Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu10g2292 ATGGGGATTAAATTTTCAAAGCCAAATCAGGGGAAGGTGGATAACCTTAGTCTGCAACACCACCTGATCAATTATCTCTCGAAAAGCTTTTACATCCGGAACTTGGTATCCAAGCAAAGGAGGCGCATGCTTGTTGCTGGCTATGATCTTGACATGTCATACATCACTGATCATGTACTAGCAATGTCATTCCCTGCAGAACGTATGCGCGCAATGTATCGTAATCCCCTATGGCAGGTTAAGTCCGTACTGGACATGAGGCATCAAGGACATTACAAGATCTATAATCTCTGTATTGAAGAATCATATGATCCATCACATTTTCATGGGCGGGTGGAGTCGTTTCCTTTCGATGATAATCATGTTCCACCTCTACAGATGATCAAAATCTTCTGTGAAAATGTCTCTTCATGGCTATCGTCCCACCCAAAGAATATTGCGGTTATACATTGCATGGCTGGAAAAGGTCGAACAGGATTGATGGTCTGTGCCTACTTGGTTTACTGTGGCATGTCAGCGGAGGATGCACTTCAGCTGTATGCTCAGAGGCGGACGACCAATAACGAAGGAGTATCAATTCCAAGCCAACGACGGTACGTGGGCTACTGGTCAAAGTGCCTTTCCTTTCCCAAGGGAATTTATAATGGACCACCTGAGGTGAAGTTGCCCGAACCATGTAGGAGAGAGTTGCAGAGAATTCGTCTTTATGACACAGTTAACACTGAATCAATTTTCTTTGTGGTCTCAGAATTGCAGGAGGTTCCTTCTCAACTATATCGTCCATCTATGGAACTTACCAGGAATTGTTGCAGACAATTTAAGAGAGGATATGAGAGGAGTAACAGTCCTTGTTATTTTCTATCTTTTGTTGAAGGCGAAAATGAAGGGAACAAGTCCGAAGTAGAGCCCCATCTTATTGTTCAAATGGATACCGAGTGTTCCGCACTATACCACAAAACCTGCCTTGACTACAATTTCGAGAAGCCTCTACCACTAACTGGAGATGTTCGCATCATATTCTACGCAAAGATGTTTGGAGGGCGTCTCTTCTATGCTTGCTTCAACACAGCCTTCATTAAAAACAGCTTGCTACAGCTAAGGTTGCAGGATTTGGACAAAGTTGGGAAAAAGGGAAGGTCACTTTGTGGTCCTTCCTTCTGCTTGGAGTTGGTATTTGGTCCTGCCAATGCAAAACACTCGTTTTCGAATTCATCCGATGACGAAGATCCTCAAAATGATTTCTCTTAA 1248 43.43 MGIKFSKPNQGKVDNLSLQHHLINYLSKSFYIRNLVSKQRRRMLVAGYDLDMSYITDHVLAMSFPAERMRAMYRNPLWQVKSVLDMRHQGHYKIYNLCIEESYDPSHFHGRVESFPFDDNHVPPLQMIKIFCENVSSWLSSHPKNIAVIHCMAGKGRTGLMVCAYLVYCGMSAEDALQLYAQRRTTNNEGVSIPSQRRYVGYWSKCLSFPKGIYNGPPEVKLPEPCRRELQRIRLYDTVNTESIFFVVSELQEVPSQLYRPSMELTRNCCRQFKRGYERSNSPCYFLSFVEGENEGNKSEVEPHLIVQMDTECSALYHKTCLDYNFEKPLPLTGDVRIIFYAKMFGGRLFYACFNTAFIKNSLLQLRLQDLDKVGKKGRSLCGPSFCLELVFGPANAKHSFSNSSDDEDPQNDFS 415
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 29201787 29206091 + CmPI595203_10g022920.1 Cmu10g2292 427822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu10g2292 415 Pfam Swiss Army Knife protein, DSP-PTPase phosphatase domain 111 186 - -
Cmu10g2292 415 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 30 397 IPR051281 GO:0004725(PANTHER)|GO:0005829(PANTHER)|GO:0016311(PANTHER)|GO:0016314(PANTHER)|GO:0046856(PANTHER)
Cmu10g2292 415 SMART PTEN_C2_2 223 394 IPR014020 -
Cmu10g2292 415 FunFam Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN 28 210 - -
Cmu10g2292 415 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 129 184 IPR000387 GO:0016311(InterPro)
Cmu10g2292 415 ProSitePatterns Tyrosine specific protein phosphatases active site. 149 159 IPR016130 GO:0016311(InterPro)
Cmu10g2292 415 Gene3D - 284 397 - -
Cmu10g2292 415 ProSiteProfiles Phosphatase tensin-type domain profile. 41 210 IPR029023 -
Cmu10g2292 415 ProSiteProfiles C2 tensin-type domain profile. 241 395 IPR014020 -
Cmu10g2292 415 Pfam C2 domain of PTEN tumour-suppressor protein 314 393 IPR014020 -
Cmu10g2292 415 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 49 207 IPR029021 -
Cmu10g2292 415 CDD PTP_PTEN 51 205 IPR045101 GO:0016791(InterPro)
Cmu10g2292 415 Gene3D Protein tyrosine phosphatase superfamily 28 209 IPR029021 -
Cmu10g2292 415 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 292 394 IPR035892 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu10g2292 K01110 - csv:101212127 815.839