Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu10g2202 ATGGACCGCAGTTTTCTATACAACCAATTTGCTCCACTGGCTGGAATGATCGCCGCCGAGTGCGCCACCGTCGGCTCAAACACCGTCTACAAAGCCATTAGCGGCCATGAAATCAGCTTCTATGTCTTCACCTTCTACACTTGTCTCGCTGCCGCTCTCGTTCTTCTTCCTTTCGCCTTAATCTTCCGCAGATCTGGCGTTTTTCCGTCCGATAAGTTGTCGTTCTTCCTCAGATTGATCAGCCTGTCGGCGATGGGAGTTGGATGTCAGCTGTTTTCGTATAAAGGTTTGGAATACAGTTCGCCTACGCTTGCTTCCGCCATTAGCAATCTCATTCCAGCTCTCACTTTCATCTTGGCCGTTCTCTTTGGGATGGAGAAACTAGCTTTGAGAAGCTCAAGCAGCATAGCCAAAATCGTTGGCTCGACAGTCTCCATAACAGGTGCACTAGTAGTGGTTCTCTATAAAGGTCCAGTCATTCTATCAAACCCATTTTCTAGGCCAACCAGATTGAATCTTCCTCCTCGTCGTTTGGGCTCTTCCCAACCAAATTGGATAATGGGTGGCCTCTGTTTTTTTGCTCAGTACCTTCTCAACTCTTTCTGGTACATTGTTCTGACCCAAACGATGAACATATATCCAGATGAACTAGTTGTGGTGTGCTTATTTTATGTGTTCGAGGTCATAATAGCTGCACCAATATGCCTATTAGCGGAAGGAAACATCGGTGCTTGGAAGCTGAAAAATAGTCTGGAAGTGGTTGCTGTTTTAAACTCGGGATGTGTGGGTCAATCCTTCGTCTCTGCAATCCACACATGGGGTGTACATGTCAAAGGGCCTGTTTATGTATCAAGTTTCAGGCCACTCTCAATTGCCATTGCTGCTGCTACAGGTGTTATCTTCCTTGGGGACGATCTTCATCTTGGAAGTATTATTGGAGCAATGATAATAGCAAGTGGGTTTTACTCTATAATGTGGGGGAAAATAAAAGAAGAGGACTTGAAGGGACAGGATGGCTTCTCAAGCTTGAAGTCTTCATCAACAGATAAGATTCCATTGTTGAAAAGCTGTAAAGTTCAAAATGACTAA 1089 45.0 MDRSFLYNQFAPLAGMIAAECATVGSNTVYKAISGHEISFYVFTFYTCLAAALVLLPFALIFRRSGVFPSDKLSFFLRLISLSAMGVGCQLFSYKGLEYSSPTLASAISNLIPALTFILAVLFGMEKLALRSSSSIAKIVGSTVSITGALVVVLYKGPVILSNPFSRPTRLNLPPRRLGSSQPNWIMGGLCFFAQYLLNSFWYIVLTQTMNIYPDELVVVCLFYVFEVIIAAPICLLAEGNIGAWKLKNSLEVVAVLNSGCVGQSFVSAIHTWGVHVKGPVYVSSFRPLSIAIAAATGVIFLGDDLHLGSIIGAMIIASGFYSIMWGKIKEEDLKGQDGFSSLKSSSTDKIPLLKSCKVQND 362
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 28098525 28105265 + CmPI595203_10g022020.1 Cmu10g2202 427732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu10g2202 362 Pfam EamA-like transporter family 21 146 IPR000620 GO:0016020(InterPro)
Cmu10g2202 362 PANTHER WAT1-RELATED PROTEIN 15 341 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cmu10g2202 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 231 330 - -
Cmu10g2202 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 155 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu10g1098 Cmu-Chr10:3277934 Cmu10g2202 Cmu-Chr10:28098525 2.20E-19 dispersed
Cmu10g2202 Cmu-Chr10:28098525 Cmu11g1324 Cmu-Chr11:25447424 4.20E-37 dispersed
Cmu10g2202 Cmu-Chr10:28098525 Cmu10g2203 Cmu-Chr10:28114747 1.20E-121 tandem
Cmu10g2202 Cmu-Chr10:28098525 Cmu09g1806 Cmu-Chr9:34220602 1.80E-72 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu10g2202 - - - 0.0