Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu10g2195 | ATGGATAGAATCATCCAGTCGCCGGCGTCCAAGTTCCGCCCCTTTCGGCGACAGCTAATCGGCTCGTCCTCCGATTCGGCCACCGGAGCGGCGGCGGCCACGGACGAACACCCAAATTACATCCTCCTCCGCTACCAAATCCTCGATCCTGATAGCGACATCGTAGCGCAATGGAACCGGGTGTTTCTAGTGACATGCCTGATCGCTCTGTTCATCGATCCGCTGTATTTCTACACGTCGTCTGTGGGAGGACCGGCGTGCCTGACCTCAGAGGTGAATCTGGGAGTGGTGATCACATTCTTCAGAACGGTGACGGATCTGTTCTTCTTGCTGCACATGGTGCTGAAGTTTCGAACCGCGTATGTGGCTCCAAGCTCTAGGGTTTTTGGAAGGGGAGAGCTGGTTATGGATGCCAAAGCCATTGCTACGCGCTATTTGAAATCTGATTTTGTGATTGATCTTGCCGCTACTCTCCCCCTCCCACAAATAGTGATGTGGTTGGTGATTCCAGCAACAAGAAACTCAAGGGTAGATCATGCCAACAACACAATTGCTCTCCTTGTTTTGCTACAATACGTTCCAAGGCTGTTCCTCATCTTCCCTCTCAACCAACGCATCATCAAAACCACTGGTGTTGTTGCCAAAACTGCTTGGGCCGGTGCTGCCTACAATCTCATCCTCTACATGCTTGCTAGTCATGTTTTGGGATCTACATGGTATTTGCTGTCCATAGGGAGACAGTTCTCATGTTGGAAATCAGAGTGTGCAAAGGAAAATGCCTCCAAAGTTCTAACATGCCTACCCTTCTTCTTGGATTGTAACAGTTTGAAAGACACTGAAAGACAATATTGGCTCAATGTCACTCAGGTTACTTCCAAATGTGATCCTAGGAATGAGAACATAAAGTTCAAGTTTGGAATGTTCTCAGATGCTTTCACCAATGATGTTGCCTCCTCCCATTTCTTTGCAAAGTACTTTTATTGTCTTTGGTGGGGCCTCAGAAATTTAAGTTCATACGGTCAAACTTTGGATACAACAACTTATATTGGCGAGACATTATTTTGCATATCAACTTGCATATTTGGGTTGATATTATTTTCACAACTCATTGGCAACATGCAGACATATTTGCAATCAATGACAGTAAGACTTGAAGAATGGAGGATAAAGAGAAGGGACACTGAAGAATGGATGAGACGTCGTCAATTACCACCAGATTTGCAGGAACGAGTTCGCCGATTCGTCCAATATAAATGGCTGGCCACGAGAGGAGTTAATGAAGAATCTATATTGCGTTCGTTGCCTATAGACCTTCGTCGTGAGATTCAACAACATTTGTGTTTGTCACTCGTTCGTCGTGTTCCTTTCTTCTCACAAATGGATGATCAACTTCTTGATGCCATATGTGAGCGTTTAGTCTCATCCTTGTGTACTCAAGGAACATATATTGTGCGAGAGGATGACCCAGTTAACGAAATGTTGTTTATTATAAGAGGACAACTAGAGAGCTCAACGACGAATGGCGGTCGATCTGGCTTTTTCAACTCCATTACACTAAAACCAGGAGATTTTTGTGGTGAAGAACTATTGACATGGGCTTTGATGCCAAGCTCTAGTTTGAATATGCCTTCTTCTACTCGAAGCGTCCGTGCACTTACCGAAGTTGAAGCTTTTGCTCTTCGAGCTGAGGATCTCAAGTTCGTTGCTGGACAATTTAAACGCCTGCATAGCAAGAAACTACAACATGCCTTTAGGTATTATTCCCATCAATGGAGGACATGGGGTGCTTGTTTAATTCAAGTAGCTTGGAGGAGGCTTCAGAAGAGAAAATTGGCAAAGAGATCAGCAGCATTCAGAGACAGTTTAAGTTACTATGCAGATTCAGTGCAACAAGATATCGAATACGATATCGAGCTAGCAGATGAAAATTATGACGACGACAGCAACGACGACGAGGACGACGACGACATGTCTTCTGCAGACTACATGAACAAAACTCAACATCTAGGGGCCACAATTTTGGCTTCAAAGTTTGCTGCCAACACTAGAAGAGGAGTTAATCAAAAGGCTCAAACATCCAAACCTTCAAGTTTGAAAATGCCGAAGTTGTTTAAACCAGATGAACCTGATTTTTCTATGGATGGATGA | 2148 | 44.46 | MDRIIQSPASKFRPFRRQLIGSSSDSATGAAAATDEHPNYILLRYQILDPDSDIVAQWNRVFLVTCLIALFIDPLYFYTSSVGGPACLTSEVNLGVVITFFRTVTDLFFLLHMVLKFRTAYVAPSSRVFGRGELVMDAKAIATRYLKSDFVIDLAATLPLPQIVMWLVIPATRNSRVDHANNTIALLVLLQYVPRLFLIFPLNQRIIKTTGVVAKTAWAGAAYNLILYMLASHVLGSTWYLLSIGRQFSCWKSECAKENASKVLTCLPFFLDCNSLKDTERQYWLNVTQVTSKCDPRNENIKFKFGMFSDAFTNDVASSHFFAKYFYCLWWGLRNLSSYGQTLDTTTYIGETLFCISTCIFGLILFSQLIGNMQTYLQSMTVRLEEWRIKRRDTEEWMRRRQLPPDLQERVRRFVQYKWLATRGVNEESILRSLPIDLRREIQQHLCLSLVRRVPFFSQMDDQLLDAICERLVSSLCTQGTYIVREDDPVNEMLFIIRGQLESSTTNGGRSGFFNSITLKPGDFCGEELLTWALMPSSSLNMPSSTRSVRALTEVEAFALRAEDLKFVAGQFKRLHSKKLQHAFRYYSHQWRTWGACLIQVAWRRLQKRKLAKRSAAFRDSLSYYADSVQQDIEYDIELADENYDDDSNDDEDDDDMSSADYMNKTQHLGATILASKFAANTRRGVNQKAQTSKPSSLKMPKLFKPDEPDFSMDG | 715 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 28034987 | 28038656 | - | CmPI595203_10g021950.1 | Cmu10g2195 | 427725 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu10g2195 | 715 | Pfam | Ion transport protein | 58 | 383 | IPR005821 | GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cmu10g2195 | 715 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 456 | 586 | IPR000595 | - | |
Cmu10g2195 | 715 | Gene3D | Helix hairpin bin | 383 | 447 | - | - | |
Cmu10g2195 | 715 | PANTHER | CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED | 42 | 693 | - | - | |
Cmu10g2195 | 715 | CDD | CAP_ED | 456 | 587 | IPR000595 | - | |
Cmu10g2195 | 715 | SMART | cnmp_10 | 456 | 587 | IPR000595 | - | |
Cmu10g2195 | 715 | SUPERFAMILY | cAMP-binding domain-like | 386 | 581 | IPR018490 | - | |
Cmu10g2195 | 715 | Gene3D | - | 61 | 381 | - | - | |
Cmu10g2195 | 715 | MobiDBLite | consensus disorder prediction | 701 | 715 | - | - | |
Cmu10g2195 | 715 | MobiDBLite | consensus disorder prediction | 683 | 698 | - | - | |
Cmu10g2195 | 715 | MobiDBLite | consensus disorder prediction | 683 | 715 | - | - | |
Cmu10g2195 | 715 | FunFam | Cyclic nucleotide-gated ion channel 1 | 454 | 572 | - | - | |
Cmu10g2195 | 715 | Gene3D | Jelly Rolls | 454 | 574 | IPR014710 | - | |
Cmu10g2195 | 715 | SUPERFAMILY | Voltage-gated potassium channels | 49 | 378 | - | - | |
Cmu10g2195 | 715 | FunFam | Cyclic nucleotide-gated ion channel 1 | 383 | 447 | - | - | |
Cmu10g2195 | 715 | Pfam | Cyclic nucleotide-binding domain | 479 | 566 | IPR000595 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu10g2195 | Cmu-Chr10:28034987 | Cmu10g2225 | Cmu-Chr10:28377738 | 3.50E-184 | dispersed | |
Cmu02g2116 | Cmu-Chr2:34818522 | Cmu10g2195 | Cmu-Chr10:28034987 | 1.00E-202 | transposed | |
Cmu04g0937 | Cmu-Chr4:23814588 | Cmu10g2195 | Cmu-Chr10:28034987 | 1.10E-173 | transposed | |
Cmu05g2693 | Cmu-Chr5:35431280 | Cmu10g2195 | Cmu-Chr10:28034987 | 3.00E-244 | transposed | |
Cmu06g1352 | Cmu-Chr6:24717597 | Cmu10g2195 | Cmu-Chr10:28034987 | 3.20E-241 | transposed | |
Cmu07g1669 | Cmu-Chr7:32030418 | Cmu10g2195 | Cmu-Chr10:28034987 | 3.10E-90 | transposed | |
Cmu11g0467 | Cmu-Chr11:5173677 | Cmu10g2195 | Cmu-Chr10:28034987 | 2.20E-101 | transposed | |
Cmu10g2195 | Cmu-Chr10:28034987 | Cmu06g1739 | Cmu-Chr6:28364609 | 9.00E-265 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu10g2195 | K05391 | - | csv:101216651 | 1339.32 |