Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu10g2374 ATGGGAAAGAGTGAAGAAGAACAGCCGCTGCCGGTTGGAGTGAGCTCCTCTGAGCTTTCTGACCGGAATGTGGAGAGCAGATGCGGCGGCGGTGGGTGCTCTGGGATTCGTAGACTGATTGCGGTGAGATGTGTCTTCTTCCTGTTATTATCGGCGGCTGTGTTTCTTTCTGCTATTTTTTGGCTGCCACCGTTCCTTTCCGATGGAAATTGGCCGGATCGGCCTATTGATTCTGCTTATAGAGATCATGAAATAGTAGCAAGTTTTCATGCTTGGAAGCCAGTTCCTTTTATGGAAAACCATATTTTTGAGCTTGAGGATAACATTTTTGGAGAAATACCCGTACCATTTGTCAAGGTGGTTATCCTCTCACTACAATCATTAGGTGGACCAAACGTAACAAAAATTGTTTTTGCGGTAGATTCTGATGCAAAGTATTCAAAAATTCCCCCAACATCTCAAAGTTTAATCAAGGATACCTTTGAAACATTGGTTATAAATGAACCTCCTCTGAGATTGAATGCATCATTATTCGGCAATACATCCTTATTCGAGGTGTTGAAATTTCCTGGAGGAATAACTATTATTCCTCCTCAGAGTGCATTTCCTCTGCAGGCGGCACAGATCTATTTCAACTTCACATTAAATTATTCTATTTATCAAATTCAAGTGAATTTTGATGATCTTACCAGCCAGTTGAGGTCAGGATTACATCTATCTCCTTATGAGAATTTGTATGTTAGCCTATCGAACAAAAGAGGTTCAACAATACATTCCCCCACTATTGTCCAGTCATCTGTTCTGATGGCAATTGGGACTAACTCATCGAAACAAAGGCTAAAACAGTTGGCTCAAACCATCACAAATTCTCATTCAGGAAACCTTGGCCTGAACAACACTGTATTTGGTAAGGTCAAGCAGGTGCGTCTTTCATCAGTCCTAAACCACTCTCTTGGTGGTGGTGGCAGTGCTCGGTCACCTTCACGTGCGCCTCTGCCTCATTCTCACCACCATCACCACCACCATCACCACCACCATCACCACCATCACCACCATTACCACCATCACCACCACCACCACAATCAGGATGCTGCATACTCACCTAGTCCTGGAACAGAGGAGCACAAACATGCACTGAAGAATGGGGTCTCATCTGCTCCCGAAGCTGGTTCATCTCCAGTGGAAAGTCCAACTGCAAATAAAAGAAACTATGAAGCTACTCCGCCTGCTTTTCAATATGGATATAAGAGGTCTTCAAGAAAAGTCAGAAAACAATCTCATTTAGGCCCTATTCCTTCTCGAAGCAGTCCTCCATTGTCACCATTCTTACGAGTAGGCCTGCCAGCACCTGTTTCTGATTCTATTTCTGCTTCAAGTCCACTGTCAGGTGTAGTTCTATCTAGTGTACAGTCTCCAAATACAGGCAGTGGACATGCAGAAAATTTTGAAAGAAGTCCCCCTTCAGTCTTACCACCTCAATTTTCTTGCATGTGCGAAAATTGTGGGAGAGAGTTCTTGAAATCCAACCAATGTTTGCCTGGAACTAATTTTGCTCCAATGATTACACAGAGGCACAAGGCTGCAACTGTTACAGTTTCTGATGGAAAGTGTTCGTGTTTATACCATTCGATGGACACTTGCGCTATTTCTACTAGTATGATCAAGCAAGTTGGGAGATGCACTTTCCAGGTCAAAGTCACAGAGGTGGCAGGCCTTTGTTCCTTCTTCTTCTCTGCCATGGCGATCAACATCGTTGACCATCAAGTTCCCTCCGATTCCCACAATTTGTTCGACGTAACTTTCGATTCCGAGGAGCCAATTCTCACTCTTCTCACCACTTCACCATCCATGGTAGATGATTGGATATCCGAAACCCTCGCCATTCGAACTCCACCTCTCATCGTCGGCCTCGACATCGAATGGCGCCCTAATAATCGGTCCTACGACAACCCCGTCGCCACCTTGCAACTCTGCATCGGCCGCCGCTGCCTGATTCTGCAACTGATCCACACACCTGAGATCCCTAAATCTCTGTTCGAGTTTCTGGAAAACGAATCCTACACATTCGTAGGAGTGGGAATCGACGAGGATGCTGAAAAGCTCACCTGTGATTACGGATTGAAAGTGGGGAAGAGAGTGGATCTGAGGAATTTGGCTGAGAGTGTAACGGGAAGAGGAGATTTGAAGAATGCGGCATTGAAGAGATTGGGGAAAGAGGTTTTGGGGAAAGAGATTGAAAAGCCGAAGAGGGTGACGCTGAGTAGATGGGATCAACAGTGGCTTACTCTTAATCAGGTTAAGTATGCTTGTATTGATGCCTTTTTTTCGTTTGAGATTGGAAGGTTTTTGCAATCTTCATCCTATTAA 2367 44.7 MGKSEEEQPLPVGVSSSELSDRNVESRCGGGGCSGIRRLIAVRCVFFLLLSAAVFLSAIFWLPPFLSDGNWPDRPIDSAYRDHEIVASFHAWKPVPFMENHIFELEDNIFGEIPVPFVKVVILSLQSLGGPNVTKIVFAVDSDAKYSKIPPTSQSLIKDTFETLVINEPPLRLNASLFGNTSLFEVLKFPGGITIIPPQSAFPLQAAQIYFNFTLNYSIYQIQVNFDDLTSQLRSGLHLSPYENLYVSLSNKRGSTIHSPTIVQSSVLMAIGTNSSKQRLKQLAQTITNSHSGNLGLNNTVFGKVKQVRLSSVLNHSLGGGGSARSPSRAPLPHSHHHHHHHHHHHHHHHHHYHHHHHHHNQDAAYSPSPGTEEHKHALKNGVSSAPEAGSSPVESPTANKRNYEATPPAFQYGYKRSSRKVRKQSHLGPIPSRSSPPLSPFLRVGLPAPVSDSISASSPLSGVVLSSVQSPNTGSGHAENFERSPPSVLPPQFSCMCENCGREFLKSNQCLPGTNFAPMITQRHKAATVTVSDGKCSCLYHSMDTCAISTSMIKQVGRCTFQVKVTEVAGLCSFFFSAMAINIVDHQVPSDSHNLFDVTFDSEEPILTLLTTSPSMVDDWISETLAIRTPPLIVGLDIEWRPNNRSYDNPVATLQLCIGRRCLILQLIHTPEIPKSLFEFLENESYTFVGVGIDEDAEKLTCDYGLKVGKRVDLRNLAESVTGRGDLKNAALKRLGKEVLGKEIEKPKRVTLSRWDQQWLTLNQVKYACIDAFFSFEIGRFLQSSSY 788
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 30169021 30177500 + CmPI595203_10g023740.1 Cmu10g2374 427904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu10g2374 788 MobiDBLite consensus disorder prediction 316 439 - -
Cmu10g2374 788 MobiDBLite consensus disorder prediction 1 26 - -
Cmu10g2374 788 MobiDBLite consensus disorder prediction 331 361 - -
Cmu10g2374 788 FunFam Werner Syndrome-like exonuclease 594 784 - -
Cmu10g2374 788 PANTHER F20B24.21 1 486 - -
Cmu10g2374 788 MobiDBLite consensus disorder prediction 385 405 - -
Cmu10g2374 788 CDD WRN_exo 612 781 - -
Cmu10g2374 788 SUPERFAMILY Ribonuclease H-like 621 784 IPR012337 -
Cmu10g2374 788 SMART 35exoneu6 615 784 IPR002562 GO:0003676(InterPro)|GO:0006139(InterPro)|GO:0008408(InterPro)
Cmu10g2374 788 Pfam 3'-5' exonuclease 618 784 IPR002562 GO:0003676(InterPro)|GO:0006139(InterPro)|GO:0008408(InterPro)
Cmu10g2374 788 Gene3D - 597 785 IPR036397 GO:0003676(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g1082 Cmu-Chr5:10220333 Cmu10g2374 Cmu-Chr10:30169021 9.50E-47 dispersed
Cmu10g2374 Cmu-Chr10:30169021 Cmu10g2375 Cmu-Chr10:30178886 9.80E-55 tandem
Cmu10g2374 Cmu-Chr10:30169021 Cmu04g0640 Cmu-Chr4:20270233 4.50E-100 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu10g2374 - - - 0.0