:26516711 4.10E-156 dispersed
Cmu10g2062 Cmu-Chr10:26490287 Cmu10g2063 Cmu-Chr10:26494443 1.70E-147 tandem
Cmu10g2063 Cmu-Chr10:26494443 Cmu10g2064 Cmu-Chr10:26503770 1.00E-175 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu10g2063 K09753 - csv:116401652 614.379