Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu10g2106 ATGGAGTTGGTAAGCGAGAAGAGGGATTTTGATTCTTCAAACGACAACAAGAAGCTCAACTCTGCTCAACCACTTCTTGATTCTTCTTATCAACCCTCAGCCGCTGATGACACAAATGCCAAAGAAGCTGAAGAGTTAAGTGAACGCGTAGCTCGAGACCTCAAAGATGGCCTTCATCCCCTAAAGCACAAGTTTGCATTTTGGTACACTCGTCGAACACCTGGAGTTCGGACTCAAACGTCATATGAGGACAACATAAAAAAGATCGTGGACTTCAGCTCGGTTGAAGGTTTTTGGGTAAGCTATTGCCATTTGGCTCGTCCTTCTTCTTTGCCAAGCCCAACAGATCTGCATCTCTTTAAGGAAGGAATCCGTCCACTCTGGGAGGATTCTGCGAATTGCAATGGTGGAAAGTGGATAATACGATTTAAGAAAGTTGTATCTGGGCGATTTTGGGAAGATTTGGTTCTTGCATTAGTGGGCGACCAACTTGATTTTGGCGATAACATATGTGGTGCCGTGCTTAGCATTCGTTTCAACGAGGATATTTTGAGCGTCTGGAACCGCAATGCATCTGATCATCAGGCGGTGATGGGTCTGCGAGATTCAATCAAAAGGCACTTAAAGCTCCCGCATGGGTATGTAATGGAATACAAACCCCACGATGCGTCTCTGCGTGATAACTCGTCATACAGAAACACATGGTTGCGAGGGAACCTTGGAAAGACATCTACACAAGACAAATTCTCAGATGTAGATGCTGGAATAGCGGAGCAGCTAAGTTCTGTCCATTGTAATAATGGACAAACACAGCTGGCTAATGTCAGCTTCTTTTGTCTTGGACAACTCACCATGAATCTTTCAACCCCCATCCCTTCTTCACTTTAA 888 44.82 MELVSEKRDFDSSNDNKKLNSAQPLLDSSYQPSAADDTNAKEAEELSERVARDLKDGLHPLKHKFAFWYTRRTPGVRTQTSYEDNIKKIVDFSSVEGFWVSYCHLARPSSLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRGNLGKTSTQDKFSDVDAGIAEQLSSVHCNNGQTQLANVSFFCLGQLTMNLSTPIPSSL 295
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 26998623 27009968 + CmPI595203_10g021060.1 Cmu10g2106 427636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu10g2106 295 ProSitePatterns Eukaryotic initiation factor 4E signature. 116 139 IPR019770 GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0006413(InterPro)
Cmu10g2106 295 MobiDBLite consensus disorder prediction 1 15 - -
Cmu10g2106 295 Gene3D RNA Cap, Translation Initiation Factor Eif4e 30 231 IPR023398 -
Cmu10g2106 295 Pfam Eukaryotic initiation factor 4E 60 218 IPR001040 GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0006413(InterPro)
Cmu10g2106 295 MobiDBLite consensus disorder prediction 1 44 - -
Cmu10g2106 295 SUPERFAMILY eIF4e-like 36 234 IPR023398 -
Cmu10g2106 295 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 35 233 IPR001040 GO:0000340(PANTHER)|GO:0003723(InterPro)|GO:0003743(PANTHER)|GO:0003743(InterPro)|GO:0006413(InterPro)|GO:0016281(PANTHER)
Cmu10g2106 295 FunFam Eukaryotic translation initiation factor NCBP 30 231 - -
Cmu10g2106 295 MobiDBLite consensus disorder prediction 16 36 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu06g0718 Cmu-Chr6:8437201 Cmu10g2106 Cmu-Chr10:26998623 1.40E-26 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu10g2106 K03259 - csv:101204290 479.174