Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu10g2370 | ATGAGGAAAGAGGGAGGGTTTATGAAGAAAATGGGAAAGTCAATATGGTTCAAAGTTTTGGTGGGCTTTTTTGGTTTTGAGCTCATCGATGAGTTGGAAGCTGGGGAGTTGATAGCTGAAGTTTTGATAACAGTGAAGATTGGTGCAGACGATTTAAAAAAAACGGTGAACGGGATGCCTAGCTTCGTTTCTTCGATGCCCACAGCCAATAATTCCATGGGTGCAGAGGGGAGCTCTATTCCTTCATCTCGGATTTCAGACTTTAGAACACTTGAGCAAACTCTTGGATTTCACATAGAAGATGTAGACCTTACTAGAAATCCTTTGTATAATCAGATAAAGTCCAGTAGTTCGACTCTGAACAACATCCAATTTGGTTCTTTAATTAAGCCACTTGCATCCACTGATGTAAATCTGCCAACTGCTGTCATGGGGTCTCGAACACTGCCATTACAGAAGGAGTCAAATCCAAATTTGGTTTCTACTTCTGGTGGTCCTCGTGAAAATTGGGGAGAGTCTAATATGGCAGATACCAGCACAAGAACTGATACCTCCACAGATGACACGGATGACAAAAGTCAAAGGCTTGACAAGGATCAAGGAAACTCACTTGCCGCATATGATTCTAGCAACAAATCAAAAGAAAAAACAGCAGATCAGAAGACCTTACGAAGGCTTGCTCAAAATCGCGAAGCTGCTAGAAAAAGCCGTTTAAGGAAAAAAGCATATGTGCAGCAGCTAGAAAGTAGCAGACTGAAGCTTACTCAACTTGAGCAAGAACTCCAGCGGGCCCGCCAGCAGGGTATATTTATTTCAAATTCTGGAGACCAAGCTCATTCAATGAGTGGGAATGGGGCCCTAGCATTCGATGTAGAATATTCACGTTGGTTAGAGGAGCATAACAGGCTGATGAATGAGCTTAGAGCTGCAGTAAATTCACATGCTGGTGACACTGAACTTCGTACTATTGTAGATAATGTGACTACACAGTTCGATGATATTTTCAGGTTGAAAGGCATTGCAGCCAAAGCTGATGTGTTCCACATCTTGTCAGGAATGTGGAAGACACCAGCAGAGCGGTGTTTCCTGTGGATTGGTGGCTTCCGTTCATCTGAGATCCTAAAGGCTTTAGATGTAATAAGCCTTGGTAAAAAATCAAGCTCTCTCTACCGACCTGTTGTTTTATTACTTGTCTATTTAATTATAGACCTTTCAATGTCATTTTCAACCATTATGGGTTACGAAGTGGTCGTCTATTCAGATGCTTTTAAGTTAGAGTTACCTTCTCGTAATGCCCGCCTACTTTTGCCACCTTTGAGCTCCACTCAGTCCTCCTCAGATGGTGACACCTCTGACTGTTCTTTCAAATTTTGGAAAGGCAGCAGGAAAGATTCTGAGTTTTCCATGGAACAGCTTCTTGTAAACCAATTAGAGCCTTTGGCTGAGCAGCAGCTAATGGGCATTTGCAACCTGCAACAATTATCACAACAGGCAGAGGATGCTCTCTCACAAGGAATGGATGCATTGCAGCAATCCTTGGCTGAAACATTGGCCAGTGCCACACCTGCAACGTCGGGATCGTCTGGGAATGTGGCAAATTATATGGGTCAAATGGCCATGGCAATGGGAAAGCTTGGAACTCTTGAAGGCTTCCTACGACAGGCTGATAATCTTCGTCAACAAACCCTTCAACAAATGCATCGCATATTGACAACCCGTCAATCAGCCCGTGCACTTCTTGCAATAAACGACTACTTCTCCCGTCTTAGAGCCCTCAGTTCTCTGTGGCTTGCACGGCCACGAGATTGA | 1809 | 43.73 | MRKEGGFMKKMGKSIWFKVLVGFFGFELIDELEAGELIAEVLITVKIGADDLKKTVNGMPSFVSSMPTANNSMGAEGSSIPSSRISDFRTLEQTLGFHIEDVDLTRNPLYNQIKSSSSTLNNIQFGSLIKPLASTDVNLPTAVMGSRTLPLQKESNPNLVSTSGGPRENWGESNMADTSTRTDTSTDDTDDKSQRLDKDQGNSLAAYDSSNKSKEKTADQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISNSGDQAHSMSGNGALAFDVEYSRWLEEHNRLMNELRAAVNSHAGDTELRTIVDNVTTQFDDIFRLKGIAAKADVFHILSGMWKTPAERCFLWIGGFRSSEILKALDVISLGKKSSSLYRPVVLLLVYLIIDLSMSFSTIMGYEVVVYSDAFKLELPSRNARLLLPPLSSTQSSSDGDTSDCSFKFWKGSRKDSEFSMEQLLVNQLEPLAEQQLMGICNLQQLSQQAEDALSQGMDALQQSLAETLASATPATSGSSGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDYFSRLRALSSLWLARPRD | 602 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 30140364 | 30148774 | + | CmPI595203_10g023700.1 | Cmu10g2370 | 427900 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu10g2370 | 602 | SUPERFAMILY | Leucine zipper domain | 221 | 264 | IPR046347 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cmu10g2370 | 602 | Gene3D | - | 220 | 272 | - | - | |
Cmu10g2370 | 602 | Pfam | Seed dormancy control | 304 | 377 | IPR025422 | GO:0006351(InterPro)|GO:0043565(InterPro) | |
Cmu10g2370 | 602 | SMART | brlzneu | 217 | 280 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cmu10g2370 | 602 | CDD | bZIP_HBP1b-like | 221 | 272 | - | - | |
Cmu10g2370 | 602 | ProSiteProfiles | DOG1 domain profile. | 286 | 599 | IPR025422 | GO:0006351(InterPro)|GO:0043565(InterPro) | |
Cmu10g2370 | 602 | MobiDBLite | consensus disorder prediction | 183 | 198 | - | - | |
Cmu10g2370 | 602 | Pfam | bZIP transcription factor | 220 | 261 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cmu10g2370 | 602 | Coils | Coil | 240 | 267 | - | - | |
Cmu10g2370 | 602 | MobiDBLite | consensus disorder prediction | 148 | 222 | - | - | |
Cmu10g2370 | 602 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 219 | 263 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cmu10g2370 | 602 | PANTHER | TRANSCRIPTION FACTOR TGA9 | 179 | 377 | - | - | |
Cmu10g2370 | 602 | FunFam | BZIP family transcription factor | 220 | 269 | - | - | |
Cmu10g2370 | 602 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 224 | 239 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cmu10g2370 | 602 | MobiDBLite | consensus disorder prediction | 148 | 182 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu08g1013 | Cmu-Chr8:22364478 | Cmu10g2370 | Cmu-Chr10:30140364 | 9.20E-122 | dispersed | |
Cmu10g2370 | Cmu-Chr10:30140364 | Cmu10g2471 | Cmu-Chr10:31315563 | 3.20E-74 | dispersed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
7022 | PF14144 | DOG1 | 1.10E-28 | No_clan | Cmu | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu10g2370 | K14431 | - | csv:101219149 | 610.527 |