Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu10g2065 ATGCCCCTCGCCGCCGCCGTAGCTTCCGGTCAAATTGTTTGTGTCACCGGCGCCGGTGGCTTCATTGCCTCTTGGCTTGTGAAGCTTCTTCTTCAAAAGGGTTACACTGTTAGAGGCACTGTAAGAAACCCAGATGATCGGAAGAATGATCATTTGAAAGAGTTAGATGGAGCTGAGGAAAGGTTGACGCTGTACAGTGCTGATCTACTTGATTTCGACAGTCTTAAAGCCGCCATTATCGGTTGTGATGGTGTTTTCCACACGGCGTCTCCGGTGACTGACGACCCCGAAAAGGTGGAGCAGGCAATAATTGGGACGAAAAATGTTATAATGGCGGCGGCGGAGGCCAAGGTCCGGCGAGTGGTGTTCACATCGTCCATTGGAACTATACACATGAACCCTAATCGGAGCCCCGACACGGTGGTGGATGAGTCTTGTTGGAGTGACCTTGACTTTTGCAAAAATACAAAGAATTGGTATTGTTATGCAAAAACAGTGGCAGAGCAAACAGCATGGGCAATGGCAGAGGAGAAAGGAGTGGATTTAGTAGTGGTGAATCCAATGTTGGTGCTTGGACCATTATTACAACAAACAATCAATGCAAGTGTAGCTCATATAATGAAGTACTTGACTGGCTCAGTCAAGACATACGTCAATGCAGTTCAAGGATACGTTCATGTTAAGGATGTTGCAAAAGCTCACTTGTTGGTGTATGAGACTCCCTCTGCATTTGGTAGATATATTTGTGTTGAAACTATGCTTCATCGTGGAGAATTGGTTGAAATTTTGGCTAAATTCTTTCCTGAGTATCCCATTCCTACCAAGTGCTCTGACCAGGTGAACCCTAAGAAGAAACCGTACAAATTTAGTGTAAAAAAGCTGAAGGACTTGGGAATGGATCAATTCATACCTGTGAAGCAATGCATATATGAAACTGTGAAAAGCCTTCAAGAGAAGGGTCATCTTCCACTTCCTTAA 978 44.89 MPLAAAVASGQIVCVTGAGGFIASWLVKLLLQKGYTVRGTVRNPDDRKNDHLKELDGAEERLTLYSADLLDFDSLKAAIIGCDGVFHTASPVTDDPEKVEQAIIGTKNVIMAAAEAKVRRVVFTSSIGTIHMNPNRSPDTVVDESCWSDLDFCKNTKNWYCYAKTVAEQTAWAMAEEKGVDLVVVNPMLVLGPLLQQTINASVAHIMKYLTGSVKTYVNAVQGYVHVKDVAKAHLLVYETPSAFGRYICVETMLHRGELVEILAKFFPEYPIPTKCSDQVNPKKKPYKFSVKKLKDLGMDQFIPVKQCIYETVKSLQEKGHLPLP 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 26516711 26523639 - CmPI595203_10g020650.1 Cmu10g2065 427595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu10g2065 325 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 317 IPR036291 -
Cmu10g2065 325 Gene3D - 4 325 - -
Cmu10g2065 325 CDD FR_SDR_e 13 298 - -
Cmu10g2065 325 FunFam Cinnamoyl-CoA reductase 1 4 325 - -
Cmu10g2065 325 Pfam NAD dependent epimerase/dehydratase family 13 243 IPR001509 -
Cmu10g2065 325 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 12 314 IPR050425 GO:0016616(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g2332 Cmu-Chr5:32562472 Cmu10g2065 Cmu-Chr10:26516711 1.50E-62 dispersed
Cmu06g0042 Cmu-Chr6:413603 Cmu10g2065 Cmu-Chr10:26516711 2.30E-50 dispersed
Cmu10g2063 Cmu-Chr10:26494443 Cmu10g2065 Cmu-Chr10:26516711 4.10E-156 dispersed
Cmu10g2065 Cmu-Chr10:26516711 Cmu11g1890 Cmu-Chr11:30921141 6.40E-69 dispersed
Cmu10g2064 Cmu-Chr10:26503770 Cmu10g2065 Cmu-Chr10:26516711 7.20E-161 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu10g2065 K09753 - csv:101219069 615.15