Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu10g2144 | ATGTTTTTGGTAGGGAAAAGGATAAAGACTGCCATTTTGTACTTCAGAGACTCGGAAATAAACTACAAGGAACTCGCAAAGTTGCTTCACTTTTCTCTCTGTGCTTGCATTGTTGGTTTTGATATTGCTTTGATTGTGAATCAAGGTTCACTGCTTGAGTTTCGGGTCAGCCATCAACAGATCTGGCCTGAGAGTGTGTTTGAGCCGGAGCTGTTGATGGAGCCACTTGTTGATGGTATGAGTTCTTTACTGAAAACTCAGAACCCGACATCTACATCAAGGAATCTCGATTCATCTCGCCAGCCATCTCCTAAACAGTCTAGGAATGAAGCAACTTCTTCGGCGTCCTACCTTTGGTCTCAAAATTGTGCCAAGAAACCCCTTCGCCATCCAAATGGTTCTTCTGGGAAATCCGAGCTAGTAAACCCAACAGATAGTTCACATAAATCAACTGAAAGTTCTTTTCAGAAGAAGGTTCCTTTGGAGGGAGGTGAAGCAGAACCTCTTGTGAAGCATATCATCGATGATTCTAAGGATTGTTGTTCAAGTGGCTCAGAAGAATCTGGAAATCAAGTATTGAACGCATCGAAAGTAGCTGCCACGCAAATAATTGATCAACTAAAGTCTCAGCCAGCTGAAATATCTTGTCCAAGTCCTCAGAACAGCTTATATTCCACGACTTTATATGCAGAGGCCAAACAAAGTTTCTCAAACACAGAAGTCAGTGAATGTGCAAGCAGCATTGAAAAGTCTTGTGAAAGCATCGACATCACAAATTCCCTTGATCTTGACAAAAGCAGGAAAACAAGTGTTTACCGAGGCAGCACTGGCAGTGATATCAGTGATGAAAGCAATTCGAGTAGTTTAAGCAATGCCATGTATAAGCCTCATAAAGCAAATGATACAAGATGGGAAGCAATGCAAGTTGTGAGATCTCATGATGGGATGTTAGGACTTAACCATTTCCGGTTGCTGCGAAGACTGGGATGTGGTGATATTGGCAGTGTCTATCTTTCAGAGTTAACTGGTACCAAAACTTACTTTGCCATGAAGGTTATGGATAAGGCTGCTTTGGCAAGTAGGAAGAAGCTTCTGAGGGCTCAGACTGAACGCGAGATATTGCAATCTCTGGATCATCCTTTCCTGCCAACTTTGTATACACACTTTGAGACAGAGAAGTTCTCTTGTTTGGTAATGGAGTTTTGCCCTGGGGGCGACTTGCATGCGCTTAGGCAGAGACAGCCCGGAAAATTTTTTCCAGAGCATGCTGCAAGATTCTATGTGGCTGAAGTTCTCCTTGCTTTGGAGTATCTGCACATGCTTGGGATAATCTACAGGGACCTAAAACCTGAAAATGTGTTAGTGAGAGACGATGGGCACATAATGCTATCTGATTTTGACCTGTCTCTTAGATGCGCAGTCTCCCCGACACTTGTTAAATCATCAAACTCGGGGTTAGAAGCTAAAAGCTCGGGTTACTGTGCTCAGCCTGCCTGCATTGAGCCAACTTGCATAATGCAGCCAGATTGTATCCAGCCAGCATGTTTTACACCTCGCTTCCTAAGCAGACACAGGAAAGAAAAGAAGTCCAAACCGAAGAGTGAAGTATATCATCAAGTGAGCCCTCTACCGGAGCTCATTGCCGAACCCACAAGTGCAAGATCGATGTCCTTCGTTGGTACACATGAGTACCTGGCACCTGAAATCATAAAAGGTGAAGGCCATGGCAGTGCCGTGGATTGGTGGACTTTTGGGATCTTTCTTTACGAGCTTTTGTTTGGCCGAACTCCGTTCAAGGGGGCTGGGAACCGTGCTACTTTGTTTAATGTGGTTGGTCAGCCATTGAGATTTCCTGAGTCTCCTTCTGTGAGCTTTGCAGCAAGGGACTTGATCCGAGGTTTGCTTGTAAAAGAACCACAGCATCGTCTCGCTTATAGGCGTGGTGCTACCGAGATCAAGCAACATCCATTCTTCCAGAGCGTGAATTGGGCACTCATCCGCTGTGCCAATCCTCCCGAGGTGCCAAGAGTAGATGTCATTGATTTCTCTTCAAGGATGGAGACACCACACGCACCGGCAGGCGAAAAGATGCCGGGAGTCGATGTGAAGCCTTCAGGTAATTATTTAGAGATCGACTTCTTTTGA | 2145 | 44.99 | MFLVGKRIKTAILYFRDSEINYKELAKLLHFSLCACIVGFDIALIVNQGSLLEFRVSHQQIWPESVFEPELLMEPLVDGMSSLLKTQNPTSTSRNLDSSRQPSPKQSRNEATSSASYLWSQNCAKKPLRHPNGSSGKSELVNPTDSSHKSTESSFQKKVPLEGGEAEPLVKHIIDDSKDCCSSGSEESGNQVLNASKVAATQIIDQLKSQPAEISCPSPQNSLYSTTLYAEAKQSFSNTEVSECASSIEKSCESIDITNSLDLDKSRKTSVYRGSTGSDISDESNSSSLSNAMYKPHKANDTRWEAMQVVRSHDGMLGLNHFRLLRRLGCGDIGSVYLSELTGTKTYFAMKVMDKAALASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHALRQRQPGKFFPEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLVKSSNSGLEAKSSGYCAQPACIEPTCIMQPDCIQPACFTPRFLSRHRKEKKSKPKSEVYHQVSPLPELIAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGAGNRATLFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQSVNWALIRCANPPEVPRVDVIDFSSRMETPHAPAGEKMPGVDVKPSGNYLEIDFF | 714 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 27438753 | 27443217 | - | CmPI595203_10g021440.1 | Cmu10g2144 | 427674 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu10g2144 | 714 | FunFam | Serine/threonine-protein kinase D6PK-like | 320 | 405 | - | - | |
Cmu10g2144 | 714 | SMART | serkin_6 | 322 | 658 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cmu10g2144 | 714 | MobiDBLite | consensus disorder prediction | 127 | 162 | - | - | |
Cmu10g2144 | 714 | FunFam | serine/threonine-protein kinase D6PK-like | 406 | 473 | - | - | |
Cmu10g2144 | 714 | PANTHER | FLIPPASE KINASE 1-RELATED | 181 | 678 | - | GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER) | |
Cmu10g2144 | 714 | ProSiteProfiles | Protein kinase domain profile. | 322 | 658 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cmu10g2144 | 714 | SUPERFAMILY | Protein kinase-like (PK-like) | 297 | 684 | IPR011009 | - | |
Cmu10g2144 | 714 | MobiDBLite | consensus disorder prediction | 270 | 294 | - | - | |
Cmu10g2144 | 714 | Gene3D | Transferase(Phosphotransferase) domain 1 | 406 | 474 | - | - | |
Cmu10g2144 | 714 | MobiDBLite | consensus disorder prediction | 135 | 157 | - | - | |
Cmu10g2144 | 714 | Gene3D | Phosphorylase Kinase; domain 1 | 320 | 405 | - | - | |
Cmu10g2144 | 714 | Gene3D | Transferase(Phosphotransferase) domain 1 | 553 | 676 | - | - | |
Cmu10g2144 | 714 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 443 | 455 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cmu10g2144 | 714 | FunFam | serine/threonine-protein kinase D6PK-like | 553 | 676 | - | - | |
Cmu10g2144 | 714 | MobiDBLite | consensus disorder prediction | 83 | 115 | - | - | |
Cmu10g2144 | 714 | Pfam | Protein kinase domain | 555 | 658 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cmu10g2144 | 714 | Pfam | Protein kinase domain | 323 | 473 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cmu10g2144 | 714 | CDD | STKc_phototropin_like | 321 | 681 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu01g2066 | Cmu-Chr1:33628500 | Cmu10g2144 | Cmu-Chr10:27438753 | 1.00E-184 | dispersed | |
Cmu02g1061 | Cmu-Chr2:20577061 | Cmu10g2144 | Cmu-Chr10:27438753 | 7.50E-99 | dispersed | |
Cmu04g0185 | Cmu-Chr4:4056104 | Cmu10g2144 | Cmu-Chr10:27438753 | 1.70E-147 | dispersed | |
Cmu05g0012 | Cmu-Chr5:161930 | Cmu10g2144 | Cmu-Chr10:27438753 | 9.60E-182 | dispersed | |
Cmu09g0765 | Cmu-Chr9:7271030 | Cmu10g2144 | Cmu-Chr10:27438753 | 5.40E-39 | dispersed | |
Cmu09g0823 | Cmu-Chr9:8031519 | Cmu10g2144 | Cmu-Chr10:27438753 | 6.60E-53 | dispersed | |
Cmu10g2144 | Cmu-Chr10:27438753 | Cmu11g0276 | Cmu-Chr11:3292389 | 6.50E-114 | dispersed | |
Cmu10g2144 | Cmu-Chr10:27438753 | Cmu01g1087 | Cmu-Chr1:17486197 | 1.10E-198 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
75856 | PF00069 | Pkinase | 8.70E-36 | CL0016 | Cmu | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu10g2144 | K08286 | - | csv:101219962 | 1215.68 |