Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu10g2203 ATGGAGAGAAGCTTGTTTTACAAAGATGTTGTGCCATTCGCGGCCATGGTTGCGGCGGAGTGCGCCACCGTTGGCTCCAACACCGGCTTCAAAGCCGCCACAGCTAGAGGCATCAGCTACTACGTCTTCACCCTCTACGTTTGTATGGTCGCCGCCGCCGCCCTCGTCCCGTTTGCAGTTATCTTTCATAAGTCGCCGGAGCTTCCTCCCAACAGAATTTCCTTTTTCTTCAAAATCGTCTGCCTCTCCGCGCTCGGACTATTCTGCCAATTGCTTGGAAACAAAGGACTTGAGTACAGCTCACCAACTCTTTCATCCGCCATTAGCAACCTAATTCCAGCTTTCACTTTCATTATGGCTGTCTTTTTTAGGATGGAAAAGATAGATTTGAAAAGAAGCAGCAGCATAGTGAAAATTGTGGGGTCAACAGTGTCCATAGCAGGTGCTTTGGTAGTGGTTTTGTACAAAGGCCCAATTGTGATATCAAACCCATATTCTCATGGCCCAAAAGAGTTGGGCCTCCTTTATCAAAATTCCCCTTTGGGCTCTTCACATCCACAGCCCAATTGGATAATGGGTGGCCTTTGCTTTGTTTTTCAATACCTTTGCAACTCCTTTTGGTACATTCTTCAGACCCAAATCATAAAAGTTTACCCAGATGAGGTAAGTGTGGTGGCAGTATACTACGTTATCCAGGCAGTTTTAACTGCCCCAATTTGTTTGATAGCAGAAACAGATATGAGCGCTTGGAAGCTAACAAATCCACTCAGTTTTCTTTTGATTTTCAACTCGGGTTTGATGGGGCAGTCTTTTGTGGCTGCCATTCACACATGGGGACTTAACTTGAAGGGACCTGTTTATGTGTCTAGTTTTAGGCCATTGTCCATTGCCATTGCAGCTGCTATGGGTGCCCTTCTCCTTGGTGATGATCTTCATCTTGGAAGTATAATTGGAGCAATCATAATATCAATTGGATTCTATGGCATATTGTGGGGAAAAGCAAAAGAAGAAGAATTGAAGGAATTAGATGGTGTTTGTGGGTTGGAATCTTCATCCAAAGCTCCATTGCTGCAATATTATAGAGTTGAAGATGCATAA 1098 44.44 MERSLFYKDVVPFAAMVAAECATVGSNTGFKAATARGISYYVFTLYVCMVAAAALVPFAVIFHKSPELPPNRISFFFKIVCLSALGLFCQLLGNKGLEYSSPTLSSAISNLIPAFTFIMAVFFRMEKIDLKRSSSIVKIVGSTVSIAGALVVVLYKGPIVISNPYSHGPKELGLLYQNSPLGSSHPQPNWIMGGLCFVFQYLCNSFWYILQTQIIKVYPDEVSVVAVYYVIQAVLTAPICLIAETDMSAWKLTNPLSFLLIFNSGLMGQSFVAAIHTWGLNLKGPVYVSSFRPLSIAIAAAMGALLLGDDLHLGSIIGAIIISIGFYGILWGKAKEEELKELDGVCGLESSSKAPLLQYYRVEDA 365
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 28114747 28121878 + CmPI595203_10g022030.1 Cmu10g2203 427733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu10g2203 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 155 - -
Cmu10g2203 365 Pfam EamA-like transporter family 23 146 IPR000620 GO:0016020(InterPro)
Cmu10g2203 365 PANTHER WAT1-RELATED PROTEIN 14 341 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cmu10g2203 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 335 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu09g1806 Cmu-Chr9:34220602 Cmu10g2203 Cmu-Chr10:28114747 1.50E-77 dispersed
Cmu09g1807 Cmu-Chr9:34235840 Cmu10g2203 Cmu-Chr10:28114747 3.60E-49 dispersed
Cmu10g2203 Cmu-Chr10:28114747 Cmu11g1324 Cmu-Chr11:25447424 3.10E-43 dispersed
Cmu10g2202 Cmu-Chr10:28098525 Cmu10g2203 Cmu-Chr10:28114747 1.20E-121 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu10g2203 - - - 0.0