Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu10g2199 ATGGATCTGGAGAGTGCTATTGGGGGCCACCCAATCAAGAAAGATTCATGGAGAGCTGTTTTAACTTTGGCTTATCAAAGCTTGGGGGTTGTTTATGGCGATTTGAGCACTTCCCCTTTGTATGTTTACAAAAGTACTTTTGCTGAGGATATTCAGCACTCTGAATCCAACGAAGAGATTTATGGAGTTCTTTCTTTTGTTTTCTGGACTCTCACGCTCATTCCTTTGATTAAGTACGTTTTTATTGTGCTTCGAGCTGATGATAATGGCGAAGGAGGAACTTTCGCTTTGTACTCATTGCTCTGCCGCCATGCCCGAGTTAGCTCCTTGCCCAATTGCCAACTTGCAGATGAGGACCTTTCGGAATATACAAAAGATGGGATGGATTTAACCAACAAGAATACTTGTGGGTCGAGATTGAAATCGACATTAGAGAAGCACAGAGTGCTGCAGAGGGTTTTGCTTGTTCTAGCTTTGATTGGGGCTTGCATGGTGATTGGAGATGGAGTTCTTACACCTGCAATTTCTGTTTTCTCTGCGGTTTCTGGGCTGGAATTTTCCATGGCTAGAGAACACCATCGCTATGTTGAAGTCCCGGTTGCTTGTGCCATATTGGTAATCCTGTTTGCGATTCAACATTATGGAACCCATCGAGTTGGGTTTCTGTTTGCACCAGTTGTAATTACCTGGCTCCTCTGTATCAGTTCCATAGGGCTGTACAATATCTTCCACTGGAATCCACATGTTTACCGAGCACTCTCCCCATATTATATGTACAAATTTCTGAAGAAGACCCAAAGGGGAGGTTGGATGTCCCTCGGCGGAATCCTGTTATGTATTACAGGTTCAGAAGCAATGTTTGCTGATCTCGGGCACTTCTCGCAGCTATCTATCAAGATTGCTTTCTCTTTTGTGGTTTATCCATCTTTGGTCCTGGCATACATGGGACAAGCTGCTTATCTTTCTCAACATCATGGTGCGGAAAATAACTACCGAATTGGATTTTACGTGTCTGTTCCTGAGAAAATAAGAGTGCCTGTTCTTGTGATCGCCATTTTAGCCGCAGTGGTAGGAAGTCAAGCTGTCATTACTGGGACTTTTTCGATAATAAAACAGTGCTCCTCATTGGGTTGCTTCCCGAGGGTCAAAATTGTTCATACCTCCTCGAAAATCCATGGTCAGATTTATATACCGGAGATCAACTGGACGTTGATGCTCTTATGCTTGGCTATTACCATTGGCTTTCGAGACACGAAACGCATGGGCAATGCATCAGGCTTAGCAGTGATAACTGTTATGCTGGTGACAACCTGCCTAATGTCTGTAGTCATCATCTTGTGCTGGCATAAAAGTTTTCTCTATGCCATTGCCTTCATACTCATTTTCGGTTCAATCGAATCACTCTACTTTTCAGCATCTCTCATCAAGTTTCGAGAAGGGGCCTGGGTTCCCATTGCCCTCTCATTCATCTTCCTAATAGTCATGTATGTATGGCATTACGGAACGCGCAAAAAATACGAATTTGATGTTCAAAACAAAGTCTCAATCAACTGGCTCCTAGGCCTAGGTCCCAGTTTAGGCATTGTGAGAGTACGCGGGATTGGCCTCATATACACCGAACTCGTCTCAGGAATCCCCGCCATCTTCTCCCACTTCGTAACAAACCTCCCCGCCTTCCACCAAGTCCTAGTCTTCCTCTGCATCAAATCCGTCCCTGTCCCACACGTGAGACCAGGAGAAAGGTTCCTAGTAGGACGAGTTGGGCCAAAAGAGTACCGTCTCTACCGATGCATAGCACGATATGGCTATCGTGACATCCACAAAGACGACATGGAGTTCGAGAAGGACTTGGTGTGCAGCATTGCCGAGTTCATCCGGTCCGAAAAGGCAGAGACAAGCGTAAAGCTAGAAGATGTAGAAGAAAGTGAGAGAATGACAGTAGTTGGGACATCTTCAACACATGTAGATGGAGTGAGAATGTGTGAAGATGAAGGAGAAACAGCAGAAACATCAGAGGTAAGAGAGATAAAATCACCAAAAAGGCTGAGAAAAAGAGTGAGGTTTGTTGTACCAGAGAGTCCACGAATGGAAATGGAAACAAGGAGGGAGCTGCAAGAGCTAATGGAAGCAAGAGAAGCAGGAATGGCTTTCATAATGGGACATTCATATGTGAAAGCAAAGAGAGGATCAGGTTTGGTGAAGAAAGTGGTGATAAATTATGGGTATGATTTTTTGAGAAGAAACTCAAGAGGGCCAAGTTATGCTTGGAGTGTGCCTCATGCATCTACTTTAGAGGTGGGAATGGTCTACCAAGTTTGA 2319 44.5 MDLESAIGGHPIKKDSWRAVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIQHSESNEEIYGVLSFVFWTLTLIPLIKYVFIVLRADDNGEGGTFALYSLLCRHARVSSLPNCQLADEDLSEYTKDGMDLTNKNTCGSRLKSTLEKHRVLQRVLLVLALIGACMVIGDGVLTPAISVFSAVSGLEFSMAREHHRYVEVPVACAILVILFAIQHYGTHRVGFLFAPVVITWLLCISSIGLYNIFHWNPHVYRALSPYYMYKFLKKTQRGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFSFVVYPSLVLAYMGQAAYLSQHHGAENNYRIGFYVSVPEKIRVPVLVIAILAAVVGSQAVITGTFSIIKQCSSLGCFPRVKIVHTSSKIHGQIYIPEINWTLMLLCLAITIGFRDTKRMGNASGLAVITVMLVTTCLMSVVIILCWHKSFLYAIAFILIFGSIESLYFSASLIKFREGAWVPIALSFIFLIVMYVWHYGTRKKYEFDVQNKVSINWLLGLGPSLGIVRVRGIGLIYTELVSGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVRPGERFLVGRVGPKEYRLYRCIARYGYRDIHKDDMEFEKDLVCSIAEFIRSEKAETSVKLEDVEESERMTVVGTSSTHVDGVRMCEDEGETAETSEVREIKSPKRLRKRVRFVVPESPRMEMETRRELQELMEAREAGMAFIMGHSYVKAKRGSGLVKKVVINYGYDFLRRNSRGPSYAWSVPHASTLEVGMVYQV 772
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 28068846 28073658 + CmPI595203_10g021990.1 Cmu10g2199 427729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu10g2199 772 Pfam K+ potassium transporter C-terminal domain 533 771 IPR053952 -
Cmu10g2199 772 Pfam K+ potassium transporter integral membrane domain 23 519 IPR053951 -
Cmu10g2199 772 NCBIfam potassium uptake protein 23 772 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cmu10g2199 772 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 15 772 IPR003855 GO:0006813(PANTHER)|GO:0015079(PANTHER)|GO:0015079(InterPro)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu10g1843 Cmu-Chr10:23152869 Cmu10g2199 Cmu-Chr10:28068846 8.40E-168 dispersed
Cmu10g2199 Cmu-Chr10:28068846 Cmu11g0035 Cmu-Chr11:829102 3.90E-189 dispersed
Cmu05g1326 Cmu-Chr5:15268686 Cmu10g2199 Cmu-Chr10:28068846 2.50E-250 transposed
Cmu07g0551 Cmu-Chr7:6602402 Cmu10g2199 Cmu-Chr10:28068846 9.60E-290 transposed
Cmu10g2199 Cmu-Chr10:28068846 Cmu05g2573 Cmu-Chr5:34458125 0.00E+00 wgd
Cmu10g2199 Cmu-Chr10:28068846 Cmu09g1813 Cmu-Chr9:34286718 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu10g2199 K03549 - csv:101211664 1472.22