Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu10g2064 ATGCCGATTGATACCTCTGCAGTCTCCGGCCAAATTGTGTGTGTCACCGGCGCCGGCGGCTTCATTGCTTCATGGCTTGTAAAGCTTCTTCTTGAGAAGGGCTACACCGTCAGAGGAACCGTTAGAAACCCAGATGACCAAAAGAATGCTCATTTGAAGAACTTAGAAGGAGCTAAAGAGAGATTGTCTTTGTTTAGTGCTGATCTCCTTGATTTTGACAGCCTCAAAGCAGCCATTATGGGTTGTCATGGTGTTTTCCACACTGCGTCTCCGGTGACCGATGATCCCGAAAAGGTGGAACAGGCCATAATCGGAACAAAGAACGTCATGACCGCTGCCGCTGAAGCAAACGTCCGACGAGTGGTGTTCACGTCATCGATCGGCACCGTCTATATGAACCCTAACCGAAGCCCCGACGCGGTAGTGGATGAGTCTTGTTGGAGTGACCTTGAGTTTTGCAAGAACACCAAGAATTGGTATTGCTATGCAAAGACAGTGGCAGAACAAACAGCATGGGAAGTGGCAAAAGAAAAAGAAGTGGATCTTGTTGTGGTGAATCCAATGTTGGTATTGGGGCCTTTGTTGCAAGAAGGTGTGAATGCAAGTGTAGTTCATATAATGAAATATTTGACCGGATCAGTAAAGACATATGTAAATGCAGTTCAAGGATATGTTGATGTTAAGGATGTTGCAAAAGCACATGTTTTGGTTTATGAAACTCCTTCAGCTTCAGGCAGATATATTTGTGTTGAGAGTATGCTTCATCGTGGAGAATTGGTTGATATCCTTGCAAACCTCTTTCCTGAATATTCTGTTCCCACTAAGTGCTCTGATGAGGTGAATCCCAAGAAGAAACCTTACAAATACACAGTTGCGAAGTTAAAGTCATTGGGAATGGAATTCACACCGATCAAACAATGCATATATGAAACTGTGAAGAGCTTGCAAGAGAAGGGTCATCTTCCACTTCCCTCCAAACTTCAACGCTGA 990 44.44 MPIDTSAVSGQIVCVTGAGGFIASWLVKLLLEKGYTVRGTVRNPDDQKNAHLKNLEGAKERLSLFSADLLDFDSLKAAIMGCHGVFHTASPVTDDPEKVEQAIIGTKNVMTAAAEANVRRVVFTSSIGTVYMNPNRSPDAVVDESCWSDLEFCKNTKNWYCYAKTVAEQTAWEVAKEKEVDLVVVNPMLVLGPLLQEGVNASVVHIMKYLTGSVKTYVNAVQGYVDVKDVAKAHVLVYETPSASGRYICVESMLHRGELVDILANLFPEYSVPTKCSDEVNPKKKPYKYTVAKLKSLGMEFTPIKQCIYETVKSLQEKGHLPLPSKLQR 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 26503770 26505830 - CmPI595203_10g020640.1 Cmu10g2064 427594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu10g2064 329 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 12 314 IPR050425 GO:0016616(PANTHER)
Cmu10g2064 329 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 316 IPR036291 -
Cmu10g2064 329 FunFam Cinnamoyl-CoA reductase 1 4 329 - -
Cmu10g2064 329 CDD FR_SDR_e 13 298 - -
Cmu10g2064 329 Gene3D - 3 329 - -
Cmu10g2064 329 Pfam NAD dependent epimerase/dehydratase family 13 244 IPR001509 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu09g0315 Cmu-Chr9:2993924 Cmu10g2064 Cmu-Chr10:26503770 6.10E-147 dispersed
Cmu10g2062 Cmu-Chr10:26490287 Cmu10g2064 Cmu-Chr10:26503770 1.30E-150 dispersed
Cmu10g2064 Cmu-Chr10:26503770 Cmu11g1890 Cmu-Chr11:30921141 1.80E-71 dispersed
Cmu10g2063 Cmu-Chr10:26494443 Cmu10g2064 Cmu-Chr10:26503770 1.00E-175 tandem
Cmu10g2064 Cmu-Chr10:26503770 Cmu10g2065 Cmu-Chr10:26516711 7.20E-161 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu10g2064 K09753 - csv:116401668 608.216