Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu10g2379 ATGTCATTCCTTTCAACAAAAAGTGTTTCCAAGTTTCTTGGAAAAGTTTCTGCCCTTTGCTTGATTGCATTAATGCCAAATCTGCTTATGGACATTGGATTAGTTGCAGTTGTATGGAAAAGTTTCTGCCCTCTGCTTGATTGCAATAATGCCAAATCTGCTGATGGACATCGGATTAGTTGCAGTTGTATGGGAACCCTGAGTCAAGGAACAGTCAAGTTTGTTTTCATTTTGAAGAGGAGGGACATTCCATGGGAGACATACATGACTACTAAACTTATCAGTGGAACAAGCCTTCAGCTGTTAAGGCGATATGATAACAGACCAGAGAGTTACAGGGCACAGTTGTTGGATGATGATGGTCCAGCATATGTTCGGGTATTTGTTAGCATTTTACGCGATATATTTAAGGAAGAAACAGTGGAATATGTTCTAGCATTAATCGATGAAATGCTTACAGCAAACCCAAAAAGAGCAAGATTGTTCCACGATCCTTCTCTTGCAAGCGAAGATGCTTATGAACCTTTCCTAAGATTGCTTTGGAAGGGAAATTGGTTCATACAGGAGAAGAGCTGTAAAATACTTGCTCTGATAGTGAGTGCTAGACAGAAAACTCATGATGGAAATTTTGCAAATGATGATGCCTTGAACTCCAAGAGCAAAATTACTACCATTGATGATGTTTTGGATGGACTGGTGAAATGGCTTTGTGCACAGCTGAAGAATCCTTCACATCCTAGTCGTGCTGTACAGACTTCTATCAATTGCCTTGCAACTCTGTTGAAAGAACCAAAGGTCAGATCCTCCTTCGTCCAGACAGATGGAGTGAAATTGCTTATTCCTTTGATTTCTCCTGCATCGACCCAACAATCTATTCAGCTTCTATATGAAACTTGTCTTTGTGTTTGGCTCTTATCATATTATGAGCCGGCAATTGAATTCTTGGCCACTTCTAGGACCCTTCCAAGACTCATCGATGTTGTCAAGAGTTCCACAAAAGAGAAGGTTGTCCGAGTTATTATTTTGACCTTGAGGAACTTACTCTACAAGGGGACATTTGGAGCTCAAATGGTGGGTCTTGGACTACCACAAGTTGTTCAAAGTTTGAAATCACAAGCCTGGAGTGATGAGGACCTTTTGGAGGCTTTGAATCAACTAGAAGAGGGGCTGAAAGAAAACATCAAGAAACTAAGTTCTTTCGACAAGTATAAGCAAGAAGTCCTTCTCGGGCATCTTGACTGGTCTCCCATGCACAAAGATGTAAATTTCTGGCGAGAAAATATTACAAGCTTCGAAGAGAACGACTTGAAGATATTGAGGGTCCTAATCACCATTCTGGACAGTTCCAGTGACCCAAGGGCTTTGGCAGTTGCTTGTTTTGATCTTTCACAGTTCATTCAACACCATCCAGCTGGGAGAGTTATAGTGACAGACCTCAAGGCCAAGGAAAGAGTGATGAAACTGATGAATCATGAGAATGCTGAGGTTACCAAATATGCCCTCCTTTGCATTCAAAGGCTCTTTCTAGGTGCCAAGTATGCTAGCTTTCTGCAGGCTTAA 1560 41.35 MSFLSTKSVSKFLGKVSALCLIALMPNLLMDIGLVAVVWKSFCPLLDCNNAKSADGHRISCSCMGTLSQGTVKFVFILKRRDIPWETYMTTKLISGTSLQLLRRYDNRPESYRAQLLDDDGPAYVRVFVSILRDIFKEETVEYVLALIDEMLTANPKRARLFHDPSLASEDAYEPFLRLLWKGNWFIQEKSCKILALIVSARQKTHDGNFANDDALNSKSKITTIDDVLDGLVKWLCAQLKNPSHPSRAVQTSINCLATLLKEPKVRSSFVQTDGVKLLIPLISPASTQQSIQLLYETCLCVWLLSYYEPAIEFLATSRTLPRLIDVVKSSTKEKVVRVIILTLRNLLYKGTFGAQMVGLGLPQVVQSLKSQAWSDEDLLEALNQLEEGLKENIKKLSSFDKYKQEVLLGHLDWSPMHKDVNFWRENITSFEENDLKILRVLITILDSSSDPRALAVACFDLSQFIQHHPAGRVIVTDLKAKERVMKLMNHENAEVTKYALLCIQRLFLGAKYASFLQA 519
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 30215705 30222150 + CmPI595203_10g023790.1 Cmu10g2379 427909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu10g2379 519 PIRSF V-ATP_synth_H 75 518 IPR004908 GO:0000221(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
Cmu10g2379 519 CDD VATPase_H 77 513 - -
Cmu10g2379 519 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 79 518 IPR004908 GO:0000221(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
Cmu10g2379 519 Gene3D - 410 511 IPR038497 -
Cmu10g2379 519 Gene3D - 77 398 IPR011989 -
Cmu10g2379 519 SUPERFAMILY ARM repeat 78 509 IPR016024 -
Cmu10g2379 519 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 465 472 IPR018506 GO:0020037(InterPro)
Cmu10g2379 519 FunFam V-type proton ATPase subunit H 410 511 - -
Cmu10g2379 519 Pfam V-ATPase subunit H 79 390 IPR004908 GO:0000221(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
Cmu10g2379 519 Pfam V-ATPase subunit H 396 508 IPR011987 GO:0000221(InterPro)|GO:1902600(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu10g2379 K02144 - csv:101217015 855.129