Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu10g2144 ATGTTTTTGGTAGGGAAAAGGATAAAGACTGCCATTTTGTACTTCAGAGACTCGGAAATAAACTACAAGGAACTCGCAAAGTTGCTTCACTTTTCTCTCTGTGCTTGCATTGTTGGTTTTGATATTGCTTTGATTGTGAATCAAGGTTCACTGCTTGAGTTTCGGGTCAGCCATCAACAGATCTGGCCTGAGAGTGTGTTTGAGCCGGAGCTGTTGATGGAGCCACTTGTTGATGGTATGAGTTCTTTACTGAAAACTCAGAACCCGACATCTACATCAAGGAATCTCGATTCATCTCGCCAGCCATCTCCTAAACAGTCTAGGAATGAAGCAACTTCTTCGGCGTCCTACCTTTGGTCTCAAAATTGTGCCAAGAAACCCCTTCGCCATCCAAATGGTTCTTCTGGGAAATCCGAGCTAGTAAACCCAACAGATAGTTCACATAAATCAACTGAAAGTTCTTTTCAGAAGAAGGTTCCTTTGGAGGGAGGTGAAGCAGAACCTCTTGTGAAGCATATCATCGATGATTCTAAGGATTGTTGTTCAAGTGGCTCAGAAGAATCTGGAAATCAAGTATTGAACGCATCGAAAGTAGCTGCCACGCAAATAATTGATCAACTAAAGTCTCAGCCAGCTGAAATATCTTGTCCAAGTCCTCAGAACAGCTTATATTCCACGACTTTATATGCAGAGGCCAAACAAAGTTTCTCAAACACAGAAGTCAGTGAATGTGCAAGCAGCATTGAAAAGTCTTGTGAAAGCATCGACATCACAAATTCCCTTGATCTTGACAAAAGCAGGAAAACAAGTGTTTACCGAGGCAGCACTGGCAGTGATATCAGTGATGAAAGCAATTCGAGTAGTTTAAGCAATGCCATGTATAAGCCTCATAAAGCAAATGATACAAGATGGGAAGCAATGCAAGTTGTGAGATCTCATGATGGGATGTTAGGACTTAACCATTTCCGGTTGCTGCGAAGACTGGGATGTGGTGATATTGGCAGTGTCTATCTTTCAGAGTTAACTGGTACCAAAACTTACTTTGCCATGAAGGTTATGGATAAGGCTGCTTTGGCAAGTAGGAAGAAGCTTCTGAGGGCTCAGACTGAACGCGAGATATTGCAATCTCTGGATCATCCTTTCCTGCCAACTTTGTATACACACTTTGAGACAGAGAAGTTCTCTTGTTTGGTAATGGAGTTTTGCCCTGGGGGCGACTTGCATGCGCTTAGGCAGAGACAGCCCGGAAAATTTTTTCCAGAGCATGCTGCAAGATTCTATGTGGCTGAAGTTCTCCTTGCTTTGGAGTATCTGCACATGCTTGGGATAATCTACAGGGACCTAAAACCTGAAAATGTGTTAGTGAGAGACGATGGGCACATAATGCTATCTGATTTTGACCTGTCTCTTAGATGCGCAGTCTCCCCGACACTTGTTAAATCATCAAACTCGGGGTTAGAAGCTAAAAGCTCGGGTTACTGTGCTCAGCCTGCCTGCATTGAGCCAACTTGCATAATGCAGCCAGATTGTATCCAGCCAGCATGTTTTACACCTCGCTTCCTAAGCAGACACAGGAAAGAAAAGAAGTCCAAACCGAAGAGTGAAGTATATCATCAAGTGAGCCCTCTACCGGAGCTCATTGCCGAACCCACAAGTGCAAGATCGATGTCCTTCGTTGGTACACATGAGTACCTGGCACCTGAAATCATAAAAGGTGAAGGCCATGGCAGTGCCGTGGATTGGTGGACTTTTGGGATCTTTCTTTACGAGCTTTTGTTTGGCCGAACTCCGTTCAAGGGGGCTGGGAACCGTGCTACTTTGTTTAATGTGGTTGGTCAGCCATTGAGATTTCCTGAGTCTCCTTCTGTGAGCTTTGCAGCAAGGGACTTGATCCGAGGTTTGCTTGTAAAAGAACCACAGCATCGTCTCGCTTATAGGCGTGGTGCTACCGAGATCAAGCAACATCCATTCTTCCAGAGCGTGAATTGGGCACTCATCCGCTGTGCCAATCCTCCCGAGGTGCCAAGAGTAGATGTCATTGATTTCTCTTCAAGGATGGAGACACCACACGCACCGGCAGGCGAAAAGATGCCGGGAGTCGATGTGAAGCCTTCAGGTAATTATTTAGAGATCGACTTCTTTTGA 2145 44.99 MFLVGKRIKTAILYFRDSEINYKELAKLLHFSLCACIVGFDIALIVNQGSLLEFRVSHQQIWPESVFEPELLMEPLVDGMSSLLKTQNPTSTSRNLDSSRQPSPKQSRNEATSSASYLWSQNCAKKPLRHPNGSSGKSELVNPTDSSHKSTESSFQKKVPLEGGEAEPLVKHIIDDSKDCCSSGSEESGNQVLNASKVAATQIIDQLKSQPAEISCPSPQNSLYSTTLYAEAKQSFSNTEVSECASSIEKSCESIDITNSLDLDKSRKTSVYRGSTGSDISDESNSSSLSNAMYKPHKANDTRWEAMQVVRSHDGMLGLNHFRLLRRLGCGDIGSVYLSELTGTKTYFAMKVMDKAALASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHALRQRQPGKFFPEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLVKSSNSGLEAKSSGYCAQPACIEPTCIMQPDCIQPACFTPRFLSRHRKEKKSKPKSEVYHQVSPLPELIAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGAGNRATLFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQSVNWALIRCANPPEVPRVDVIDFSSRMETPHAPAGEKMPGVDVKPSGNYLEIDFF 714
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 27438753 27443217 - CmPI595203_10g021440.1 Cmu10g2144 427674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu10g2144 714 FunFam Serine/threonine-protein kinase D6PK-like 320 405 - -
Cmu10g2144 714 SMART serkin_6 322 658 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu10g2144 714 MobiDBLite consensus disorder prediction 127 162 - -
Cmu10g2144 714 FunFam serine/threonine-protein kinase D6PK-like 406 473 - -
Cmu10g2144 714 PANTHER FLIPPASE KINASE 1-RELATED 181 678 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Cmu10g2144 714 ProSiteProfiles Protein kinase domain profile. 322 658 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu10g2144 714 SUPERFAMILY Protein kinase-like (PK-like) 297 684 IPR011009 -
Cmu10g2144 714 MobiDBLite consensus disorder prediction 270 294 - -
Cmu10g2144 714 Gene3D Transferase(Phosphotransferase) domain 1 406 474 - -
Cmu10g2144 714 MobiDBLite consensus disorder prediction 135 157 - -
Cmu10g2144 714 Gene3D Phosphorylase Kinase; domain 1 320 405 - -
Cmu10g2144 714 Gene3D Transferase(Phosphotransferase) domain 1 553 676 - -
Cmu10g2144 714 ProSitePatterns Serine/Threonine protein kinases active-site signature. 443 455 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu10g2144 714 FunFam serine/threonine-protein kinase D6PK-like 553 676 - -
Cmu10g2144 714 MobiDBLite consensus disorder prediction 83 115 - -
Cmu10g2144 714 Pfam Protein kinase domain 555 658 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu10g2144 714 Pfam Protein kinase domain 323 473 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu10g2144 714 CDD STKc_phototropin_like 321 681 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g2066 Cmu-Chr1:33628500 Cmu10g2144 Cmu-Chr10:27438753 1.00E-184 dispersed
Cmu02g1061 Cmu-Chr2:20577061 Cmu10g2144 Cmu-Chr10:27438753 7.50E-99 dispersed
Cmu04g0185 Cmu-Chr4:4056104 Cmu10g2144 Cmu-Chr10:27438753 1.70E-147 dispersed
Cmu05g0012 Cmu-Chr5:161930 Cmu10g2144 Cmu-Chr10:27438753 9.60E-182 dispersed
Cmu09g0765 Cmu-Chr9:7271030 Cmu10g2144 Cmu-Chr10:27438753 5.40E-39 dispersed
Cmu09g0823 Cmu-Chr9:8031519 Cmu10g2144 Cmu-Chr10:27438753 6.60E-53 dispersed
Cmu10g2144 Cmu-Chr10:27438753 Cmu11g0276 Cmu-Chr11:3292389 6.50E-114 dispersed
Cmu10g2144 Cmu-Chr10:27438753 Cmu01g1087 Cmu-Chr1:17486197 1.10E-198 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75856 PF00069 Pkinase 8.70E-36 CL0016 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu10g2144 K08286 - csv:101219962 1215.68