Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu10g2106 | ATGGAGTTGGTAAGCGAGAAGAGGGATTTTGATTCTTCAAACGACAACAAGAAGCTCAACTCTGCTCAACCACTTCTTGATTCTTCTTATCAACCCTCAGCCGCTGATGACACAAATGCCAAAGAAGCTGAAGAGTTAAGTGAACGCGTAGCTCGAGACCTCAAAGATGGCCTTCATCCCCTAAAGCACAAGTTTGCATTTTGGTACACTCGTCGAACACCTGGAGTTCGGACTCAAACGTCATATGAGGACAACATAAAAAAGATCGTGGACTTCAGCTCGGTTGAAGGTTTTTGGGTAAGCTATTGCCATTTGGCTCGTCCTTCTTCTTTGCCAAGCCCAACAGATCTGCATCTCTTTAAGGAAGGAATCCGTCCACTCTGGGAGGATTCTGCGAATTGCAATGGTGGAAAGTGGATAATACGATTTAAGAAAGTTGTATCTGGGCGATTTTGGGAAGATTTGGTTCTTGCATTAGTGGGCGACCAACTTGATTTTGGCGATAACATATGTGGTGCCGTGCTTAGCATTCGTTTCAACGAGGATATTTTGAGCGTCTGGAACCGCAATGCATCTGATCATCAGGCGGTGATGGGTCTGCGAGATTCAATCAAAAGGCACTTAAAGCTCCCGCATGGGTATGTAATGGAATACAAACCCCACGATGCGTCTCTGCGTGATAACTCGTCATACAGAAACACATGGTTGCGAGGGAACCTTGGAAAGACATCTACACAAGACAAATTCTCAGATGTAGATGCTGGAATAGCGGAGCAGCTAAGTTCTGTCCATTGTAATAATGGACAAACACAGCTGGCTAATGTCAGCTTCTTTTGTCTTGGACAACTCACCATGAATCTTTCAACCCCCATCCCTTCTTCACTTTAA | 888 | 44.82 | MELVSEKRDFDSSNDNKKLNSAQPLLDSSYQPSAADDTNAKEAEELSERVARDLKDGLHPLKHKFAFWYTRRTPGVRTQTSYEDNIKKIVDFSSVEGFWVSYCHLARPSSLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRGNLGKTSTQDKFSDVDAGIAEQLSSVHCNNGQTQLANVSFFCLGQLTMNLSTPIPSSL | 295 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 26998623 | 27009968 | + | CmPI595203_10g021060.1 | Cmu10g2106 | 427636 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu10g2106 | 295 | ProSitePatterns | Eukaryotic initiation factor 4E signature. | 116 | 139 | IPR019770 | GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0006413(InterPro) | |
Cmu10g2106 | 295 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
Cmu10g2106 | 295 | Gene3D | RNA Cap, Translation Initiation Factor Eif4e | 30 | 231 | IPR023398 | - | |
Cmu10g2106 | 295 | Pfam | Eukaryotic initiation factor 4E | 60 | 218 | IPR001040 | GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0006413(InterPro) | |
Cmu10g2106 | 295 | MobiDBLite | consensus disorder prediction | 1 | 44 | - | - | |
Cmu10g2106 | 295 | SUPERFAMILY | eIF4e-like | 36 | 234 | IPR023398 | - | |
Cmu10g2106 | 295 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED | 35 | 233 | IPR001040 | GO:0000340(PANTHER)|GO:0003723(InterPro)|GO:0003743(PANTHER)|GO:0003743(InterPro)|GO:0006413(InterPro)|GO:0016281(PANTHER) | |
Cmu10g2106 | 295 | FunFam | Eukaryotic translation initiation factor NCBP | 30 | 231 | - | - | |
Cmu10g2106 | 295 | MobiDBLite | consensus disorder prediction | 16 | 36 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu06g0718 | Cmu-Chr6:8437201 | Cmu10g2106 | Cmu-Chr10:26998623 | 1.40E-26 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu10g2106 | K03259 | - | csv:101204290 | 479.174 |