Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu10g2337 ATGGCGACACAGAAATCAACACCGCAAACTGTTCCGCATATGGATAAAACAGTGGGTTGTGTTTTTTTGGCGAATCGGTTTCAGTCTCCAGAATTCCATTTCCATGTTATTAACAAAAGCTCGAGAAGAATCCACGGCAACCCTCAGGAAGATTGCCAGAGTTTTCTTCGTTTAACTGAGTTTGAAGCTAAGTGCTATGTTCTTAAATCCAACAACCCCTGTAACACCCAAGGGTACATAGATTATCTTTACATTTTCTATTGTCAGTATGGAAGTTTTAGCATCCTGGGCTACACTCTGTTGTTTCTGTGGCTTCTTGTGTTGTTCTATCTTTTGGGTAATACTGCTTCTGAATACTTTTGCTCTTCCCTTGAGAGCTTGTCAAAATTGTTGAATCTATCCCCAACAATTGCTGGTGTTACTCTGCTTTCTCTTGGCAATGGGGCACCTGATGTTTTTGCCAGCCTTGTTGCTTTCATGGGGGATGGAACTAGTGATATTGGCTTGAATACTGTTCTCGGCGGAGCCTCGTTTGTTACCTGCGTCGTCGTTGGAATCATTAGCATTTTGCTGCGTCGGCAATGGATTAAGGTGAATAGGTCTGCCTTCATTCGAGATGTTTTGTTCTTCCTCTTGGTTCTTTTGTCTGTTTTCCTGATATTGCTTCATGGTCATATCAATCTGTGGGGTTCCATTGGCTTTTCTTCCATGTATATTATTTATGTTTTGGTTGTTTATGTCTCCCATGCCCAATGGTTGAGTTTTAGAAGTGAAATCTGTGAACCCCTTTTGAAAGAACCACCAAAGGATGAGTTTGAGGGTCGAAATGAACCACAGGACAACGGTGACGATGATGACAACAATGATGATGTTAGAATTGATGTATATGATCTCTGTTTTTGTCCAAGATTATCACCTTCTTGTCTTTTTTTCCTTCGGATTCTTGAGGTCCCTCTTTACTTGCCTAGAAGATTGACAATTCCAGCCATTGCTGAAGAAAACTGGTCTAGACCATTTGCTGTTGCTTCAGTGACATTGGCCCCCCTTCTCTTATCTCTTCTATGGACATTTCACGACCAGAGTGATCAACCGTCACAATCGAACCTTATCATCTGTGTCATCGCTTCGTTGCTTGGAGTTAGTTTTGGAATTGTTGCATTTGCAACGACTGAGAATTCAAGCCCACCAAAGAAGTGCCTGTTCCCTTGGCTTGCAGCTGGCTTCACCATGAGTTTAACATGGAGTTACATTGTAGCTCAGGAACTGGTAGGCCTATTAGTTTCACTTGGCTACATAATGGGTATAAGCCCTTCAATCCTAGGACTTACCTTCCTTGCTTGGGGAAACTCTCTAGGGGATTTGGTTACCAATGTGACCATGGCTTTGAACGGCGGGCAGCGAGGCGCCCAAATCGCCATATCCGGTTGCTACGCTGGCCCCATCTTCAACACTCTGTTCGGCCTTGGGATATCTCTTGTTGGCGCTTCGTGGAAGAAGTATCCGCAGCCGGTCGCCATCCCTCCCGACCCTTATGTCATGGAGACATTGGGGCTGTTGGTAGGAGGGTTGCTTTGGGCACTTGTGGCTTTGCCAAGGAGAGAGATGAGGCTTGATGCTGTCTTGGGAGGAGGCCTTCTGGCTATCTATTTAACCTCTTTGCTCTTAAGGCTTTTGCAAGCTTTTGGTTCTTCCCATTAG 1698 44.52 MATQKSTPQTVPHMDKTVGCVFLANRFQSPEFHFHVINKSSRRIHGNPQEDCQSFLRLTEFEAKCYVLKSNNPCNTQGYIDYLYIFYCQYGSFSILGYTLLFLWLLVLFYLLGNTASEYFCSSLESLSKLLNLSPTIAGVTLLSLGNGAPDVFASLVAFMGDGTSDIGLNTVLGGASFVTCVVVGIISILLRRQWIKVNRSAFIRDVLFFLLVLLSVFLILLHGHINLWGSIGFSSMYIIYVLVVYVSHAQWLSFRSEICEPLLKEPPKDEFEGRNEPQDNGDDDDNNDDVRIDVYDLCFCPRLSPSCLFFLRILEVPLYLPRRLTIPAIAEENWSRPFAVASVTLAPLLLSLLWTFHDQSDQPSQSNLIICVIASLLGVSFGIVAFATTENSSPPKKCLFPWLAAGFTMSLTWSYIVAQELVGLLVSLGYIMGISPSILGLTFLAWGNSLGDLVTNVTMALNGGQRGAQIAISGCYAGPIFNTLFGLGISLVGASWKKYPQPVAIPPDPYVMETLGLLVGGLLWALVALPRREMRLDAVLGGGLLAIYLTSLLLRLLQAFGSSH 565
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 29649757 29651837 - CmPI595203_10g023370.1 Cmu10g2337 427867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu10g2337 565 MobiDBLite consensus disorder prediction 267 288 - -
Cmu10g2337 565 Pfam Sodium/calcium exchanger protein 404 557 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
Cmu10g2337 565 Pfam Sodium/calcium exchanger protein 102 246 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
Cmu10g2337 565 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 39 563 IPR051359 GO:0006812(PANTHER)|GO:0008324(PANTHER)|GO:0016020(PANTHER)
Cmu10g2337 565 Gene3D - 339 557 IPR044880 -
Cmu10g2337 565 Gene3D - 133 259 IPR044880 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu03g2275 Cmu-Chr3:31464098 Cmu10g2337 Cmu-Chr10:29649757 1.30E-48 dispersed
Cmu10g2337 Cmu-Chr10:29649757 Cmu03g2100 Cmu-Chr3:29429315 1.50E-97 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu10g2337 K13754 - csv:101204766 929.472