Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu10g2215 ATGGAGATTCTGAAGTTTCTCTTCATTCTTCTCTCTACGGCGGCGTTTTTGTCTCTATCGGAATCCGTTCCTCTCTCGGCGAATTACTACCAGAAATCCTGCCCGAGATTCAGTCAGATTATCCAAGATACAGTCACCAACAAGCAGATCACTAGCCCTTCCACCGCCGCCGGAACTCTTCGTCTCTTGCTCCACGACTGTCTTCCTAACGGCTGCGATGGCTCCGTCCTCATCTCCTCCACTCCCTTCAACAAAGCCGAGCGCGACGCCGACATCAACCTCTCTCTCCCAGGCGACGCCTTCGATGTTATTGTTCGGGCCAAGACCGCTCTCGAGCTCGCATGTCCCAACACCGTCTCCTGTGCTGACATTCTCGCCGTTGCCACTCGCGACCTCGTCACCATGGTTGGCGGACCTTACTACAATGTTCTCCTCGGTCGCAGAGATGGCCGAGTGTCTAAAGCTTCGACGATTCCTGGTGCTCTACCGAAAGCTTCCTCGCCGATTCCTCAGATTATTGATATTTTTAAAGCTCGGGGGTTTACTATCCAGGAAATGGTAGCGTTAAGTGGTGCTCATACGATTGGATTCTCGCATTGTAAGGAATTCAGCTCTCAGATCTATAATTATAGCAAGTCGTCTTCGTATGATTCGCAGTATAACCCTAGATTCGCGCAAGGATTGCAGAAGGCTTGTTCTGGTTTTGAAAAGAATCCTACATTATCGGTTTTCAATGACATTATGACTCCCAATAAATTTGATAACTCTTACTTCCAGAATCTGCCGAAGGGATTGGGGATCTTGCAGTCTGATCATGCGTTGTATAATGATTGGAGGACGAGGCCATTCGTAGAGGCGTATGCGGCAGATGAGAAAAAGTTCTTCAACGATTTTGCTCGGGCGATGGAGAAGTTGAGTAATTATAAAGTTGTGACAGGCAATCAAGGGGAGATTCGGCATAAGTGTGATGCGATTAATTGA 981 48.22 MEILKFLFILLSTAAFLSLSESVPLSANYYQKSCPRFSQIIQDTVTNKQITSPSTAAGTLRLLLHDCLPNGCDGSVLISSTPFNKAERDADINLSLPGDAFDVIVRAKTALELACPNTVSCADILAVATRDLVTMVGGPYYNVLLGRRDGRVSKASTIPGALPKASSPIPQIIDIFKARGFTIQEMVALSGAHTIGFSHCKEFSSQIYNYSKSSSYDSQYNPRFAQGLQKACSGFEKNPTLSVFNDIMTPNKFDNSYFQNLPKGLGILQSDHALYNDWRTRPFVEAYAADEKKFFNDFARAMEKLSNYKVVTGNQGEIRHKCDAIN 326
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 28284692 28285672 + CmPI595203_10g022150.1 Cmu10g2215 427745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu10g2215 326 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu10g2215 326 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu10g2215 326 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu10g2215 326 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu10g2215 326 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu10g2215 326 FunFam Peroxidase 28 168 - -
Cmu10g2215 326 CDD secretory_peroxidase 25 325 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cmu10g2215 326 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu10g2215 326 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu10g2215 326 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu10g2215 326 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu10g2215 326 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu10g2215 326 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu10g2215 326 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu10g2215 326 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu10g2215 326 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu10g2215 326 Pfam Peroxidase 42 290 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu10g2215 326 ProSiteProfiles Plant heme peroxidase family profile. 24 326 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu10g2215 326 PANTHER - 9 326 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu10g2215 326 FunFam Peroxidase 163 305 - -
Cmu10g2215 326 Gene3D Peroxidase, domain 2 163 305 - -
Cmu10g2215 326 SUPERFAMILY Heme-dependent peroxidases 25 326 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu10g2215 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Cmu10g2215 326 Gene3D - 28 326 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g1374 Cmu-Chr1:27216670 Cmu10g2215 Cmu-Chr10:28284692 3.50E-110 dispersed
Cmu10g2215 Cmu-Chr10:28284692 Cmu11g0774 Cmu-Chr11:8239138 1.80E-71 dispersed
Cmu10g2215 Cmu-Chr10:28284692 Cmu06g1720 Cmu-Chr6:28222000 4.70E-104 wgd
Cmu10g2215 Cmu-Chr10:28284692 Cmu09g1798 Cmu-Chr9:34143049 5.40E-132 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu10g2215 K00430 - csv:101219829 625.55